RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 AMIGO3Q86WK7 504 aa8.33□□□□□ -1.08
ATXN3-223ENST00000553686 RNF214Q8ND24 703 aa8.33□□□□□ -1.08
ATXN3-223ENST00000553686 CTSHP09668 335 aa8.32□□□□□ -1.08
ATXN3-223ENST00000553686 HOXA10P31260 410 aaPredicted RBP8.32□□□□□ -1.08
ATXN3-223ENST00000553686 MAP3K11Q16584 847 aa8.32□□□□□ -1.08
ATXN3-223ENST00000553686 PPM1JQ5JR12 505 aa8.32□□□□□ -1.08
ATXN3-223ENST00000553686 OGFOD3Q6PK18 319 aa8.32□□□□□ -1.08
ATXN3-223ENST00000553686 GCC1Q96CN9 775 aa8.32□□□□□ -1.08
ATXN3-223ENST00000553686 METTL22Q9BUU2 404 aaPredicted RBP8.32□□□□□ -1.08
ATXN3-223ENST00000553686 BCL2L13Q9BXK5 485 aa8.32□□□□□ -1.08
ATXN3-223ENST00000553686 MRS2Q9HD23 443 aa8.32□□□□□ -1.08
ATXN3-223ENST00000553686 PICK1Q9NRD5 415 aa8.32□□□□□ -1.08
ATXN3-223ENST00000553686 CGNL1Q0VF96 1302 aa8.31□□□□□ -1.08
ATXN3-223ENST00000553686 BTAF1O14981 1849 aa8.31□□□□□ -1.08
ATXN3-223ENST00000553686 NEFMP07197 916 aa8.31□□□□□ -1.08
ATXN3-223ENST00000553686 CYP27A1Q02318 531 aa8.31□□□□□ -1.08
ATXN3-223ENST00000553686 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.31□□□□□ -1.08
ATXN3-223ENST00000553686 IP6K1Q92551 441 aa8.31□□□□□ -1.08
ATXN3-223ENST00000553686 ISL2Q96A47 359 aa8.31□□□□□ -1.08
ATXN3-223ENST00000553686 LTV1Q96GA3 475 aaPredicted RBP8.31□□□□□ -1.08
ATXN3-223ENST00000553686 USP31Q70CQ4 1352 aa8.31□□□□□ -1.08
ATXN3-223ENST00000553686 CENPJQ9HC77 1338 aaPredicted RBP8.3□□□□□ -1.08
ATXN3-223ENST00000553686 ITSN1Q15811 1721 aa8.3□□□□□ -1.08
ATXN3-223ENST00000553686 CYP26A1O43174 497 aa8.3□□□□□ -1.08
ATXN3-223ENST00000553686 FOSL1P15407 271 aa8.3□□□□□ -1.08
ATXN3-223ENST00000553686 RPS26P62854 115 aaKnown RBP8.3□□□□□ -1.08
ATXN3-223ENST00000553686 RING1Q06587 406 aa8.3□□□□□ -1.08
ATXN3-223ENST00000553686 CDK5R2Q13319 367 aa8.3□□□□□ -1.08
ATXN3-223ENST00000553686 INPP5AQ14642 412 aa8.3□□□□□ -1.08
ATXN3-223ENST00000553686 CPSF6Q16630 551 aaKnown RBP eCLIP8.3□□□□□ -1.08
ATXN3-223ENST00000553686 ZNF765Q7L2R6 523 aa8.3□□□□□ -1.08
ATXN3-223ENST00000553686 ELMO3Q96BJ8 720 aa8.3□□□□□ -1.08
ATXN3-223ENST00000553686 VTI1BQ9UEU0 232 aa8.3□□□□□ -1.08
ATXN3-223ENST00000553686 COL18A1P39060 1754 aa8.3□□□□□ -1.08
ATXN3-223ENST00000553686 EVC2Q86UK5 1308 aa8.29□□□□□ -1.08
ATXN3-223ENST00000553686 WDR33Q9C0J8 1336 aaKnown RBP8.29□□□□□ -1.08
ATXN3-223ENST00000553686 RASSF10A6NK89 507 aa8.29□□□□□ -1.08
ATXN3-223ENST00000553686 KIAA1324LA8MWY0 1029 aaPredicted RBP8.29□□□□□ -1.08
ATXN3-223ENST00000553686 RFC4P35249 363 aa8.29□□□□□ -1.08
ATXN3-223ENST00000553686 ST13P50502 369 aaKnown RBP8.29□□□□□ -1.08
ATXN3-223ENST00000553686 AGMOQ6ZNB7 445 aa8.29□□□□□ -1.08
ATXN3-223ENST00000553686 LDHDQ86WU2 507 aa8.29□□□□□ -1.08
ATXN3-223ENST00000553686 RAPGEF4Q8WZA2 1011 aa8.29□□□□□ -1.08
ATXN3-223ENST00000553686 MCOLN1Q9GZU1 580 aa8.29□□□□□ -1.08
ATXN3-223ENST00000553686 PCDHB5Q9Y5E4 795 aa8.29□□□□□ -1.08
ATXN3-223ENST00000553686 PASKQ96RG2 1323 aa8.29□□□□□ -1.08
ATXN3-223ENST00000553686 IQCA1LA6NCM1 817 aa8.28□□□□□ -1.08
ATXN3-223ENST00000553686 FANCGO15287 622 aa8.28□□□□□ -1.08
ATXN3-223ENST00000553686 CA12O43570 354 aa8.28□□□□□ -1.08
ATXN3-223ENST00000553686 RLBP1P12271 317 aa8.28□□□□□ -1.08
ATXN3-223ENST00000553686 ECE1P42892 770 aa8.28□□□□□ -1.08
ATXN3-223ENST00000553686 LIG3P49916 1009 aa8.28□□□□□ -1.08
ATXN3-223ENST00000553686 CYP27C1Q4G0S4 372 aa8.28□□□□□ -1.08
ATXN3-223ENST00000553686 LRFN4Q6PJG9 635 aa8.28□□□□□ -1.08
ATXN3-223ENST00000553686 CDC37L1Q7L3B6 337 aa8.28□□□□□ -1.08
ATXN3-223ENST00000553686 HDXQ7Z353 690 aa8.28□□□□□ -1.08
ATXN3-223ENST00000553686 DTX1Q86Y01 620 aa8.28□□□□□ -1.08
ATXN3-223ENST00000553686 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.28□□□□□ -1.08
ATXN3-223ENST00000553686 LINC00116Q8NCU8 138 aa8.28□□□□□ -1.08
ATXN3-223ENST00000553686 GIPC2Q8TF65 315 aa8.28□□□□□ -1.08
ATXN3-223ENST00000553686 NOC4LQ9BVI4 516 aaKnown RBP8.28□□□□□ -1.08
ATXN3-223ENST00000553686 LRRC4CQ9HCJ2 640 aa8.28□□□□□ -1.08
ATXN3-223ENST00000553686 FAM87AP0C7U9 286 aa8.27□□□□□ -1.09
ATXN3-223ENST00000553686 GYS1P13807 737 aa8.27□□□□□ -1.09
ATXN3-223ENST00000553686 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.27□□□□□ -1.09
ATXN3-223ENST00000553686 PIGBQ92521 554 aa8.27□□□□□ -1.09
ATXN3-223ENST00000553686 PLPPR2Q96GM1 343 aa8.27□□□□□ -1.09
ATXN3-223ENST00000553686 KTN1Q86UP2 1357 aaKnown RBP8.26□□□□□ -1.09
ATXN3-223ENST00000553686 SPINK2P20155 84 aa8.26□□□□□ -1.09
ATXN3-223ENST00000553686 CHRNA5P30532 468 aa8.26□□□□□ -1.09
ATXN3-223ENST00000553686 NTF4P34130 210 aa8.26□□□□□ -1.09
ATXN3-223ENST00000553686 CDK8P49336 464 aa8.26□□□□□ -1.09
ATXN3-223ENST00000553686 SEPT6Q14141 434 aa8.26□□□□□ -1.09
ATXN3-223ENST00000553686 ZBTB37Q5TC79 503 aa8.26□□□□□ -1.09
ATXN3-223ENST00000553686 CYFIP1Q7L576 1253 aa8.26□□□□□ -1.09
ATXN3-223ENST00000553686 ZNF507Q8TCN5 953 aa8.26□□□□□ -1.09
ATXN3-223ENST00000553686 JARID2Q92833 1246 aaPredicted RBP8.26□□□□□ -1.09
ATXN3-223ENST00000553686 GAL3ST3Q96A11 431 aa8.26□□□□□ -1.09
ATXN3-223ENST00000553686 CRELD1Q96HD1 420 aa8.26□□□□□ -1.09
ATXN3-223ENST00000553686 PSMG3-AS1Q96PY0 264 aa8.26□□□□□ -1.09
ATXN3-223ENST00000553686 ABT1Q9ULW3 272 aaKnown RBP8.26□□□□□ -1.09
ATXN3-223ENST00000553686 TLR6Q9Y2C9 796 aa8.26□□□□□ -1.09
ATXN3-223ENST00000553686 SNCAIPQ9Y6H5 919 aa8.26□□□□□ -1.09
ATXN3-223ENST00000553686 PCDH11XQ9BZA7 1347 aa8.26□□□□□ -1.09
ATXN3-223ENST00000553686 PCDH11YQ9BZA8 1340 aa8.26□□□□□ -1.09
ATXN3-223ENST00000553686 LEFTY1O75610 366 aa8.25□□□□□ -1.09
ATXN3-223ENST00000553686 TFE3P19532 575 aaPredicted RBP8.25□□□□□ -1.09
ATXN3-223ENST00000553686 AMPHP49418 695 aa8.25□□□□□ -1.09
ATXN3-223ENST00000553686 NME9Q86XW9 330 aa8.25□□□□□ -1.09
ATXN3-223ENST00000553686 TTLL6Q8N841 843 aa8.25□□□□□ -1.09
ATXN3-223ENST00000553686 GPR101Q96P66 508 aaPredicted RBP8.25□□□□□ -1.09
ATXN3-223ENST00000553686 DUSP23Q9BVJ7 150 aa8.25□□□□□ -1.09
ATXN3-223ENST00000553686 MIR1-1HGQ9H1L0 117 aa8.25□□□□□ -1.09
ATXN3-223ENST00000553686 KDM6AO15550 1401 aaPredicted RBP8.25□□□□□ -1.09
ATXN3-223ENST00000553686 NFAT5O94916 1531 aa8.24□□□□□ -1.09
ATXN3-223ENST00000553686 PDE4DIPQ5VU43 2346 aa8.24□□□□□ -1.09
ATXN3-223ENST00000553686 PRAMEF27A3QJZ7 478 aa8.24□□□□□ -1.09
ATXN3-223ENST00000553686 ADAMTS4O75173 837 aa8.24□□□□□ -1.09
ATXN3-223ENST00000553686 RPS6KA4O75676 772 aa8.24□□□□□ -1.09
ATXN3-223ENST00000553686 MAP2K2P36507 400 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms