RNA–Protein interactions for RNA: ENST00000552984.1

TUBA1B-208, Transcript of tubulin alpha 1b, humanhuman

TSL 4

Gene TUBA1B, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-208ENST00000552984 CNTN2Q02246 1040 aa13.62□□□□□ -0.23
TUBA1B-208ENST00000552984 TLE2Q04725 743 aa13.62□□□□□ -0.23
TUBA1B-208ENST00000552984 MAMDC4Q6UXC1 1216 aa13.62□□□□□ -0.23
TUBA1B-208ENST00000552984 DEFB123Q8N688 67 aa13.62□□□□□ -0.23
TUBA1B-208ENST00000552984 EXOC6Q8TAG9 804 aa13.62□□□□□ -0.23
TUBA1B-208ENST00000552984 GMCL1Q96IK5 515 aa13.62□□□□□ -0.23
TUBA1B-208ENST00000552984 LBHD1Q9BQE6 289 aaPredicted RBP13.62□□□□□ -0.23
TUBA1B-208ENST00000552984 HELLSQ9NRZ9 838 aa13.62□□□□□ -0.23
TUBA1B-208ENST00000552984 TOMM22Q9NS69 142 aa13.62□□□□□ -0.23
TUBA1B-208ENST00000552984 RNF146Q9NTX7 359 aa13.62□□□□□ -0.23
TUBA1B-208ENST00000552984 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.62□□□□□ -0.23
TUBA1B-208ENST00000552984 PRKAG2Q9UGJ0 569 aa13.62□□□□□ -0.23
TUBA1B-208ENST00000552984 ANAPC4Q9UJX5 808 aa13.62□□□□□ -0.23
TUBA1B-208ENST00000552984 SYNGAP1Q96PV0 1343 aa13.62□□□□□ -0.23
TUBA1B-208ENST00000552984 TRIM43BA6NCK2 446 aa13.61□□□□□ -0.23
TUBA1B-208ENST00000552984 TRIM6-TRIM34B2RNG4 842 aa13.61□□□□□ -0.23
TUBA1B-208ENST00000552984 FGAP02671 866 aa13.61□□□□□ -0.23
TUBA1B-208ENST00000552984 HSPD1P10809 573 aaKnown RBP13.61□□□□□ -0.23
TUBA1B-208ENST00000552984 ITGB8P26012 769 aa13.61□□□□□ -0.23
TUBA1B-208ENST00000552984 CCDC96Q2M329 555 aa13.61□□□□□ -0.23
TUBA1B-208ENST00000552984 MCMDC2Q4G0Z9 681 aa13.61□□□□□ -0.23
TUBA1B-208ENST00000552984 MUM1L1Q5H9M0 696 aa13.61□□□□□ -0.23
TUBA1B-208ENST00000552984 C9orf50Q5SZB4 431 aa13.61□□□□□ -0.23
TUBA1B-208ENST00000552984 TTBK2Q6IQ55 1244 aa13.61□□□□□ -0.23
TUBA1B-208ENST00000552984 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.61□□□□□ -0.23
TUBA1B-208ENST00000552984 ARMCX2Q7L311 632 aa13.61□□□□□ -0.23
TUBA1B-208ENST00000552984 TBC1D10CQ8IV04 446 aa13.61□□□□□ -0.23
TUBA1B-208ENST00000552984 SMC5Q8IY18 1101 aa13.61□□□□□ -0.23
TUBA1B-208ENST00000552984 CHST13Q8NET6 341 aa13.61□□□□□ -0.23
TUBA1B-208ENST00000552984 STAG1Q8WVM7 1258 aa13.61□□□□□ -0.23
TUBA1B-208ENST00000552984 BADQ92934 168 aa13.61□□□□□ -0.23
TUBA1B-208ENST00000552984 RILPL2Q969X0 211 aa13.61□□□□□ -0.23
TUBA1B-208ENST00000552984 TRIM43Q96BQ3 446 aaPredicted RBP13.61□□□□□ -0.23
TUBA1B-208ENST00000552984 A1CFQ9NQ94 594 aaKnown RBP13.61□□□□□ -0.23
TUBA1B-208ENST00000552984 PRR12Q9ULL5 1215 aa13.61□□□□□ -0.23
TUBA1B-208ENST00000552984 ASTN1O14525 1302 aa13.61□□□□□ -0.23
TUBA1B-208ENST00000552984 CCDC171Q6TFL3 1326 aa13.61□□□□□ -0.23
TUBA1B-208ENST00000552984 CDH23Q9H251 3354 aa13.6□□□□□ -0.23
TUBA1B-208ENST00000552984 ORC4O43929 436 aa13.6□□□□□ -0.23
TUBA1B-208ENST00000552984 PQBP1O60828 265 aaKnown RBP13.6□□□□□ -0.23
TUBA1B-208ENST00000552984 ALAS1P13196 640 aa13.6□□□□□ -0.23
TUBA1B-208ENST00000552984 SLC16A2P36021 539 aa13.6□□□□□ -0.23
TUBA1B-208ENST00000552984 OAZ1P54368 228 aa13.6□□□□□ -0.23
TUBA1B-208ENST00000552984 ACVR2BQ13705 512 aa13.6□□□□□ -0.23
TUBA1B-208ENST00000552984 ALX1Q15699 326 aa13.6□□□□□ -0.23
TUBA1B-208ENST00000552984 CCDC144BQ3MJ40 725 aa13.6□□□□□ -0.23
TUBA1B-208ENST00000552984 RNF180Q86T96 592 aa13.6□□□□□ -0.23
TUBA1B-208ENST00000552984 FAM160B2Q86V87 743 aa13.6□□□□□ -0.23
TUBA1B-208ENST00000552984 CCDC144CPQ8IYA2 1237 aa13.6□□□□□ -0.23
TUBA1B-208ENST00000552984 PURBQ96QR8 312 aaKnown RBP13.6□□□□□ -0.23
TUBA1B-208ENST00000552984 KATNBL1Q9H079 304 aa13.6□□□□□ -0.23
TUBA1B-208ENST00000552984 ACAD9Q9H845 621 aa13.6□□□□□ -0.23
TUBA1B-208ENST00000552984 FBXO40Q9UH90 709 aa13.6□□□□□ -0.23
TUBA1B-208ENST00000552984 FRMPD2Q68DX3 1309 aaPredicted RBP13.6□□□□□ -0.23
TUBA1B-208ENST00000552984 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.59□□□□□ -0.23
TUBA1B-208ENST00000552984 SOWAHBA6NEL2 793 aa13.59□□□□□ -0.23
TUBA1B-208ENST00000552984 FGRP09769 529 aa13.59□□□□□ -0.23
TUBA1B-208ENST00000552984 NOVP48745 357 aa13.59□□□□□ -0.23
TUBA1B-208ENST00000552984 ACLYP53396 1101 aa13.59□□□□□ -0.23
TUBA1B-208ENST00000552984 SHHQ15465 462 aa13.59□□□□□ -0.23
TUBA1B-208ENST00000552984 RCSD1Q6JBY9 416 aa13.59□□□□□ -0.23
TUBA1B-208ENST00000552984 ZNF467Q7Z7K2 595 aaPredicted RBP13.59□□□□□ -0.23
TUBA1B-208ENST00000552984 PLEKHM2Q8IWE5 1019 aa13.59□□□□□ -0.23
TUBA1B-208ENST00000552984 MSL3Q8N5Y2 521 aaKnown RBP13.59□□□□□ -0.23
TUBA1B-208ENST00000552984 FAM133AQ8N9E0 248 aa13.59□□□□□ -0.23
TUBA1B-208ENST00000552984 KLHDC9Q8NEP7 349 aa13.59□□□□□ -0.23
TUBA1B-208ENST00000552984 CHURC1Q8WUH1 139 aa13.59□□□□□ -0.23
TUBA1B-208ENST00000552984 TRERF1Q96PN7 1200 aa13.59□□□□□ -0.23
TUBA1B-208ENST00000552984 FAM184BQ9ULE4 1060 aa13.59□□□□□ -0.23
TUBA1B-208ENST00000552984 EYSQ5T1H1 3165 aa13.59□□□□□ -0.23
TUBA1B-208ENST00000552984 NEDD4P46934 1319 aa13.59□□□□□ -0.23
TUBA1B-208ENST00000552984 POTEB2H3BUK9 544 aa13.58□□□□□ -0.24
TUBA1B-208ENST00000552984 C6orf222P0C671 652 aaPredicted RBP13.58□□□□□ -0.24
TUBA1B-208ENST00000552984 EPHB4P54760 987 aa13.58□□□□□ -0.24
TUBA1B-208ENST00000552984 KCNA10Q16322 511 aa13.58□□□□□ -0.24
TUBA1B-208ENST00000552984 C1orf53Q5VUE5 145 aa13.58□□□□□ -0.24
TUBA1B-208ENST00000552984 CCSAPQ6IQ19 270 aaPredicted RBP13.58□□□□□ -0.24
TUBA1B-208ENST00000552984 CHD1LQ86WJ1 897 aa13.58□□□□□ -0.24
TUBA1B-208ENST00000552984 FAM161BQ96MY7 647 aa13.58□□□□□ -0.24
TUBA1B-208ENST00000552984 TMEM47Q9BQJ4 181 aa13.58□□□□□ -0.24
TUBA1B-208ENST00000552984 ABHD16BQ9H3Z7 469 aa13.58□□□□□ -0.24
TUBA1B-208ENST00000552984 GPCPD1Q9NPB8 672 aa13.58□□□□□ -0.24
TUBA1B-208ENST00000552984 STARD7Q9NQZ5 370 aa13.58□□□□□ -0.24
TUBA1B-208ENST00000552984 MTMR10Q9NXD2 777 aa13.58□□□□□ -0.24
TUBA1B-208ENST00000552984 CCPG1Q9ULG6 757 aa13.58□□□□□ -0.24
TUBA1B-208ENST00000552984 KIAA1217Q5T5P2 1943 aa13.57□□□□□ -0.24
TUBA1B-208ENST00000552984 CTAGE5O15320 804 aa13.57□□□□□ -0.24
TUBA1B-208ENST00000552984 PLA2G6O60733 806 aa13.57□□□□□ -0.24
TUBA1B-208ENST00000552984 DUSP11O75319 330 aaKnown RBP13.57□□□□□ -0.24
TUBA1B-208ENST00000552984 CLTBP09497 229 aa13.57□□□□□ -0.24
TUBA1B-208ENST00000552984 SDSP20132 328 aa13.57□□□□□ -0.24
TUBA1B-208ENST00000552984 BEX3Q00994 111 aa13.57□□□□□ -0.24
TUBA1B-208ENST00000552984 NUCB1Q02818 461 aa13.57□□□□□ -0.24
TUBA1B-208ENST00000552984 TMEM63BQ5T3F8 832 aa13.57□□□□□ -0.24
TUBA1B-208ENST00000552984 GPR153Q6NV75 609 aa13.57□□□□□ -0.24
TUBA1B-208ENST00000552984 NSMFQ6X4W1 530 aa13.57□□□□□ -0.24
TUBA1B-208ENST00000552984 EEPD1Q7L9B9 569 aa13.57□□□□□ -0.24
TUBA1B-208ENST00000552984 DCAF4Q8WV16 495 aa13.57□□□□□ -0.24
TUBA1B-208ENST00000552984 ZKSCAN3Q9BRR0 538 aa13.57□□□□□ -0.24
TUBA1B-208ENST00000552984 RWDD1Q9H446 243 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms