RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 GPAA1O43292 621 aa10.51□□□□□ -0.73
TDP1-208ENST00000553989 ADAMTS4O75173 837 aa10.51□□□□□ -0.73
TDP1-208ENST00000553989 ZFYP08048 801 aaPredicted RBP10.51□□□□□ -0.73
TDP1-208ENST00000553989 C6orf222P0C671 652 aaPredicted RBP10.51□□□□□ -0.73
TDP1-208ENST00000553989 TSPY3P0CV98 308 aa10.51□□□□□ -0.73
TDP1-208ENST00000553989 TSPY8P0CW00 308 aa10.51□□□□□ -0.73
TDP1-208ENST00000553989 GNAT2P19087 354 aa10.51□□□□□ -0.73
TDP1-208ENST00000553989 ITGB8P26012 769 aa10.51□□□□□ -0.73
TDP1-208ENST00000553989 ACLYP53396 1101 aa10.51□□□□□ -0.73
TDP1-208ENST00000553989 LRRFIP1Q32MZ4 808 aaKnown RBP10.51□□□□□ -0.73
TDP1-208ENST00000553989 GIMAP6Q6P9H5 292 aa10.51□□□□□ -0.73
TDP1-208ENST00000553989 LRRC47Q8N1G4 583 aaKnown RBP10.51□□□□□ -0.73
TDP1-208ENST00000553989 EXOC6Q8TAG9 804 aa10.51□□□□□ -0.73
TDP1-208ENST00000553989 OSBP2Q969R2 916 aa10.51□□□□□ -0.73
TDP1-208ENST00000553989 GLT1D1Q96MS3 346 aa10.51□□□□□ -0.73
TDP1-208ENST00000553989 TSEN34Q9BSV6 310 aaKnown RBP10.51□□□□□ -0.73
TDP1-208ENST00000553989 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.51□□□□□ -0.73
TDP1-208ENST00000553989 NACAP1Q9BZK3 213 aa10.51□□□□□ -0.73
TDP1-208ENST00000553989 TSPYL2Q9H2G4 693 aaPredicted RBP10.51□□□□□ -0.73
TDP1-208ENST00000553989 HOMER2Q9NSB8 354 aa10.51□□□□□ -0.73
TDP1-208ENST00000553989 RIPK3Q9Y572 518 aa10.51□□□□□ -0.73
TDP1-208ENST00000553989 ZNFX1Q9P2E3 1918 aaKnown RBP10.5□□□□□ -0.73
TDP1-208ENST00000553989 KIAA0355O15063 1070 aa10.5□□□□□ -0.73
TDP1-208ENST00000553989 SNAI1O95863 264 aaPredicted RBP10.5□□□□□ -0.73
TDP1-208ENST00000553989 TTLL1O95922 423 aa10.5□□□□□ -0.73
TDP1-208ENST00000553989 SLC3A2P08195 630 aaKnown RBP10.5□□□□□ -0.73
TDP1-208ENST00000553989 PDE4BQ07343 736 aa10.5□□□□□ -0.73
TDP1-208ENST00000553989 PDAP1Q13442 181 aaKnown RBP10.5□□□□□ -0.73
TDP1-208ENST00000553989 KCNA10Q16322 511 aa10.5□□□□□ -0.73
TDP1-208ENST00000553989 C20orf194Q5TEA3 1177 aa10.5□□□□□ -0.73
TDP1-208ENST00000553989 NOL8Q76FK4 1167 aaKnown RBP10.5□□□□□ -0.73
TDP1-208ENST00000553989 PCSK9Q8NBP7 692 aaKnown RBP10.5□□□□□ -0.73
TDP1-208ENST00000553989 CHMP4CQ96CF2 233 aa10.5□□□□□ -0.73
TDP1-208ENST00000553989 CEP95Q96GE4 821 aa10.5□□□□□ -0.73
TDP1-208ENST00000553989 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.5□□□□□ -0.73
TDP1-208ENST00000553989 FBXO40Q9UH90 709 aa10.5□□□□□ -0.73
TDP1-208ENST00000553989 FEM1BQ9UK73 627 aa10.5□□□□□ -0.73
TDP1-208ENST00000553989 MROH7Q68CQ1 1323 aa10.5□□□□□ -0.73
TDP1-208ENST00000553989 SMCHD1A6NHR9 2005 aa10.5□□□□□ -0.73
TDP1-208ENST00000553989 DNAH12Q6ZR08 3092 aa10.49□□□□□ -0.73
TDP1-208ENST00000553989 MYADML2A6NDP7 307 aa10.49□□□□□ -0.73
TDP1-208ENST00000553989 M0R2C6 588 aa10.49□□□□□ -0.73
TDP1-208ENST00000553989 DUSP11O75319 330 aaKnown RBP10.49□□□□□ -0.73
TDP1-208ENST00000553989 EPHB4P54760 987 aa10.49□□□□□ -0.73
TDP1-208ENST00000553989 FAAP100Q0VG06 881 aa10.49□□□□□ -0.73
TDP1-208ENST00000553989 ACVR2BQ13705 512 aa10.49□□□□□ -0.73
TDP1-208ENST00000553989 SLFN13Q68D06 897 aa10.49□□□□□ -0.73
TDP1-208ENST00000553989 CCDC174Q6PII3 467 aa10.49□□□□□ -0.73
TDP1-208ENST00000553989 ARMCX2Q7L311 632 aa10.49□□□□□ -0.73
TDP1-208ENST00000553989 ANKRD33Q7Z3H0 272 aa10.49□□□□□ -0.73
TDP1-208ENST00000553989 CHST13Q8NET6 341 aa10.49□□□□□ -0.73
TDP1-208ENST00000553989 TOX2Q96NM4 488 aa10.49□□□□□ -0.73
TDP1-208ENST00000553989 FSD1Q9BTV5 496 aa10.49□□□□□ -0.73
TDP1-208ENST00000553989 NAPBQ9H115 298 aa10.49□□□□□ -0.73
TDP1-208ENST00000553989 TTYH1Q9H313 450 aaPredicted RBP10.49□□□□□ -0.73
TDP1-208ENST00000553989 ABHD16BQ9H3Z7 469 aa10.49□□□□□ -0.73
TDP1-208ENST00000553989 SLC38A10Q9HBR0 1119 aa10.49□□□□□ -0.73
TDP1-208ENST00000553989 EPB41L4AQ9HCS5 686 aaPredicted RBP10.49□□□□□ -0.73
TDP1-208ENST00000553989 MTMR4Q9NYA4 1195 aa10.49□□□□□ -0.73
TDP1-208ENST00000553989 GREB1LQ9C091 1923 aaPredicted RBP10.48□□□□□ -0.73
TDP1-208ENST00000553989 DNAJC25-GNG10A0A024R161 153 aa10.48□□□□□ -0.73
TDP1-208ENST00000553989 TMEM265A0A087WTH1 108 aa10.48□□□□□ -0.73
TDP1-208ENST00000553989 A0A0U1RQG5 324 aaPredicted RBP10.48□□□□□ -0.73
TDP1-208ENST00000553989 PATL2C9JE40 543 aaKnown RBP10.48□□□□□ -0.73
TDP1-208ENST00000553989 TMEM232C9JQI7 657 aa10.48□□□□□ -0.73
TDP1-208ENST00000553989 ATP2A1O14983 1001 aa10.48□□□□□ -0.73
TDP1-208ENST00000553989 TLR3O15455 904 aaKnown RBP10.48□□□□□ -0.73
TDP1-208ENST00000553989 TIMP1P01033 207 aa10.48□□□□□ -0.73
TDP1-208ENST00000553989 ASGR1P07306 291 aa10.48□□□□□ -0.73
TDP1-208ENST00000553989 BMP3P12645 472 aa10.48□□□□□ -0.73
TDP1-208ENST00000553989 DNAJB2P25686 324 aa10.48□□□□□ -0.73
TDP1-208ENST00000553989 SLC1A4P43007 532 aa10.48□□□□□ -0.73
TDP1-208ENST00000553989 STAT2P52630 851 aa10.48□□□□□ -0.73
TDP1-208ENST00000553989 OAZ1P54368 228 aa10.48□□□□□ -0.73
TDP1-208ENST00000553989 PPIGQ13427 754 aaKnown RBP eCLIP10.48□□□□□ -0.73
TDP1-208ENST00000553989 AAMPQ13685 434 aa10.48□□□□□ -0.73
TDP1-208ENST00000553989 CCDC144BQ3MJ40 725 aa10.48□□□□□ -0.73
TDP1-208ENST00000553989 GNASQ5JWF2 1037 aa10.48□□□□□ -0.73
TDP1-208ENST00000553989 MAMDC4Q6UXC1 1216 aa10.48□□□□□ -0.73
TDP1-208ENST00000553989 CCDC129Q6ZRS4 1044 aa10.48□□□□□ -0.73
TDP1-208ENST00000553989 IFNL3Q8IZI9 196 aa10.48□□□□□ -0.73
TDP1-208ENST00000553989 GMCL1P1Q8NEA9 526 aa10.48□□□□□ -0.73
TDP1-208ENST00000553989 KLHDC9Q8NEP7 349 aa10.48□□□□□ -0.73
TDP1-208ENST00000553989 PPP1R12CQ9BZL4 782 aa10.48□□□□□ -0.73
TDP1-208ENST00000553989 ACAD9Q9H845 621 aa10.48□□□□□ -0.73
TDP1-208ENST00000553989 FARP1Q9Y4F1 1045 aaPredicted RBP10.48□□□□□ -0.73
TDP1-208ENST00000553989 MYH4Q9Y623 1939 aa10.47□□□□□ -0.73
TDP1-208ENST00000553989 IGKV6D-41A0A0C4DH26 115 aa10.47□□□□□ -0.73
TDP1-208ENST00000553989 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.47□□□□□ -0.73
TDP1-208ENST00000553989 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.47□□□□□ -0.73
TDP1-208ENST00000553989 ERC2O15083 957 aa10.47□□□□□ -0.73
TDP1-208ENST00000553989 CST5P28325 142 aaPredicted RBP10.47□□□□□ -0.73
TDP1-208ENST00000553989 IRX5P78411 483 aaPredicted RBP10.47□□□□□ -0.73
TDP1-208ENST00000553989 TFAP4Q01664 338 aa10.47□□□□□ -0.73
TDP1-208ENST00000553989 CCDC144CPQ8IYA2 1237 aa10.47□□□□□ -0.73
TDP1-208ENST00000553989 TMEM199Q8N511 208 aa10.47□□□□□ -0.73
TDP1-208ENST00000553989 TIFAQ96CG3 184 aa10.47□□□□□ -0.73
TDP1-208ENST00000553989 DCTPP1Q9H773 170 aa10.47□□□□□ -0.73
TDP1-208ENST00000553989 RNF146Q9NTX7 359 aa10.47□□□□□ -0.73
TDP1-208ENST00000553989 SYNPO2Q9UMS6 1093 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms