RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 RIPK3Q9Y572 518 aa17.27■□□□□ 0.36
MTHFD1-204ENST00000553405 GNAQP50148 359 aa17.26■□□□□ 0.35
MTHFD1-204ENST00000553405 RIOX2Q8IUF8 465 aa17.26■□□□□ 0.35
MTHFD1-204ENST00000553405 ZNF296Q8WUU4 475 aaPredicted RBP17.26■□□□□ 0.35
MTHFD1-204ENST00000553405 GTF3C6Q969F1 213 aa17.26■□□□□ 0.35
MTHFD1-204ENST00000553405 PAGR1Q9BTK6 254 aa17.26■□□□□ 0.35
MTHFD1-204ENST00000553405 ISY1Q9ULR0 285 aaKnown RBP17.26■□□□□ 0.35
MTHFD1-204ENST00000553405 LIMCH1Q9UPQ0 1083 aa17.26■□□□□ 0.35
MTHFD1-204ENST00000553405 MGAMO43451 1857 aa17.26■□□□□ 0.35
MTHFD1-204ENST00000553405 CTDNEP1O95476 244 aa17.25■□□□□ 0.35
MTHFD1-204ENST00000553405 ICAM1P05362 532 aa17.25■□□□□ 0.35
MTHFD1-204ENST00000553405 CCT2P78371 535 aaKnown RBP17.25■□□□□ 0.35
MTHFD1-204ENST00000553405 LACTBP83111 547 aaPredicted RBP17.25■□□□□ 0.35
MTHFD1-204ENST00000553405 IKQ13123 557 aaPredicted RBP17.25■□□□□ 0.35
MTHFD1-204ENST00000553405 CDC37Q16543 378 aaPredicted RBP17.25■□□□□ 0.35
MTHFD1-204ENST00000553405 QRICH1Q2TAL8 776 aa17.25■□□□□ 0.35
MTHFD1-204ENST00000553405 SAMD1Q6SPF0 538 aaPredicted RBP17.25■□□□□ 0.35
MTHFD1-204ENST00000553405 NOL8Q76FK4 1167 aaKnown RBP17.25■□□□□ 0.35
MTHFD1-204ENST00000553405 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.25■□□□□ 0.35
MTHFD1-204ENST00000553405 SHCBP1Q8NEM2 672 aa17.25■□□□□ 0.35
MTHFD1-204ENST00000553405 AGBL1Q96MI9 1066 aa17.25■□□□□ 0.35
MTHFD1-204ENST00000553405 PIGSQ96S52 555 aa17.25■□□□□ 0.35
MTHFD1-204ENST00000553405 BEGAINQ9BUH8 593 aa17.25■□□□□ 0.35
MTHFD1-204ENST00000553405 TEX13BQ9BXU2 312 aa17.25■□□□□ 0.35
MTHFD1-204ENST00000553405 ARHGAP39Q9C0H5 1083 aa17.25■□□□□ 0.35
MTHFD1-204ENST00000553405 RAVER2Q9HCJ3 691 aaKnown RBP17.25■□□□□ 0.35
MTHFD1-204ENST00000553405 PLXNB2O15031 1838 aa17.25■□□□□ 0.35
MTHFD1-204ENST00000553405 ZBED4O75132 1171 aa17.24■□□□□ 0.35
MTHFD1-204ENST00000553405 IFNAR1P17181 557 aa17.24■□□□□ 0.35
MTHFD1-204ENST00000553405 STAT3P40763 770 aa17.24■□□□□ 0.35
MTHFD1-204ENST00000553405 SP3Q02447 781 aa17.24■□□□□ 0.35
MTHFD1-204ENST00000553405 NECAB1Q8N987 351 aa17.24■□□□□ 0.35
MTHFD1-204ENST00000553405 DOCK3Q8IZD9 2030 aa17.24■□□□□ 0.35
MTHFD1-204ENST00000553405 ZBTB5O15062 677 aa17.23■□□□□ 0.35
MTHFD1-204ENST00000553405 STK3Q13188 491 aa17.23■□□□□ 0.35
MTHFD1-204ENST00000553405 SNRNP48Q6IEG0 339 aaKnown RBP17.23■□□□□ 0.35
MTHFD1-204ENST00000553405 CCDC174Q6PII3 467 aa17.23■□□□□ 0.35
MTHFD1-204ENST00000553405 TRIM47Q96LD4 638 aa17.23■□□□□ 0.35
MTHFD1-204ENST00000553405 EFCC1Q9HA90 598 aa17.23■□□□□ 0.35
MTHFD1-204ENST00000553405 VAT1LQ9HCJ6 419 aa17.23■□□□□ 0.35
MTHFD1-204ENST00000553405 NAP1L2Q9ULW6 460 aaPredicted RBP17.23■□□□□ 0.35
MTHFD1-204ENST00000553405 ZNF236Q9UL36 1845 aa17.23■□□□□ 0.35
MTHFD1-204ENST00000553405 MYH6P13533 1939 aa17.23■□□□□ 0.35
MTHFD1-204ENST00000553405 PNMA6FA0A0J9YX94 578 aa17.22■□□□□ 0.35
MTHFD1-204ENST00000553405 CCDC196A0A1B0GTZ2 297 aa17.22■□□□□ 0.35
MTHFD1-204ENST00000553405 OPLAHO14841 1288 aa17.22■□□□□ 0.35
MTHFD1-204ENST00000553405 ST18O60284 1047 aa17.22■□□□□ 0.35
MTHFD1-204ENST00000553405 FKTNO75072 461 aa17.22■□□□□ 0.35
MTHFD1-204ENST00000553405 ERCC3P19447 782 aa17.22■□□□□ 0.35
MTHFD1-204ENST00000553405 PKN1Q16512 942 aa17.22■□□□□ 0.35
MTHFD1-204ENST00000553405 CPXCR1Q8N123 301 aa17.22■□□□□ 0.35
MTHFD1-204ENST00000553405 CCDC82Q8N4S0 544 aa17.22■□□□□ 0.35
MTHFD1-204ENST00000553405 CLEC4DQ8WXI8 215 aa17.22■□□□□ 0.35
MTHFD1-204ENST00000553405 SHISA4Q96DD7 197 aa17.22■□□□□ 0.35
MTHFD1-204ENST00000553405 SLKQ9H2G2 1235 aaPredicted RBP17.22■□□□□ 0.35
MTHFD1-204ENST00000553405 CASP8AP2Q9UKL3 1982 aa17.22■□□□□ 0.35
MTHFD1-204ENST00000553405 hCG_1642624A0A1W2PR95 340 aa17.21■□□□□ 0.35
MTHFD1-204ENST00000553405 CTCFP49711 727 aaPredicted RBP17.21■□□□□ 0.35
MTHFD1-204ENST00000553405 CD99L2Q8TCZ2 262 aa17.21■□□□□ 0.35
MTHFD1-204ENST00000553405 USP6NLQ92738 828 aa17.21■□□□□ 0.35
MTHFD1-204ENST00000553405 PHKBQ93100 1093 aa17.21■□□□□ 0.35
MTHFD1-204ENST00000553405 SNX21Q969T3 373 aa17.21■□□□□ 0.35
MTHFD1-204ENST00000553405 TMX3Q96JJ7 454 aa17.21■□□□□ 0.35
MTHFD1-204ENST00000553405 ZSCAN31Q96LW9 406 aaPredicted RBP17.21■□□□□ 0.35
MTHFD1-204ENST00000553405 GJD2Q9UKL4 321 aa17.21■□□□□ 0.35
MTHFD1-204ENST00000553405 LCTP09848 1927 aa17.21■□□□□ 0.35
MTHFD1-204ENST00000553405 PRPF3O43395 683 aaKnown RBP17.2■□□□□ 0.34
MTHFD1-204ENST00000553405 DTNBO60941 627 aa17.2■□□□□ 0.34
MTHFD1-204ENST00000553405 SLC25A27O95847 323 aa17.2■□□□□ 0.34
MTHFD1-204ENST00000553405 FDPSP14324 419 aaKnown RBP17.2■□□□□ 0.34
MTHFD1-204ENST00000553405 MAPK4P31152 587 aa17.2■□□□□ 0.34
MTHFD1-204ENST00000553405 LBX1P52954 281 aa17.2■□□□□ 0.34
MTHFD1-204ENST00000553405 CCNA1P78396 465 aa17.2■□□□□ 0.34
MTHFD1-204ENST00000553405 PLS1Q14651 629 aa17.2■□□□□ 0.34
MTHFD1-204ENST00000553405 TKFCQ3LXA3 575 aa17.2■□□□□ 0.34
MTHFD1-204ENST00000553405 MUM1L1Q5H9M0 696 aa17.2■□□□□ 0.34
MTHFD1-204ENST00000553405 TYW1BQ6NUM6 668 aa17.2■□□□□ 0.34
MTHFD1-204ENST00000553405 HOMER1Q86YM7 354 aa17.2■□□□□ 0.34
MTHFD1-204ENST00000553405 NSUN7Q8NE18 718 aaKnown RBP17.2■□□□□ 0.34
MTHFD1-204ENST00000553405 RNF26Q9BY78 433 aaPredicted RBP17.2■□□□□ 0.34
MTHFD1-204ENST00000553405 MROH8Q9H579 483 aa17.2■□□□□ 0.34
MTHFD1-204ENST00000553405 SH2B1Q9NRF2 756 aaPredicted RBP17.2■□□□□ 0.34
MTHFD1-204ENST00000553405 CCPG1Q9ULG6 757 aa17.2■□□□□ 0.34
MTHFD1-204ENST00000553405 V9GY48 417 aaPredicted RBP17.2■□□□□ 0.34
MTHFD1-204ENST00000553405 DHX16O60231 1041 aaKnown RBP17.19■□□□□ 0.34
MTHFD1-204ENST00000553405 PPFIA3O75145 1194 aa17.19■□□□□ 0.34
MTHFD1-204ENST00000553405 FMNL1O95466 1100 aaPredicted RBP17.19■□□□□ 0.34
MTHFD1-204ENST00000553405 PSMC4P43686 418 aa17.19■□□□□ 0.34
MTHFD1-204ENST00000553405 MCM2P49736 904 aa17.19■□□□□ 0.34
MTHFD1-204ENST00000553405 GHRHRQ02643 423 aa17.19■□□□□ 0.34
MTHFD1-204ENST00000553405 GRB14Q14449 540 aa17.19■□□□□ 0.34
MTHFD1-204ENST00000553405 MORN1Q5T089 497 aa17.19■□□□□ 0.34
MTHFD1-204ENST00000553405 GPR142Q7Z601 462 aa17.19■□□□□ 0.34
MTHFD1-204ENST00000553405 FBXO11Q86XK2 927 aa17.19■□□□□ 0.34
MTHFD1-204ENST00000553405 SMARCC2Q8TAQ2 1214 aa17.19■□□□□ 0.34
MTHFD1-204ENST00000553405 PIBF1Q8WXW3 757 aa17.19■□□□□ 0.34
MTHFD1-204ENST00000553405 RRP36Q96EU6 259 aaKnown RBP17.19■□□□□ 0.34
MTHFD1-204ENST00000553405 AMNQ9BXJ7 453 aa17.19■□□□□ 0.34
MTHFD1-204ENST00000553405 RNF146Q9NTX7 359 aa17.19■□□□□ 0.34
MTHFD1-204ENST00000553405 CENPFP49454 3210 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms