RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 PPP1R18Q6NYC8 613 aa15.79■□□□□ 0.12
APEX1-205ENST00000553555 ERO1BQ86YB8 467 aa15.79■□□□□ 0.12
APEX1-205ENST00000553555 CNKSR2Q8WXI2 1034 aa15.79■□□□□ 0.12
APEX1-205ENST00000553555 KIFC2Q96AC6 838 aa15.79■□□□□ 0.12
APEX1-205ENST00000553555 USP28Q96RU2 1077 aa15.79■□□□□ 0.12
APEX1-205ENST00000553555 SCAND2PQ9GZW5 306 aaPredicted RBP15.79■□□□□ 0.12
APEX1-205ENST00000553555 C6orf50Q9HD87 102 aa15.79■□□□□ 0.12
APEX1-205ENST00000553555 FBXO28Q9NVF7 368 aa15.79■□□□□ 0.12
APEX1-205ENST00000553555 SPDYE5A6NIY4 337 aa15.78■□□□□ 0.12
APEX1-205ENST00000553555 M0R2N6 131 aa15.78■□□□□ 0.12
APEX1-205ENST00000553555 GNA11P29992 359 aa15.78■□□□□ 0.12
APEX1-205ENST00000553555 CSPP1Q1MSJ5 1256 aa15.78■□□□□ 0.12
APEX1-205ENST00000553555 FBXO11Q86XK2 927 aa15.78■□□□□ 0.12
APEX1-205ENST00000553555 PRPF38AQ8NAV1 312 aaKnown RBP15.78■□□□□ 0.12
APEX1-205ENST00000553555 SLF1Q9BQI6 1058 aa15.78■□□□□ 0.12
APEX1-205ENST00000553555 AMNQ9BXJ7 453 aa15.78■□□□□ 0.12
APEX1-205ENST00000553555 RANBP17Q9H2T7 1088 aaKnown RBP15.78■□□□□ 0.12
APEX1-205ENST00000553555 RPAP3Q9H6T3 665 aaPredicted RBP15.78■□□□□ 0.12
APEX1-205ENST00000553555 ZNF408Q9H9D4 720 aa15.78■□□□□ 0.12
APEX1-205ENST00000553555 TMOD4Q9NZQ9 345 aa15.78■□□□□ 0.12
APEX1-205ENST00000553555 FKBP1BP68106 108 aa15.77■□□□□ 0.12
APEX1-205ENST00000553555 EARS2Q5JPH6 523 aaKnown RBP15.77■□□□□ 0.12
APEX1-205ENST00000553555 CHADLQ6NUI6 762 aa15.77■□□□□ 0.12
APEX1-205ENST00000553555 LEO1Q8WVC0 666 aaPredicted RBP15.77■□□□□ 0.12
APEX1-205ENST00000553555 SPATA32Q96LK8 384 aa15.77■□□□□ 0.12
APEX1-205ENST00000553555 TANGO6Q9C0B7 1094 aa15.77■□□□□ 0.12
APEX1-205ENST00000553555 RTEL1Q9NZ71 1219 aa15.77■□□□□ 0.12
APEX1-205ENST00000553555 RCOR1Q9UKL0 485 aa15.77■□□□□ 0.12
APEX1-205ENST00000553555 PCDHA6Q9UN73 950 aa15.77■□□□□ 0.12
APEX1-205ENST00000553555 PCDHA8Q9Y5H6 950 aa15.77■□□□□ 0.12
APEX1-205ENST00000553555 PCDHA1Q9Y5I3 950 aa15.77■□□□□ 0.12
APEX1-205ENST00000553555 COL11A1P12107 1806 aaPredicted RBP15.77■□□□□ 0.12
APEX1-205ENST00000553555 LOC285556D6RIA3 1793 aa15.77■□□□□ 0.11
APEX1-205ENST00000553555 CXCL11O14625 94 aa15.76■□□□□ 0.11
APEX1-205ENST00000553555 ITGBL1O95965 494 aaPredicted RBP15.76■□□□□ 0.11
APEX1-205ENST00000553555 TOB1P50616 345 aaPredicted RBP15.76■□□□□ 0.11
APEX1-205ENST00000553555 CEBPZQ03701 1054 aaKnown RBP15.76■□□□□ 0.11
APEX1-205ENST00000553555 PPIL2Q13356 520 aa15.76■□□□□ 0.11
APEX1-205ENST00000553555 NOM1Q5C9Z4 860 aaKnown RBP15.76■□□□□ 0.11
APEX1-205ENST00000553555 RILPL1Q5EBL4 403 aa15.76■□□□□ 0.11
APEX1-205ENST00000553555 OTUD5Q96G74 571 aa15.76■□□□□ 0.11
APEX1-205ENST00000553555 FTOQ9C0B1 505 aaKnown RBP eCLIP15.76■□□□□ 0.11
APEX1-205ENST00000553555 RIC8AQ9NPQ8 531 aa15.76■□□□□ 0.11
APEX1-205ENST00000553555 POLR3EQ9NVU0 708 aa15.76■□□□□ 0.11
APEX1-205ENST00000553555 ELP1O95163 1332 aa15.76■□□□□ 0.11
APEX1-205ENST00000553555 FAM205CA6NFA0 338 aa15.76■□□□□ 0.11
APEX1-205ENST00000553555 IRF6O14896 467 aa15.76■□□□□ 0.11
APEX1-205ENST00000553555 FLOT1O75955 427 aa15.76■□□□□ 0.11
APEX1-205ENST00000553555 NASPP49321 788 aaPredicted RBP15.76■□□□□ 0.11
APEX1-205ENST00000553555 ADCY7P51828 1080 aa15.76■□□□□ 0.11
APEX1-205ENST00000553555 TRAF1Q13077 416 aa15.76■□□□□ 0.11
APEX1-205ENST00000553555 ANO1Q5XXA6 986 aa15.76■□□□□ 0.11
APEX1-205ENST00000553555 BICD2Q8TD16 824 aa15.76■□□□□ 0.11
APEX1-205ENST00000553555 GBA2Q9HCG7 927 aaPredicted RBP15.76■□□□□ 0.11
APEX1-205ENST00000553555 PPP1R9AQ9ULJ8 1098 aa15.76■□□□□ 0.11
APEX1-205ENST00000553555 KCNH4Q9UQ05 1017 aa15.76■□□□□ 0.11
APEX1-205ENST00000553555 CLIC4Q9Y696 253 aa15.76■□□□□ 0.11
APEX1-205ENST00000553555 GADD45BO75293 160 aaPredicted RBP15.75■□□□□ 0.11
APEX1-205ENST00000553555 CELF2O95319 508 aaKnown RBP15.75■□□□□ 0.11
APEX1-205ENST00000553555 CCDC174Q6PII3 467 aa15.75■□□□□ 0.11
APEX1-205ENST00000553555 SAMD1Q6SPF0 538 aaPredicted RBP15.75■□□□□ 0.11
APEX1-205ENST00000553555 CATSPERGQ6ZRH7 1159 aa15.75■□□□□ 0.11
APEX1-205ENST00000553555 C2orf69Q8N8R5 385 aa15.75■□□□□ 0.11
APEX1-205ENST00000553555 RASGRP4Q8TDF6 673 aa15.75■□□□□ 0.11
APEX1-205ENST00000553555 OPTNQ96CV9 577 aa15.75■□□□□ 0.11
APEX1-205ENST00000553555 SLC10A4Q96EP9 437 aa15.75■□□□□ 0.11
APEX1-205ENST00000553555 MYH7BA7E2Y1 1941 aa15.74■□□□□ 0.11
APEX1-205ENST00000553555 A0A0G2JLL6 359 aaPredicted RBP15.74■□□□□ 0.11
APEX1-205ENST00000553555 USP17L15C9J2P7 530 aa15.74■□□□□ 0.11
APEX1-205ENST00000553555 USP17L13C9JLJ4 530 aa15.74■□□□□ 0.11
APEX1-205ENST00000553555 USP17L11C9JVI0 530 aa15.74■□□□□ 0.11
APEX1-205ENST00000553555 USP17L18D6R9N7 530 aa15.74■□□□□ 0.11
APEX1-205ENST00000553555 USP17L22D6RA61 530 aa15.74■□□□□ 0.11
APEX1-205ENST00000553555 USP17L17D6RBQ6 530 aa15.74■□□□□ 0.11
APEX1-205ENST00000553555 USP17L19D6RCP7 530 aa15.74■□□□□ 0.11
APEX1-205ENST00000553555 USP17L20D6RJB6 530 aa15.74■□□□□ 0.11
APEX1-205ENST00000553555 YEATS4O95619 227 aa15.74■□□□□ 0.11
APEX1-205ENST00000553555 FDX1P10109 184 aa15.74■□□□□ 0.11
APEX1-205ENST00000553555 MRPL12P52815 198 aaKnown RBP15.74■□□□□ 0.11
APEX1-205ENST00000553555 USP17L24Q0WX57 530 aa15.74■□□□□ 0.11
APEX1-205ENST00000553555 SF3A1Q15459 793 aaKnown RBP15.74■□□□□ 0.11
APEX1-205ENST00000553555 USH1GQ495M9 461 aa15.74■□□□□ 0.11
APEX1-205ENST00000553555 PIK3AP1Q6ZUJ8 805 aa15.74■□□□□ 0.11
APEX1-205ENST00000553555 PRRT2Q7Z6L0 340 aaPredicted RBP15.74■□□□□ 0.11
APEX1-205ENST00000553555 LINC00301Q8NCQ3 95 aa15.74■□□□□ 0.11
APEX1-205ENST00000553555 CUL5Q93034 780 aa15.74■□□□□ 0.11
APEX1-205ENST00000553555 GLT8D2Q9H1C3 349 aa15.74■□□□□ 0.11
APEX1-205ENST00000553555 PSTPIP2Q9H939 334 aa15.74■□□□□ 0.11
APEX1-205ENST00000553555 SLC38A10Q9HBR0 1119 aa15.74■□□□□ 0.11
APEX1-205ENST00000553555 NOL7Q9UMY1 257 aaKnown RBP15.74■□□□□ 0.11
APEX1-205ENST00000553555 CCDC194A0A1B0GVG4 234 aa15.73■□□□□ 0.11
APEX1-205ENST00000553555 TRAK2O60296 914 aa15.73■□□□□ 0.11
APEX1-205ENST00000553555 DSG3P32926 999 aa15.73■□□□□ 0.11
APEX1-205ENST00000553555 COG2Q14746 738 aa15.73■□□□□ 0.11
APEX1-205ENST00000553555 STK38Q15208 465 aa15.73■□□□□ 0.11
APEX1-205ENST00000553555 SKOR2Q2VWA4 1001 aaPredicted RBP15.73■□□□□ 0.11
APEX1-205ENST00000553555 KRT25Q7Z3Z0 450 aa15.73■□□□□ 0.11
APEX1-205ENST00000553555 REXO1Q8N1G1 1221 aaKnown RBP15.73■□□□□ 0.11
APEX1-205ENST00000553555 PROCA1Q8NCQ7 364 aaPredicted RBP15.73■□□□□ 0.11
APEX1-205ENST00000553555 BIN2Q9UBW5 565 aaPredicted RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms