RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 CXCL9Q07325 125 aa7.69□□□□□ -1.18
ATXN3-226ENST00000554350 SGO2Q562F6 1265 aa7.69□□□□□ -1.18
ATXN3-226ENST00000554350 GJD3Q8N144 294 aa7.69□□□□□ -1.18
ATXN3-226ENST00000554350 DEFB123Q8N688 67 aa7.69□□□□□ -1.18
ATXN3-226ENST00000554350 CCER1Q8TC90 406 aaPredicted RBP7.69□□□□□ -1.18
ATXN3-226ENST00000554350 SNX29Q8TEQ0 813 aa7.69□□□□□ -1.18
ATXN3-226ENST00000554350 NRSN2Q9GZP1 204 aa7.69□□□□□ -1.18
ATXN3-226ENST00000554350 CNOT7Q9UIV1 285 aaKnown RBP7.69□□□□□ -1.18
ATXN3-226ENST00000554350 HIF3AQ9Y2N7 669 aa7.69□□□□□ -1.18
ATXN3-226ENST00000554350 CLSPNQ9HAW4 1339 aa7.69□□□□□ -1.18
ATXN3-226ENST00000554350 SCN7AQ01118 1682 aa7.68□□□□□ -1.18
ATXN3-226ENST00000554350 SART1O43290 800 aaKnown RBP7.68□□□□□ -1.18
ATXN3-226ENST00000554350 ESRRAP11474 423 aaPredicted RBP7.68□□□□□ -1.18
ATXN3-226ENST00000554350 IKBKEQ14164 716 aa7.68□□□□□ -1.18
ATXN3-226ENST00000554350 TNIP1Q15025 636 aa7.68□□□□□ -1.18
ATXN3-226ENST00000554350 TBC1D10BQ4KMP7 808 aaPredicted RBP7.68□□□□□ -1.18
ATXN3-226ENST00000554350 AMOTQ4VCS5 1084 aa7.68□□□□□ -1.18
ATXN3-226ENST00000554350 OTOP1Q7RTM1 612 aa7.68□□□□□ -1.18
ATXN3-226ENST00000554350 TMX4Q9H1E5 349 aaPredicted RBP7.68□□□□□ -1.18
ATXN3-226ENST00000554350 KCNF1Q9H3M0 494 aa7.68□□□□□ -1.18
ATXN3-226ENST00000554350 SOX17Q9H6I2 414 aaPredicted RBP7.68□□□□□ -1.18
ATXN3-226ENST00000554350 SUGCTQ9HAC7 445 aa7.68□□□□□ -1.18
ATXN3-226ENST00000554350 RAPGEFL1Q9UHV5 662 aa7.68□□□□□ -1.18
ATXN3-226ENST00000554350 ZNRF3Q9ULT6 936 aa7.68□□□□□ -1.18
ATXN3-226ENST00000554350 RBBP6Q7Z6E9 1792 aaKnown RBP7.68□□□□□ -1.18
ATXN3-226ENST00000554350 METTL12A8MUP2 240 aa7.67□□□□□ -1.18
ATXN3-226ENST00000554350 EDN3P14138 238 aa7.67□□□□□ -1.18
ATXN3-226ENST00000554350 HOXA10P31260 410 aaPredicted RBP7.67□□□□□ -1.18
ATXN3-226ENST00000554350 EIF4A2Q14240 407 aaKnown RBP7.67□□□□□ -1.18
ATXN3-226ENST00000554350 FDX2Q6P4F2 183 aa7.67□□□□□ -1.18
ATXN3-226ENST00000554350 TPTE2Q6XPS3 522 aa7.67□□□□□ -1.18
ATXN3-226ENST00000554350 SHISA5Q8N114 240 aa7.67□□□□□ -1.18
ATXN3-226ENST00000554350 SMG8Q8ND04 991 aaKnown RBP7.67□□□□□ -1.18
ATXN3-226ENST00000554350 RPGRQ92834 1020 aaKnown RBP7.67□□□□□ -1.18
ATXN3-226ENST00000554350 FAM122AQ96E09 287 aa7.67□□□□□ -1.18
ATXN3-226ENST00000554350 CARD11Q9BXL7 1154 aa7.67□□□□□ -1.18
ATXN3-226ENST00000554350 CDHR2Q9BYE9 1310 aa7.67□□□□□ -1.18
ATXN3-226ENST00000554350 CAMTA2O94983 1202 aa7.66□□□□□ -1.18
ATXN3-226ENST00000554350 FAM13AO94988 1023 aa7.66□□□□□ -1.18
ATXN3-226ENST00000554350 MAP4P27816 1152 aaKnown RBP7.66□□□□□ -1.18
ATXN3-226ENST00000554350 ARL4DP49703 201 aa7.66□□□□□ -1.18
ATXN3-226ENST00000554350 SREBF2Q12772 1141 aa7.66□□□□□ -1.18
ATXN3-226ENST00000554350 Q7L0L9 218 aa7.66□□□□□ -1.18
ATXN3-226ENST00000554350 TTC5Q8N0Z6 440 aa7.66□□□□□ -1.18
ATXN3-226ENST00000554350 TTC16Q8NEE8 873 aa7.66□□□□□ -1.18
ATXN3-226ENST00000554350 R3HDMLQ9H3Y0 253 aa7.66□□□□□ -1.18
ATXN3-226ENST00000554350 SLC52A2Q9HAB3 445 aa7.66□□□□□ -1.18
ATXN3-226ENST00000554350 ZFYVE28Q9HCC9 887 aa7.66□□□□□ -1.18
ATXN3-226ENST00000554350 STXBP5LQ9Y2K9 1186 aa7.66□□□□□ -1.18
ATXN3-226ENST00000554350 PTPN22Q9Y2R2 807 aa7.66□□□□□ -1.18
ATXN3-226ENST00000554350 KIF20BQ96Q89 1820 aa7.66□□□□□ -1.18
ATXN3-226ENST00000554350 POLR2AP24928 1970 aaKnown RBP7.65□□□□□ -1.18
ATXN3-226ENST00000554350 PLA2G5P39877 138 aa7.65□□□□□ -1.18
ATXN3-226ENST00000554350 EHHADHQ08426 723 aa7.65□□□□□ -1.18
ATXN3-226ENST00000554350 ASAP3Q8TDY4 903 aa7.65□□□□□ -1.18
ATXN3-226ENST00000554350 ARMC5Q96C12 935 aa7.65□□□□□ -1.18
ATXN3-226ENST00000554350 CDCA5Q96FF9 252 aa7.65□□□□□ -1.18
ATXN3-226ENST00000554350 MFSD14AQ96MC6 490 aa7.65□□□□□ -1.18
ATXN3-226ENST00000554350 FMNL2Q96PY5 1086 aa7.65□□□□□ -1.18
ATXN3-226ENST00000554350 PUS7Q96PZ0 661 aaKnown RBP7.65□□□□□ -1.18
ATXN3-226ENST00000554350 USP26Q9BXU7 913 aa7.65□□□□□ -1.18
ATXN3-226ENST00000554350 KRTAP9-9Q9BYP9 154 aa7.65□□□□□ -1.18
ATXN3-226ENST00000554350 KRTAP9-4Q9BYQ2 154 aa7.65□□□□□ -1.18
ATXN3-226ENST00000554350 GOLGA2P5Q9HBQ8 144 aa7.65□□□□□ -1.18
ATXN3-226ENST00000554350 ANO2Q9NQ90 1003 aa7.65□□□□□ -1.18
ATXN3-226ENST00000554350 ZNF652Q9Y2D9 606 aa7.65□□□□□ -1.18
ATXN3-226ENST00000554350 SNED1Q8TER0 1413 aa7.64□□□□□ -1.19
ATXN3-226ENST00000554350 PRAMEF22A3QJZ6 481 aa7.64□□□□□ -1.19
ATXN3-226ENST00000554350 KLRG2A4D1S0 409 aaPredicted RBP7.64□□□□□ -1.19
ATXN3-226ENST00000554350 WTIPA6NIX2 430 aaPredicted RBP7.64□□□□□ -1.19
ATXN3-226ENST00000554350 WDR64B1ANS9 1081 aa7.64□□□□□ -1.19
ATXN3-226ENST00000554350 UBE2Q2LH0YL09 131 aa7.64□□□□□ -1.19
ATXN3-226ENST00000554350 F13BP05160 661 aa7.64□□□□□ -1.19
ATXN3-226ENST00000554350 POLR3DP05423 398 aaPredicted RBP7.64□□□□□ -1.19
ATXN3-226ENST00000554350 DRD2P14416 443 aa7.64□□□□□ -1.19
ATXN3-226ENST00000554350 GRIK1P39086 918 aa7.64□□□□□ -1.19
ATXN3-226ENST00000554350 USP5P45974 858 aa7.64□□□□□ -1.19
ATXN3-226ENST00000554350 TM4SF4P48230 202 aa7.64□□□□□ -1.19
ATXN3-226ENST00000554350 ZNF211Q13398 564 aaPredicted RBP7.64□□□□□ -1.19
ATXN3-226ENST00000554350 ECM1Q16610 540 aa7.64□□□□□ -1.19
ATXN3-226ENST00000554350 SLC9C1Q4G0N8 1177 aa7.64□□□□□ -1.19
ATXN3-226ENST00000554350 MOB2Q70IA6 237 aa7.64□□□□□ -1.19
ATXN3-226ENST00000554350 CD99L2Q8TCZ2 262 aa7.64□□□□□ -1.19
ATXN3-226ENST00000554350 ERO1AQ96HE7 468 aa7.64□□□□□ -1.19
ATXN3-226ENST00000554350 GGA3Q9NZ52 723 aa7.64□□□□□ -1.19
ATXN3-226ENST00000554350 NIP7Q9Y221 180 aaKnown RBP eCLIP7.64□□□□□ -1.19
ATXN3-226ENST00000554350 NR2E3Q9Y5X4 410 aa7.64□□□□□ -1.19
ATXN3-226ENST00000554350 GAS2O43903 313 aaKnown RBP7.63□□□□□ -1.19
ATXN3-226ENST00000554350 A1BGP04217 495 aa7.63□□□□□ -1.19
ATXN3-226ENST00000554350 CTSBP07858 339 aa7.63□□□□□ -1.19
ATXN3-226ENST00000554350 IL6STP40189 918 aaPredicted RBP7.63□□□□□ -1.19
ATXN3-226ENST00000554350 IRAK1P51617 712 aa7.63□□□□□ -1.19
ATXN3-226ENST00000554350 AAMPQ13685 434 aa7.63□□□□□ -1.19
ATXN3-226ENST00000554350 CDPF1Q6NVV7 123 aa7.63□□□□□ -1.19
ATXN3-226ENST00000554350 C12orf50Q8NA57 414 aaPredicted RBP7.63□□□□□ -1.19
ATXN3-226ENST00000554350 C2CD4AQ8NCU7 369 aaPredicted RBP7.63□□□□□ -1.19
ATXN3-226ENST00000554350 SUPT20HQ8NEM7 779 aa7.63□□□□□ -1.19
ATXN3-226ENST00000554350 HTATIP2Q9BUP3 242 aa7.63□□□□□ -1.19
ATXN3-226ENST00000554350 LGR6Q9HBX8 967 aa7.63□□□□□ -1.19
ATXN3-226ENST00000554350 MRC1P22897 1456 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms