RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 IVLP07476 585 aa3.63□□□□□ -1.83
SYNE2-212ENST00000554584 YWHAHQ04917 246 aaPredicted RBP3.63□□□□□ -1.83
SYNE2-212ENST00000554584 TRIM50Q86XT4 487 aa3.63□□□□□ -1.83
SYNE2-212ENST00000554584 SDR42E1Q8WUS8 393 aa3.63□□□□□ -1.83
SYNE2-212ENST00000554584 RBM8AQ9Y5S9 174 aaKnown RBP3.63□□□□□ -1.83
SYNE2-212ENST00000554584 ARHGEF11O15085 1522 aa3.63□□□□□ -1.83
SYNE2-212ENST00000554584 GCKP35557 465 aa3.63□□□□□ -1.83
SYNE2-212ENST00000554584 CCDC183Q5T5S1 534 aa3.63□□□□□ -1.83
SYNE2-212ENST00000554584 PPP1R18Q6NYC8 613 aa3.63□□□□□ -1.83
SYNE2-212ENST00000554584 ZNF804AQ7Z570 1209 aa3.63□□□□□ -1.83
SYNE2-212ENST00000554584 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.63□□□□□ -1.83
SYNE2-212ENST00000554584 ATP6V1C2Q8NEY4 427 aa3.63□□□□□ -1.83
SYNE2-212ENST00000554584 FLCNQ8NFG4 579 aa3.63□□□□□ -1.83
SYNE2-212ENST00000554584 TAOK3Q9H2K8 898 aa3.63□□□□□ -1.83
SYNE2-212ENST00000554584 TRPC5Q9UL62 973 aaPredicted RBP3.63□□□□□ -1.83
SYNE2-212ENST00000554584 PAIP2BQ9ULR5 123 aaKnown RBP3.63□□□□□ -1.83
SYNE2-212ENST00000554584 MYH14Q7Z406 1995 aaKnown RBP3.63□□□□□ -1.83
SYNE2-212ENST00000554584 ECE1P42892 770 aa3.63□□□□□ -1.83
SYNE2-212ENST00000554584 METAP2P50579 478 aaKnown RBP eCLIP3.63□□□□□ -1.83
SYNE2-212ENST00000554584 NAALADL2Q58DX5 795 aa3.63□□□□□ -1.83
SYNE2-212ENST00000554584 ANKS4BQ8N8V4 417 aa3.63□□□□□ -1.83
SYNE2-212ENST00000554584 ZSCAN31Q96LW9 406 aaPredicted RBP3.63□□□□□ -1.83
SYNE2-212ENST00000554584 CCDC77Q9BR77 488 aa3.63□□□□□ -1.83
SYNE2-212ENST00000554584 TRIOBPQ9H2D6 2365 aa3.63□□□□□ -1.83
SYNE2-212ENST00000554584 TRIP13Q15645 432 aaPredicted RBP3.63□□□□□ -1.83
SYNE2-212ENST00000554584 INTS8Q75QN2 995 aaKnown RBP3.63□□□□□ -1.83
SYNE2-212ENST00000554584 CPLX4Q7Z7G2 160 aa3.63□□□□□ -1.83
SYNE2-212ENST00000554584 PHACTR3Q96KR7 559 aa3.63□□□□□ -1.83
SYNE2-212ENST00000554584 RERGLQ9H628 205 aa3.63□□□□□ -1.83
SYNE2-212ENST00000554584 SNUPNO95149 360 aaKnown RBP3.63□□□□□ -1.83
SYNE2-212ENST00000554584 SYF2O95926 243 aaKnown RBP3.63□□□□□ -1.83
SYNE2-212ENST00000554584 PMS1P54277 932 aaKnown RBP3.63□□□□□ -1.83
SYNE2-212ENST00000554584 TOMM20Q15388 145 aa3.63□□□□□ -1.83
SYNE2-212ENST00000554584 PI16Q6UXB8 463 aa3.63□□□□□ -1.83
SYNE2-212ENST00000554584 ARHGAP18Q8N392 663 aa3.63□□□□□ -1.83
SYNE2-212ENST00000554584 FAM149B1Q96BN6 582 aa3.63□□□□□ -1.83
SYNE2-212ENST00000554584 EXO5Q9H790 373 aa3.63□□□□□ -1.83
SYNE2-212ENST00000554584 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.63□□□□□ -1.83
SYNE2-212ENST00000554584 DNAI1Q9UI46 699 aa3.63□□□□□ -1.83
SYNE2-212ENST00000554584 GMFGO60234 142 aa3.63□□□□□ -1.83
SYNE2-212ENST00000554584 DLATP10515 647 aaKnown RBP3.63□□□□□ -1.83
SYNE2-212ENST00000554584 ACTN1P12814 892 aa3.63□□□□□ -1.83
SYNE2-212ENST00000554584 EPHB1P54762 984 aa3.63□□□□□ -1.83
SYNE2-212ENST00000554584 IQCA1Q86XH1 822 aa3.63□□□□□ -1.83
SYNE2-212ENST00000554584 DBNDD2Q9BQY9 259 aa3.63□□□□□ -1.83
SYNE2-212ENST00000554584 SPDYE5A6NIY4 337 aa3.63□□□□□ -1.83
SYNE2-212ENST00000554584 ZBED4O75132 1171 aa3.63□□□□□ -1.83
SYNE2-212ENST00000554584 AP1G2O75843 785 aa3.63□□□□□ -1.83
SYNE2-212ENST00000554584 SEL1L2Q5TEA6 688 aa3.63□□□□□ -1.83
SYNE2-212ENST00000554584 COPB1P53618 953 aaKnown RBP3.63□□□□□ -1.83
SYNE2-212ENST00000554584 BFSP1Q12934 665 aa3.63□□□□□ -1.83
SYNE2-212ENST00000554584 UBE2SQ16763 222 aa3.63□□□□□ -1.83
SYNE2-212ENST00000554584 MAIP1Q8WWC4 291 aa3.63□□□□□ -1.83
SYNE2-212ENST00000554584 TRAF5O00463 557 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 CCDC172P0C7W6 258 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 TBL3Q12788 808 aaKnown RBP3.62□□□□□ -1.83
SYNE2-212ENST00000554584 DDI2Q5TDH0 399 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 HHATQ5VTY9 493 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 GJA10Q969M2 543 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 PPP1R36Q96LQ0 422 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 RILPQ96NA2 401 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 MTERF2Q49AM1 385 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 USP48Q86UV5 1035 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 NCAPGQ9BPX3 1015 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 STIM2Q9P246 746 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 SEC16AO15027 2179 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 IQCMA0A1B0GVH7 501 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 H7C0C1 242 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 ENC1O14682 589 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 ATP5OP48047 213 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 YWHAGP61981 247 aaKnown RBP eCLIP3.62□□□□□ -1.83
SYNE2-212ENST00000554584 ASIC3Q9UHC3 531 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 SFI1A8K8P3 1242 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 NBNO60934 754 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 MOCS3O95396 460 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 CENPTQ96BT3 561 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 CTTNBP2NLQ9P2B4 639 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.62□□□□□ -1.83
SYNE2-212ENST00000554584 V9GY48 417 aaPredicted RBP3.62□□□□□ -1.83
SYNE2-212ENST00000554584 FMN1Q68DA7 1419 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 CEP104O60308 925 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 EGFRP00533 1210 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 ELF1P32519 619 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 B4GALNT4Q76KP1 1039 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 RSPH1Q8WYR4 309 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 COA7Q96BR5 231 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 TMEM106CQ9BVX2 250 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 ZNF277Q9NRM2 450 aaPredicted RBP3.62□□□□□ -1.83
SYNE2-212ENST00000554584 LRRIQ4A6NIV6 560 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 POTEB2H3BUK9 544 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 CLIC2O15247 247 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 OPHN1O60890 802 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 TBC1D8BQ0IIM8 1120 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 NXF1Q9UBU9 619 aaKnown RBP3.62□□□□□ -1.83
SYNE2-212ENST00000554584 ARHGEF35A5YM69 484 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 CETN3O15182 167 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 GTF3C1Q12789 2109 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 IWS1Q96ST2 819 aa3.62□□□□□ -1.83
SYNE2-212ENST00000554584 KIF2AO00139 706 aaPredicted RBP3.62□□□□□ -1.83
SYNE2-212ENST00000554584 DNM1Q05193 864 aaKnown RBP3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms