RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 ENAMQ9NRM1 1142 aa3.18□□□□□ -1.9
PRPF39-206ENST00000554429 MBIPQ9NS73 344 aa3.18□□□□□ -1.9
PRPF39-206ENST00000554429 MRGBPQ9NV56 204 aa3.18□□□□□ -1.9
PRPF39-206ENST00000554429 NSFL1CQ9UNZ2 370 aaKnown RBP3.18□□□□□ -1.9
PRPF39-206ENST00000554429 MRPS23Q9Y3D9 190 aaKnown RBP3.18□□□□□ -1.9
PRPF39-206ENST00000554429 C6orf229H3BNL8 230 aa3.17□□□□□ -1.9
PRPF39-206ENST00000554429 ELL2O00472 640 aaPredicted RBP3.17□□□□□ -1.9
PRPF39-206ENST00000554429 SCAMP3O14828 347 aaKnown RBP3.17□□□□□ -1.9
PRPF39-206ENST00000554429 COQ9O75208 318 aa3.17□□□□□ -1.9
PRPF39-206ENST00000554429 TRPA1O75762 1119 aa3.17□□□□□ -1.9
PRPF39-206ENST00000554429 IGKV5-2P06315 115 aa3.17□□□□□ -1.9
PRPF39-206ENST00000554429 EIF2S2P20042 333 aaKnown RBP3.17□□□□□ -1.9
PRPF39-206ENST00000554429 CDC27P30260 824 aa3.17□□□□□ -1.9
PRPF39-206ENST00000554429 CCT4P50991 539 aaKnown RBP3.17□□□□□ -1.9
PRPF39-206ENST00000554429 ARHGEF6Q15052 776 aa3.17□□□□□ -1.9
PRPF39-206ENST00000554429 HABP4Q5JVS0 413 aaKnown RBP3.17□□□□□ -1.9
PRPF39-206ENST00000554429 CCDC30Q5VVM6 783 aa3.17□□□□□ -1.9
PRPF39-206ENST00000554429 PDXDC1Q6P996 788 aa3.17□□□□□ -1.9
PRPF39-206ENST00000554429 OTOP1Q7RTM1 612 aa3.17□□□□□ -1.9
PRPF39-206ENST00000554429 C14orf80Q86SX3 495 aa3.17□□□□□ -1.9
PRPF39-206ENST00000554429 SNX32Q86XE0 403 aa3.17□□□□□ -1.9
PRPF39-206ENST00000554429 PGBD3Q8N328 593 aa3.17□□□□□ -1.9
PRPF39-206ENST00000554429 MYRIPQ8NFW9 859 aa3.17□□□□□ -1.9
PRPF39-206ENST00000554429 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.17□□□□□ -1.9
PRPF39-206ENST00000554429 CLIC5Q9NZA1 410 aa3.17□□□□□ -1.9
PRPF39-206ENST00000554429 ZMIZ1Q9ULJ6 1067 aa3.17□□□□□ -1.9
PRPF39-206ENST00000554429 UTYO14607 1347 aa3.17□□□□□ -1.9
PRPF39-206ENST00000554429 ASTN2O75129 1339 aaPredicted RBP3.17□□□□□ -1.9
PRPF39-206ENST00000554429 COL2A1P02458 1487 aaPredicted RBP3.17□□□□□ -1.9
PRPF39-206ENST00000554429 MAST2Q6P0Q8 1798 aa3.17□□□□□ -1.9
PRPF39-206ENST00000554429 PLXNB2O15031 1838 aa3.17□□□□□ -1.9
PRPF39-206ENST00000554429 FRMPD3Q5JV73 1810 aa3.17□□□□□ -1.9
PRPF39-206ENST00000554429 NEURL1BA8MQ27 555 aa3.17□□□□□ -1.9
PRPF39-206ENST00000554429 COBLO75128 1261 aa3.17□□□□□ -1.9
PRPF39-206ENST00000554429 TXKP42681 527 aa3.17□□□□□ -1.9
PRPF39-206ENST00000554429 PTPN12Q05209 780 aaKnown RBP3.17□□□□□ -1.9
PRPF39-206ENST00000554429 PPP2R5BQ15173 497 aa3.17□□□□□ -1.9
PRPF39-206ENST00000554429 SUPT20HL1Q3ZLR7 823 aa3.17□□□□□ -1.9
PRPF39-206ENST00000554429 SPECC1Q5M775 1068 aa3.17□□□□□ -1.9
PRPF39-206ENST00000554429 NUDT18Q6ZVK8 323 aa3.17□□□□□ -1.9
PRPF39-206ENST00000554429 LMNTD2Q8IXW0 634 aa3.17□□□□□ -1.9
PRPF39-206ENST00000554429 NDUFAF2Q8N183 169 aa3.17□□□□□ -1.9
PRPF39-206ENST00000554429 TMEM87AQ8NBN3 555 aa3.17□□□□□ -1.9
PRPF39-206ENST00000554429 VMP1Q96GC9 406 aa3.17□□□□□ -1.9
PRPF39-206ENST00000554429 ZNF333Q96JL9 665 aa3.17□□□□□ -1.9
PRPF39-206ENST00000554429 TMEM87BQ96K49 555 aa3.17□□□□□ -1.9
PRPF39-206ENST00000554429 BRINP2Q9C0B6 783 aa3.17□□□□□ -1.9
PRPF39-206ENST00000554429 SEC31BQ9NQW1 1179 aa3.17□□□□□ -1.9
PRPF39-206ENST00000554429 RBM28Q9NW13 759 aaKnown RBP3.17□□□□□ -1.9
PRPF39-206ENST00000554429 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.17□□□□□ -1.9
PRPF39-206ENST00000554429 ZSWIM8A7E2V4 1837 aa3.16□□□□□ -1.9
PRPF39-206ENST00000554429 PLIN1O60240 522 aa3.16□□□□□ -1.9
PRPF39-206ENST00000554429 ANXA1P04083 346 aa3.16□□□□□ -1.9
PRPF39-206ENST00000554429 PEX19P40855 299 aa3.16□□□□□ -1.9
PRPF39-206ENST00000554429 ZNF131P52739 623 aa3.16□□□□□ -1.9
PRPF39-206ENST00000554429 VAC14Q08AM6 782 aa3.16□□□□□ -1.9
PRPF39-206ENST00000554429 RAPGEF1Q13905 1077 aa3.16□□□□□ -1.9
PRPF39-206ENST00000554429 CDC37Q16543 378 aaPredicted RBP3.16□□□□□ -1.9
PRPF39-206ENST00000554429 INO80DQ53TQ3 878 aaPredicted RBP3.16□□□□□ -1.9
PRPF39-206ENST00000554429 NOL9Q5SY16 702 aaKnown RBP3.16□□□□□ -1.9
PRPF39-206ENST00000554429 OTUD7BQ6GQQ9 843 aa3.16□□□□□ -1.9
PRPF39-206ENST00000554429 MYO1HQ8N1T3 1032 aa3.16□□□□□ -1.9
PRPF39-206ENST00000554429 PPM1EQ8WY54 764 aa3.16□□□□□ -1.9
PRPF39-206ENST00000554429 CCSER2Q9H7U1 834 aa3.16□□□□□ -1.9
PRPF39-206ENST00000554429 POLG2Q9UHN1 485 aa3.16□□□□□ -1.9
PRPF39-206ENST00000554429 RABGAP1Q9Y3P9 1069 aa3.16□□□□□ -1.9
PRPF39-206ENST00000554429 ATAD5Q96QE3 1844 aa3.16□□□□□ -1.9
PRPF39-206ENST00000554429 PABPN1LA6NDY0 278 aaKnown RBP3.16□□□□□ -1.9
PRPF39-206ENST00000554429 GOLGA6L6A8MZA4 724 aa3.16□□□□□ -1.9
PRPF39-206ENST00000554429 UBE2Q2LH0YL09 131 aa3.16□□□□□ -1.9
PRPF39-206ENST00000554429 GOLGA6L22H0YM25 854 aa3.16□□□□□ -1.9
PRPF39-206ENST00000554429 J3QL48 77 aa3.16□□□□□ -1.9
PRPF39-206ENST00000554429 USP2O75604 605 aaPredicted RBP3.16□□□□□ -1.9
PRPF39-206ENST00000554429 RASA1P20936 1047 aa3.16□□□□□ -1.9
PRPF39-206ENST00000554429 FXR1P51114 621 aaKnown RBP eCLIP3.16□□□□□ -1.9
PRPF39-206ENST00000554429 SOX10P56693 466 aa3.16□□□□□ -1.9
PRPF39-206ENST00000554429 ZNF394Q53GI3 561 aa3.16□□□□□ -1.9
PRPF39-206ENST00000554429 SLC4A10Q6U841 1118 aa3.16□□□□□ -1.9
PRPF39-206ENST00000554429 RIC3Q7Z5B4 369 aa3.16□□□□□ -1.9
PRPF39-206ENST00000554429 JAMLQ86YT9 394 aa3.16□□□□□ -1.9
PRPF39-206ENST00000554429 SVOPQ8N4V2 548 aa3.16□□□□□ -1.9
PRPF39-206ENST00000554429 TTC13Q8NBP0 860 aa3.16□□□□□ -1.9
PRPF39-206ENST00000554429 PHC3Q8NDX5 983 aa3.16□□□□□ -1.9
PRPF39-206ENST00000554429 JARID2Q92833 1246 aaPredicted RBP3.16□□□□□ -1.9
PRPF39-206ENST00000554429 ZBTB9Q96C00 473 aa3.16□□□□□ -1.9
PRPF39-206ENST00000554429 TEPSINQ96N21 525 aa3.16□□□□□ -1.9
PRPF39-206ENST00000554429 APBA2Q99767 749 aa3.16□□□□□ -1.9
PRPF39-206ENST00000554429 DNAJC25Q9H1X3 360 aa3.16□□□□□ -1.9
PRPF39-206ENST00000554429 ZNF408Q9H9D4 720 aa3.16□□□□□ -1.9
PRPF39-206ENST00000554429 ARNT2Q9HBZ2 717 aa3.16□□□□□ -1.9
PRPF39-206ENST00000554429 ANKIB1Q9P2G1 1089 aa3.16□□□□□ -1.9
PRPF39-206ENST00000554429 FAM198AQ9UFP1 575 aa3.16□□□□□ -1.9
PRPF39-206ENST00000554429 USP25Q9UHP3 1055 aa3.16□□□□□ -1.9
PRPF39-206ENST00000554429 DAAM1Q9Y4D1 1078 aa3.16□□□□□ -1.9
PRPF39-206ENST00000554429 ZNF236Q9UL36 1845 aa3.16□□□□□ -1.9
PRPF39-206ENST00000554429 RFX7Q2KHR2 1363 aa3.16□□□□□ -1.9
PRPF39-206ENST00000554429 IGF2BP3O00425 579 aaKnown RBP eCLIP3.15□□□□□ -1.9
PRPF39-206ENST00000554429 CAPN5O15484 640 aaPredicted RBP3.15□□□□□ -1.9
PRPF39-206ENST00000554429 TBC1D8O95759 1140 aa3.15□□□□□ -1.9
PRPF39-206ENST00000554429 KRT18P05783 430 aaKnown RBP3.15□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms