RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 VRTNQ9H8Y1 702 aa6.37□□□□□ -1.39
CKAP4-203ENST00000553039 BTBD7Q9P203 1132 aa6.37□□□□□ -1.39
CKAP4-203ENST00000553039 CEP126Q9P2H0 1117 aa6.37□□□□□ -1.39
CKAP4-203ENST00000553039 PCDHB15Q9Y5E8 787 aa6.37□□□□□ -1.39
CKAP4-203ENST00000553039 PCDHGA4Q9Y5G9 962 aa6.37□□□□□ -1.39
CKAP4-203ENST00000553039 RIF1Q5UIP0 2472 aaKnown RBP6.36□□□□□ -1.39
CKAP4-203ENST00000553039 CDH23Q9H251 3354 aa6.36□□□□□ -1.39
CKAP4-203ENST00000553039 ZEB2O60315 1214 aa6.36□□□□□ -1.39
CKAP4-203ENST00000553039 ADAMTS4O75173 837 aa6.36□□□□□ -1.39
CKAP4-203ENST00000553039 KRT37O76014 449 aa6.36□□□□□ -1.39
CKAP4-203ENST00000553039 CD4P01730 458 aa6.36□□□□□ -1.39
CKAP4-203ENST00000553039 ASGR1P07306 291 aa6.36□□□□□ -1.39
CKAP4-203ENST00000553039 SUPT20HL2P0C7V6 817 aa6.36□□□□□ -1.39
CKAP4-203ENST00000553039 IL9P15248 144 aa6.36□□□□□ -1.39
CKAP4-203ENST00000553039 RFX1P22670 979 aa6.36□□□□□ -1.39
CKAP4-203ENST00000553039 CCL23P55773 120 aa6.36□□□□□ -1.39
CKAP4-203ENST00000553039 RHBDL3P58872 404 aa6.36□□□□□ -1.39
CKAP4-203ENST00000553039 TCF15Q12870 199 aa6.36□□□□□ -1.39
CKAP4-203ENST00000553039 PLS1Q14651 629 aa6.36□□□□□ -1.39
CKAP4-203ENST00000553039 KCTD2Q14681 263 aa6.36□□□□□ -1.39
CKAP4-203ENST00000553039 RRP1BQ14684 758 aaKnown RBP6.36□□□□□ -1.39
CKAP4-203ENST00000553039 TWISTNBQ3B726 338 aaPredicted RBP6.36□□□□□ -1.39
CKAP4-203ENST00000553039 HERC4Q5GLZ8 1057 aaPredicted RBP6.36□□□□□ -1.39
CKAP4-203ENST00000553039 CCSAPQ6IQ19 270 aaPredicted RBP6.36□□□□□ -1.39
CKAP4-203ENST00000553039 ADHFE1Q8IWW8 467 aa6.36□□□□□ -1.39
CKAP4-203ENST00000553039 FAM126BQ8IXS8 530 aa6.36□□□□□ -1.39
CKAP4-203ENST00000553039 ZBED2Q9BTP6 218 aa6.36□□□□□ -1.39
CKAP4-203ENST00000553039 KIAA1683Q9H0B3 1180 aa6.36□□□□□ -1.39
CKAP4-203ENST00000553039 CABP5Q9NP86 173 aa6.36□□□□□ -1.39
CKAP4-203ENST00000553039 DLG5Q8TDM6 1919 aa6.36□□□□□ -1.39
CKAP4-203ENST00000553039 SPTBN4Q9H254 2564 aa6.36□□□□□ -1.39
CKAP4-203ENST00000553039 MROH7-TTC4A0A0A0MT08 1334 aa6.35□□□□□ -1.39
CKAP4-203ENST00000553039 LTBP2Q14767 1821 aa6.35□□□□□ -1.39
CKAP4-203ENST00000553039 TMEM221A6NGB7 291 aa6.35□□□□□ -1.39
CKAP4-203ENST00000553039 M0R296 226 aa6.35□□□□□ -1.39
CKAP4-203ENST00000553039 EYA2O00167 538 aa6.35□□□□□ -1.39
CKAP4-203ENST00000553039 HLA-DOAP06340 250 aa6.35□□□□□ -1.39
CKAP4-203ENST00000553039 C6orf222P0C671 652 aaPredicted RBP6.35□□□□□ -1.39
CKAP4-203ENST00000553039 ZNF865P0CJ78 1059 aaPredicted RBP6.35□□□□□ -1.39
CKAP4-203ENST00000553039 NDUFV2P19404 249 aa6.35□□□□□ -1.39
CKAP4-203ENST00000553039 CST5P28325 142 aaPredicted RBP6.35□□□□□ -1.39
CKAP4-203ENST00000553039 RALBP1Q15311 655 aa6.35□□□□□ -1.39
CKAP4-203ENST00000553039 PTPROQ16827 1216 aa6.35□□□□□ -1.39
CKAP4-203ENST00000553039 TRIM67Q6ZTA4 783 aa6.35□□□□□ -1.39
CKAP4-203ENST00000553039 METTL16Q86W50 562 aaKnown RBP6.35□□□□□ -1.39
CKAP4-203ENST00000553039 TEX11Q8IYF3 940 aa6.35□□□□□ -1.39
CKAP4-203ENST00000553039 FBXL6Q8N531 539 aa6.35□□□□□ -1.39
CKAP4-203ENST00000553039 NEK9Q8TD19 979 aa6.35□□□□□ -1.39
CKAP4-203ENST00000553039 SRCIN1Q9C0H9 1055 aa6.35□□□□□ -1.39
CKAP4-203ENST00000553039 ZBTB21Q9ULJ3 1066 aa6.35□□□□□ -1.39
CKAP4-203ENST00000553039 RLFQ13129 1914 aa6.35□□□□□ -1.39
CKAP4-203ENST00000553039 EPOPA6NHQ4 379 aa6.34□□□□□ -1.39
CKAP4-203ENST00000553039 LPXNO60711 386 aa6.34□□□□□ -1.39
CKAP4-203ENST00000553039 VCAM1P19320 739 aa6.34□□□□□ -1.39
CKAP4-203ENST00000553039 RFC2P35250 354 aa6.34□□□□□ -1.39
CKAP4-203ENST00000553039 COPB2P35606 906 aa6.34□□□□□ -1.39
CKAP4-203ENST00000553039 USP46P62068 366 aa6.34□□□□□ -1.39
CKAP4-203ENST00000553039 MECOMQ03112 1051 aa6.34□□□□□ -1.39
CKAP4-203ENST00000553039 ZP2Q05996 745 aa6.34□□□□□ -1.39
CKAP4-203ENST00000553039 ITGA7Q13683 1181 aa6.34□□□□□ -1.39
CKAP4-203ENST00000553039 RAB3GAP1Q15042 981 aa6.34□□□□□ -1.39
CKAP4-203ENST00000553039 ZYXQ15942 572 aaKnown RBP6.34□□□□□ -1.39
CKAP4-203ENST00000553039 B4GALNT3Q6L9W6 998 aa6.34□□□□□ -1.39
CKAP4-203ENST00000553039 EP400NLQ6ZTU2 488 aa6.34□□□□□ -1.39
CKAP4-203ENST00000553039 DGLUCYQ7Z3D6 616 aa6.34□□□□□ -1.39
CKAP4-203ENST00000553039 HERC6Q8IVU3 1022 aa6.34□□□□□ -1.39
CKAP4-203ENST00000553039 UCN2Q96RP3 112 aa6.34□□□□□ -1.39
CKAP4-203ENST00000553039 TGS1Q96RS0 853 aaKnown RBP6.34□□□□□ -1.39
CKAP4-203ENST00000553039 CRBNQ96SW2 442 aa6.34□□□□□ -1.39
CKAP4-203ENST00000553039 MMP19Q99542 508 aa6.34□□□□□ -1.39
CKAP4-203ENST00000553039 NOC4LQ9BVI4 516 aaKnown RBP6.34□□□□□ -1.39
CKAP4-203ENST00000553039 FTOQ9C0B1 505 aaKnown RBP eCLIP6.34□□□□□ -1.396e-6■□□□□ 8.1
CKAP4-203ENST00000553039 RPAP3Q9H6T3 665 aaPredicted RBP6.34□□□□□ -1.39
CKAP4-203ENST00000553039 IGSF5Q9NSI5 407 aa6.34□□□□□ -1.39
CKAP4-203ENST00000553039 ADAMTS8Q9UP79 889 aa6.34□□□□□ -1.39
CKAP4-203ENST00000553039 PLXNA1Q9UIW2 1896 aa6.34□□□□□ -1.39
CKAP4-203ENST00000553039 MAST2Q6P0Q8 1798 aa6.34□□□□□ -1.4
CKAP4-203ENST00000553039 SYNRGQ9UMZ2 1314 aa6.33□□□□□ -1.4
CKAP4-203ENST00000553039 RBM47A0AV96 593 aaKnown RBP6.33□□□□□ -1.4
CKAP4-203ENST00000553039 F6X3S4 739 aa6.33□□□□□ -1.4
CKAP4-203ENST00000553039 GDF11O95390 407 aa6.33□□□□□ -1.4
CKAP4-203ENST00000553039 GH2P01242 217 aa6.33□□□□□ -1.4
CKAP4-203ENST00000553039 TAL1P17542 331 aaPredicted RBP6.33□□□□□ -1.4
CKAP4-203ENST00000553039 AVPR2P30518 371 aa6.33□□□□□ -1.4
CKAP4-203ENST00000553039 IRS1P35568 1242 aa6.33□□□□□ -1.4
CKAP4-203ENST00000553039 KCNJ6P48051 423 aa6.33□□□□□ -1.4
CKAP4-203ENST00000553039 GJA9P57773 515 aa6.33□□□□□ -1.4
CKAP4-203ENST00000553039 TTLL4Q14679 1199 aa6.33□□□□□ -1.4
CKAP4-203ENST00000553039 ATP2B3Q16720 1220 aa6.33□□□□□ -1.4
CKAP4-203ENST00000553039 ZNF792Q3KQV3 632 aa6.33□□□□□ -1.4
CKAP4-203ENST00000553039 RABL6Q3YEC7 729 aaPredicted RBP6.33□□□□□ -1.4
CKAP4-203ENST00000553039 SLC4A10Q6U841 1118 aa6.33□□□□□ -1.4
CKAP4-203ENST00000553039 DEFB128Q7Z7B8 93 aa6.33□□□□□ -1.4
CKAP4-203ENST00000553039 RNF135Q8IUD6 432 aa6.33□□□□□ -1.4
CKAP4-203ENST00000553039 SLC43A3Q8NBI5 491 aa6.33□□□□□ -1.4
CKAP4-203ENST00000553039 ANKS1AQ92625 1134 aa6.33□□□□□ -1.4
CKAP4-203ENST00000553039 NKD2Q969F2 451 aaPredicted RBP6.33□□□□□ -1.4
CKAP4-203ENST00000553039 COL26A1Q96A83 441 aa6.33□□□□□ -1.4
CKAP4-203ENST00000553039 DDX11Q96FC9 970 aa6.33□□□□□ -1.4
CKAP4-203ENST00000553039 SUCLG2Q96I99 432 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms