RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.77■□□□□ 0.6
ACTN1-209ENST00000553659 KBTBD3Q8NAB2 608 aa18.77■□□□□ 0.6
ACTN1-209ENST00000553659 PRPF38AQ8NAV1 312 aaKnown RBP18.77■□□□□ 0.6
ACTN1-209ENST00000553659 TSEN34Q9BSV6 310 aaKnown RBP18.77■□□□□ 0.6
ACTN1-209ENST00000553659 TM6SF1Q9BZW5 370 aa18.77■□□□□ 0.6
ACTN1-209ENST00000553659 SEMA6BQ9H3T3 888 aa18.77■□□□□ 0.6
ACTN1-209ENST00000553659 A0A1W2PQ45 241 aaPredicted RBP18.76■□□□□ 0.59
ACTN1-209ENST00000553659 A0A1W2PQY0 241 aa18.76■□□□□ 0.59
ACTN1-209ENST00000553659 ATP2A1O14983 1001 aa18.76■□□□□ 0.59
ACTN1-209ENST00000553659 ADAMTS4O75173 837 aa18.76■□□□□ 0.59
ACTN1-209ENST00000553659 CD2BP2O95400 341 aaKnown RBP18.76■□□□□ 0.59
ACTN1-209ENST00000553659 NDUFB10O96000 172 aa18.76■□□□□ 0.59
ACTN1-209ENST00000553659 ITGB8P26012 769 aa18.76■□□□□ 0.59
ACTN1-209ENST00000553659 NMIQ13287 307 aaPredicted RBP18.76■□□□□ 0.59
ACTN1-209ENST00000553659 SNRNP48Q6IEG0 339 aaKnown RBP18.76■□□□□ 0.59
ACTN1-209ENST00000553659 MAMDC4Q6UXC1 1216 aa18.76■□□□□ 0.59
ACTN1-209ENST00000553659 STK11IPQ8N1F8 1099 aa18.76■□□□□ 0.59
ACTN1-209ENST00000553659 APPBP2Q92624 585 aa18.76■□□□□ 0.59
ACTN1-209ENST00000553659 OSBP2Q969R2 916 aa18.76■□□□□ 0.59
ACTN1-209ENST00000553659 DDX11Q96FC9 970 aa18.76■□□□□ 0.59
ACTN1-209ENST00000553659 CDX2Q99626 313 aaPredicted RBP18.76■□□□□ 0.59
ACTN1-209ENST00000553659 RIPK3Q9Y572 518 aa18.76■□□□□ 0.59
ACTN1-209ENST00000553659 SYNGAP1Q96PV0 1343 aa18.75■□□□□ 0.59
ACTN1-209ENST00000553659 DNAJC25-GNG10A0A024R161 153 aa18.75■□□□□ 0.59
ACTN1-209ENST00000553659 KIAA0355O15063 1070 aa18.75■□□□□ 0.59
ACTN1-209ENST00000553659 SNAI1O95863 264 aaPredicted RBP18.75■□□□□ 0.59
ACTN1-209ENST00000553659 NUCB2P80303 420 aa18.75■□□□□ 0.59
ACTN1-209ENST00000553659 CLIP2Q9UDT6 1046 aa18.75■□□□□ 0.59
ACTN1-209ENST00000553659 FAM184BQ9ULE4 1060 aa18.75■□□□□ 0.59
ACTN1-209ENST00000553659 A0A0C4DFX4 3053 aa18.74■□□□□ 0.59
ACTN1-209ENST00000553659 IGKV6D-41A0A0C4DH26 115 aa18.74■□□□□ 0.59
ACTN1-209ENST00000553659 RNF113AO15541 343 aaKnown RBP18.74■□□□□ 0.59
ACTN1-209ENST00000553659 PQBP1O60828 265 aaKnown RBP18.74■□□□□ 0.59
ACTN1-209ENST00000553659 ZBED4O75132 1171 aa18.74■□□□□ 0.59
ACTN1-209ENST00000553659 RAG1P15918 1043 aa18.74■□□□□ 0.59
ACTN1-209ENST00000553659 PSMA5P28066 241 aa18.74■□□□□ 0.59
ACTN1-209ENST00000553659 ACLYP53396 1101 aa18.74■□□□□ 0.59
ACTN1-209ENST00000553659 ZNF467Q7Z7K2 595 aaPredicted RBP18.74■□□□□ 0.59
ACTN1-209ENST00000553659 ZNF444Q8N0Y2 327 aaPredicted RBP18.74■□□□□ 0.59
ACTN1-209ENST00000553659 CPXCR1Q8N123 301 aa18.74■□□□□ 0.59
ACTN1-209ENST00000553659 SPRYD3Q8NCJ5 442 aa18.74■□□□□ 0.59
ACTN1-209ENST00000553659 KLHDC9Q8NEP7 349 aa18.74■□□□□ 0.59
ACTN1-209ENST00000553659 NUP133Q8WUM0 1156 aa18.74■□□□□ 0.59
ACTN1-209ENST00000553659 MAP4K1Q92918 833 aa18.74■□□□□ 0.59
ACTN1-209ENST00000553659 MKL1Q969V6 931 aa18.74■□□□□ 0.59
ACTN1-209ENST00000553659 LENG1Q96BZ8 264 aaPredicted RBP18.74■□□□□ 0.59
ACTN1-209ENST00000553659 INTS4Q96HW7 963 aaKnown RBP18.74■□□□□ 0.59
ACTN1-209ENST00000553659 TOX2Q96NM4 488 aa18.74■□□□□ 0.59
ACTN1-209ENST00000553659 COL25A1Q9BXS0 654 aaPredicted RBP18.74■□□□□ 0.59
ACTN1-209ENST00000553659 IL25Q9H293 177 aa18.74■□□□□ 0.59
ACTN1-209ENST00000553659 ZNF287Q9HBT7 754 aa18.74■□□□□ 0.59
ACTN1-209ENST00000553659 HELLSQ9NRZ9 838 aa18.74■□□□□ 0.59
ACTN1-209ENST00000553659 SNX14Q9Y5W7 946 aa18.74■□□□□ 0.59
ACTN1-209ENST00000553659 MOXD2PA6NHM9 499 aa18.73■□□□□ 0.59
ACTN1-209ENST00000553659 ZFYP08048 801 aaPredicted RBP18.73■□□□□ 0.59
ACTN1-209ENST00000553659 GNAT2P19087 354 aa18.73■□□□□ 0.59
ACTN1-209ENST00000553659 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.73■□□□□ 0.59
ACTN1-209ENST00000553659 ANKRD33Q7Z3H0 272 aa18.73■□□□□ 0.59
ACTN1-209ENST00000553659 GBP4Q96PP9 640 aa18.73■□□□□ 0.59
ACTN1-209ENST00000553659 STARD7Q9NQZ5 370 aa18.73■□□□□ 0.59
ACTN1-209ENST00000553659 TMEM39AQ9NV64 488 aa18.73■□□□□ 0.59
ACTN1-209ENST00000553659 SYNPO2Q9UMS6 1093 aa18.73■□□□□ 0.59
ACTN1-209ENST00000553659 CTDP1Q9Y5B0 961 aaPredicted RBP18.73■□□□□ 0.59
ACTN1-209ENST00000553659 LAMA2P24043 3122 aaKnown RBP18.73■□□□□ 0.59
ACTN1-209ENST00000553659 SYNRGQ9UMZ2 1314 aa18.73■□□□□ 0.59
ACTN1-209ENST00000553659 DDX11L8A8MPP1 907 aa18.72■□□□□ 0.59
ACTN1-209ENST00000553659 DCDC2CA8MYV0 355 aa18.72■□□□□ 0.59
ACTN1-209ENST00000553659 GPAA1O43292 621 aa18.72■□□□□ 0.59
ACTN1-209ENST00000553659 DUSP11O75319 330 aaKnown RBP18.72■□□□□ 0.59
ACTN1-209ENST00000553659 EPHB4P54760 987 aa18.72■□□□□ 0.59
ACTN1-209ENST00000553659 FAAP100Q0VG06 881 aa18.72■□□□□ 0.59
ACTN1-209ENST00000553659 KRT32Q14532 448 aa18.72■□□□□ 0.59
ACTN1-209ENST00000553659 KCNA10Q16322 511 aa18.72■□□□□ 0.59
ACTN1-209ENST00000553659 MCMDC2Q4G0Z9 681 aa18.72■□□□□ 0.59
ACTN1-209ENST00000553659 CCSAPQ6IQ19 270 aaPredicted RBP18.72■□□□□ 0.59
ACTN1-209ENST00000553659 KIFC2Q96AC6 838 aa18.72■□□□□ 0.59
ACTN1-209ENST00000553659 RNPC3Q96LT9 517 aaKnown RBP18.72■□□□□ 0.59
ACTN1-209ENST00000553659 TTYH1Q9H313 450 aaPredicted RBP18.72■□□□□ 0.59
ACTN1-209ENST00000553659 SLC38A10Q9HBR0 1119 aa18.72■□□□□ 0.59
ACTN1-209ENST00000553659 EPB41L4AQ9HCS5 686 aaPredicted RBP18.72■□□□□ 0.59
ACTN1-209ENST00000553659 MTMR4Q9NYA4 1195 aa18.72■□□□□ 0.59
ACTN1-209ENST00000553659 FEM1BQ9UK73 627 aa18.72■□□□□ 0.59
ACTN1-209ENST00000553659 A0A0D9SFI3 127 aa18.71■□□□□ 0.59
ACTN1-209ENST00000553659 PATL2C9JE40 543 aaKnown RBP18.71■□□□□ 0.59
ACTN1-209ENST00000553659 APPP05067 770 aa18.71■□□□□ 0.59
ACTN1-209ENST00000553659 TDO2P48775 406 aa18.71■□□□□ 0.59
ACTN1-209ENST00000553659 FPGSQ05932 587 aa18.71■□□□□ 0.59
ACTN1-209ENST00000553659 CUL4AQ13619 759 aa18.71■□□□□ 0.59
ACTN1-209ENST00000553659 ACVR2BQ13705 512 aa18.71■□□□□ 0.59
ACTN1-209ENST00000553659 NECTIN1Q15223 517 aa18.71■□□□□ 0.59
ACTN1-209ENST00000553659 CHST13Q8NET6 341 aa18.71■□□□□ 0.59
ACTN1-209ENST00000553659 CEP95Q96GE4 821 aa18.71■□□□□ 0.59
ACTN1-209ENST00000553659 FAM227BQ96M60 508 aa18.71■□□□□ 0.59
ACTN1-209ENST00000553659 RAVER2Q9HCJ3 691 aaKnown RBP18.71■□□□□ 0.59
ACTN1-209ENST00000553659 FBXO40Q9UH90 709 aa18.71■□□□□ 0.59
ACTN1-209ENST00000553659 ZHX1Q9UKY1 873 aaPredicted RBP18.71■□□□□ 0.59
ACTN1-209ENST00000553659 U3KPZ7 1027 aaPredicted RBP18.71■□□□□ 0.59
ACTN1-209ENST00000553659 M0R2C6 588 aa18.7■□□□□ 0.58
ACTN1-209ENST00000553659 PRDM1O75626 825 aa18.7■□□□□ 0.58
ACTN1-209ENST00000553659 TTLL1O95922 423 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms