RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 RELL1Q8IUW5 271 aa3.92□□□□□ -1.78
SEC23A-207ENST00000554615 PIK3R5Q8WYR1 880 aa3.92□□□□□ -1.78
SEC23A-207ENST00000554615 LENG9Q96B70 501 aa3.92□□□□□ -1.78
SEC23A-207ENST00000554615 PNMA5Q96PV4 448 aa3.92□□□□□ -1.78
SEC23A-207ENST00000554615 ALG1Q9BT22 464 aa3.92□□□□□ -1.78
SEC23A-207ENST00000554615 IDI2Q9BXS1 227 aa3.92□□□□□ -1.78
SEC23A-207ENST00000554615 A1CFQ9NQ94 594 aaKnown RBP3.92□□□□□ -1.78
SEC23A-207ENST00000554615 DMAC2Q9NW81 257 aa3.92□□□□□ -1.78
SEC23A-207ENST00000554615 STK17AQ9UEE5 414 aa3.92□□□□□ -1.78
SEC23A-207ENST00000554615 TTF2Q9UNY4 1162 aaKnown RBP3.92□□□□□ -1.78
SEC23A-207ENST00000554615 PCDHB6Q9Y5E3 794 aa3.92□□□□□ -1.78
SEC23A-207ENST00000554615 NFS1Q9Y697 457 aa3.92□□□□□ -1.78
SEC23A-207ENST00000554615 GRIN2DO15399 1336 aa3.92□□□□□ -1.78
SEC23A-207ENST00000554615 GRID2IPA4D2P6 1211 aa3.92□□□□□ -1.78
SEC23A-207ENST00000554615 SYF2O95926 243 aaKnown RBP3.92□□□□□ -1.78
SEC23A-207ENST00000554615 SLC3A2P08195 630 aaKnown RBP3.92□□□□□ -1.78
SEC23A-207ENST00000554615 HMGB2P26583 209 aaKnown RBP3.92□□□□□ -1.78
SEC23A-207ENST00000554615 TXLNAP40222 546 aa3.92□□□□□ -1.78
SEC23A-207ENST00000554615 GLE1Q53GS7 698 aaKnown RBP3.92□□□□□ -1.78
SEC23A-207ENST00000554615 TYW1BQ6NUM6 668 aa3.92□□□□□ -1.78
SEC23A-207ENST00000554615 FAM173BQ6P4H8 233 aa3.92□□□□□ -1.78
SEC23A-207ENST00000554615 POTEGQ6S5H5 508 aa3.92□□□□□ -1.78
SEC23A-207ENST00000554615 SRGAP1Q7Z6B7 1085 aa3.92□□□□□ -1.78
SEC23A-207ENST00000554615 REM2Q8IYK8 340 aaPredicted RBP3.92□□□□□ -1.78
SEC23A-207ENST00000554615 LARGE2Q8N3Y3 721 aa3.92□□□□□ -1.78
SEC23A-207ENST00000554615 AOPEPQ8N6M6 819 aa3.92□□□□□ -1.78
SEC23A-207ENST00000554615 NYXQ9GZU5 481 aa3.92□□□□□ -1.78
SEC23A-207ENST00000554615 GANQ9H2C0 597 aa3.92□□□□□ -1.78
SEC23A-207ENST00000554615 TRAF3IP3Q9Y228 551 aa3.92□□□□□ -1.78
SEC23A-207ENST00000554615 STK24Q9Y6E0 443 aa3.92□□□□□ -1.78
SEC23A-207ENST00000554615 KIF26AQ9ULI4 1882 aaPredicted RBP3.92□□□□□ -1.78
SEC23A-207ENST00000554615 SMCHD1A6NHR9 2005 aa3.92□□□□□ -1.78
SEC23A-207ENST00000554615 NYNRINQ9P2P1 1898 aaKnown RBP3.92□□□□□ -1.78
SEC23A-207ENST00000554615 LOC102724428A0A0B4J2F2 783 aa3.92□□□□□ -1.78
SEC23A-207ENST00000554615 TMEM232C9JQI7 657 aa3.92□□□□□ -1.78
SEC23A-207ENST00000554615 ZNF263O14978 683 aa3.92□□□□□ -1.78
SEC23A-207ENST00000554615 MYCNP04198 464 aaPredicted RBP3.92□□□□□ -1.78
SEC23A-207ENST00000554615 SFPQP23246 707 aaKnown RBP eCLIP3.92□□□□□ -1.78
SEC23A-207ENST00000554615 SIK1P57059 783 aa3.92□□□□□ -1.78
SEC23A-207ENST00000554615 SSRP1Q08945 709 aaKnown RBP3.92□□□□□ -1.78
SEC23A-207ENST00000554615 MKRN4PQ13434 485 aaPredicted RBP3.92□□□□□ -1.78
SEC23A-207ENST00000554615 RASA3Q14644 834 aa3.92□□□□□ -1.78
SEC23A-207ENST00000554615 CCDC57Q2TAC2 916 aa3.92□□□□□ -1.78
SEC23A-207ENST00000554615 SLC27A3Q5K4L6 730 aa3.92□□□□□ -1.78
SEC23A-207ENST00000554615 SLC9A9Q8IVB4 645 aa3.92□□□□□ -1.78
SEC23A-207ENST00000554615 GPR88Q9GZN0 384 aa3.92□□□□□ -1.78
SEC23A-207ENST00000554615 CSRNP2Q9H175 543 aa3.92□□□□□ -1.78
SEC23A-207ENST00000554615 NCOA5Q9HCD5 579 aaKnown RBP3.92□□□□□ -1.78
SEC23A-207ENST00000554615 SIX2Q9NPC8 291 aa3.92□□□□□ -1.78
SEC23A-207ENST00000554615 DISC1Q9NRI5 854 aa3.92□□□□□ -1.78
SEC23A-207ENST00000554615 PLAGL2Q9UPG8 496 aa3.92□□□□□ -1.78
SEC23A-207ENST00000554615 MYLKQ15746 1914 aa3.91□□□□□ -1.78
SEC23A-207ENST00000554615 GOLGA8BA8MQT2 603 aa3.91□□□□□ -1.78
SEC23A-207ENST00000554615 SKILP12757 684 aa3.91□□□□□ -1.78
SEC23A-207ENST00000554615 NCLP19338 710 aaKnown RBP3.91□□□□□ -1.78
SEC23A-207ENST00000554615 KRT2P35908 639 aa3.91□□□□□ -1.78
SEC23A-207ENST00000554615 SYKP43405 635 aa3.91□□□□□ -1.78
SEC23A-207ENST00000554615 GSCP56915 257 aaPredicted RBP3.91□□□□□ -1.78
SEC23A-207ENST00000554615 SPDYAQ5MJ70 313 aa3.91□□□□□ -1.78
SEC23A-207ENST00000554615 TMTC1Q8IUR5 882 aa3.91□□□□□ -1.78
SEC23A-207ENST00000554615 LRRC57Q8N9N7 239 aa3.91□□□□□ -1.78
SEC23A-207ENST00000554615 ETNPPLQ8TBG4 499 aa3.91□□□□□ -1.78
SEC23A-207ENST00000554615 OXER1Q8TDS5 423 aa3.91□□□□□ -1.78
SEC23A-207ENST00000554615 NUP58Q9BVL2 599 aa3.91□□□□□ -1.78
SEC23A-207ENST00000554615 RNF14Q9UBS8 474 aa3.91□□□□□ -1.78
SEC23A-207ENST00000554615 ZNF215Q9UL58 517 aaPredicted RBP3.91□□□□□ -1.78
SEC23A-207ENST00000554615 TBC1D12O60347 775 aa3.91□□□□□ -1.78
SEC23A-207ENST00000554615 TNKSO95271 1327 aa3.91□□□□□ -1.78
SEC23A-207ENST00000554615 LYPLA2O95372 231 aa3.91□□□□□ -1.78
SEC23A-207ENST00000554615 SCG2P13521 617 aa3.91□□□□□ -1.78
SEC23A-207ENST00000554615 TNNT1P13805 278 aa3.91□□□□□ -1.78
SEC23A-207ENST00000554615 HOXD13P35453 343 aa3.91□□□□□ -1.78
SEC23A-207ENST00000554615 SNRPFP62306 86 aaKnown RBP3.91□□□□□ -1.78
SEC23A-207ENST00000554615 SPAG1Q07617 926 aa3.91□□□□□ -1.78
SEC23A-207ENST00000554615 TOGARAM2Q6ZUX3 1019 aa3.91□□□□□ -1.78
SEC23A-207ENST00000554615 NIPA1Q7RTP0 329 aa3.91□□□□□ -1.78
SEC23A-207ENST00000554615 DZIP3Q86Y13 1208 aaKnown RBP3.91□□□□□ -1.78
SEC23A-207ENST00000554615 MICALL1Q8N3F8 863 aa3.91□□□□□ -1.78
SEC23A-207ENST00000554615 RNF10Q8N5U6 811 aaKnown RBP3.91□□□□□ -1.78
SEC23A-207ENST00000554615 MB21D1Q8N884 522 aa3.91□□□□□ -1.78
SEC23A-207ENST00000554615 MAGEC3Q8TD91 643 aa3.91□□□□□ -1.78
SEC23A-207ENST00000554615 CEP63Q96MT8 703 aa3.91□□□□□ -1.78
SEC23A-207ENST00000554615 PHACTR1Q9C0D0 580 aa3.91□□□□□ -1.78
SEC23A-207ENST00000554615 RIC8AQ9NPQ8 531 aa3.91□□□□□ -1.78
SEC23A-207ENST00000554615 FOXD4L1Q9NU39 408 aa3.91□□□□□ -1.78
SEC23A-207ENST00000554615 CDC23Q9UJX2 597 aa3.91□□□□□ -1.78
SEC23A-207ENST00000554615 R3HCC1Q9Y3T6 440 aaKnown RBP3.91□□□□□ -1.78
SEC23A-207ENST00000554615 SCN8AQ9UQD0 1980 aa3.91□□□□□ -1.78
SEC23A-207ENST00000554615 ZSCAN12O43309 604 aa3.91□□□□□ -1.78
SEC23A-207ENST00000554615 ATP1A3P13637 1013 aa3.91□□□□□ -1.78
SEC23A-207ENST00000554615 MYL6BP14649 208 aa3.91□□□□□ -1.78
SEC23A-207ENST00000554615 USP14P54578 494 aa3.91□□□□□ -1.78
SEC23A-207ENST00000554615 MAP3K12Q12852 859 aa3.91□□□□□ -1.78
SEC23A-207ENST00000554615 GRB10Q13322 594 aa3.91□□□□□ -1.78
SEC23A-207ENST00000554615 GRAPQ13588 217 aa3.91□□□□□ -1.78
SEC23A-207ENST00000554615 CYP1B1Q16678 543 aa3.91□□□□□ -1.78
SEC23A-207ENST00000554615 CCDC96Q2M329 555 aa3.91□□□□□ -1.78
SEC23A-207ENST00000554615 EDRF1Q3B7T1 1238 aa3.91□□□□□ -1.78
SEC23A-207ENST00000554615 ZC3H12AQ5D1E8 599 aaKnown RBP3.91□□□□□ -1.78
SEC23A-207ENST00000554615 C6orf89Q6UWU4 347 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms