RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 MAP2K5Q13163 448 aa13.68□□□□□ -0.22
TRAFD1-209ENST00000552896 GRM4Q14833 912 aa13.68□□□□□ -0.22
TRAFD1-209ENST00000552896 DHX32Q7L7V1 743 aaKnown RBP13.68□□□□□ -0.22
TRAFD1-209ENST00000552896 CATIPQ7Z7H3 387 aa13.68□□□□□ -0.22
TRAFD1-209ENST00000552896 NBPF11Q86T75 865 aa13.68□□□□□ -0.22
TRAFD1-209ENST00000552896 TRMT44Q8IYL2 757 aaKnown RBP13.68□□□□□ -0.22
TRAFD1-209ENST00000552896 TMTC2Q8N394 836 aa13.68□□□□□ -0.22
TRAFD1-209ENST00000552896 ZNF333Q96JL9 665 aa13.68□□□□□ -0.22
TRAFD1-209ENST00000552896 MAP3K14Q99558 947 aa13.68□□□□□ -0.22
TRAFD1-209ENST00000552896 SENP2Q9HC62 589 aa13.68□□□□□ -0.22
TRAFD1-209ENST00000552896 RAVER2Q9HCJ3 691 aaKnown RBP13.68□□□□□ -0.22
TRAFD1-209ENST00000552896 PNMA2Q9UL42 364 aa13.68□□□□□ -0.22
TRAFD1-209ENST00000552896 HMGCRP04035 888 aa13.67□□□□□ -0.22
TRAFD1-209ENST00000552896 ICAM1P05362 532 aa13.67□□□□□ -0.22
TRAFD1-209ENST00000552896 HOXC6P09630 235 aa13.67□□□□□ -0.22
TRAFD1-209ENST00000552896 GOLGA8HP0CJ92 632 aa13.67□□□□□ -0.22
TRAFD1-209ENST00000552896 FCER1AP12319 257 aa13.67□□□□□ -0.22
TRAFD1-209ENST00000552896 ADORA2AP29274 412 aa13.67□□□□□ -0.22
TRAFD1-209ENST00000552896 EXOSC10Q01780 885 aaKnown RBP13.67□□□□□ -0.22
TRAFD1-209ENST00000552896 TROAPQ12815 778 aa13.67□□□□□ -0.22
TRAFD1-209ENST00000552896 TKFCQ3LXA3 575 aa13.67□□□□□ -0.22
TRAFD1-209ENST00000552896 SGMS1Q86VZ5 419 aa13.67□□□□□ -0.22
TRAFD1-209ENST00000552896 ZNF654Q8IZM8 581 aa13.67□□□□□ -0.22
TRAFD1-209ENST00000552896 CPXCR1Q8N123 301 aa13.67□□□□□ -0.22
TRAFD1-209ENST00000552896 CHST13Q8NET6 341 aa13.67□□□□□ -0.22
TRAFD1-209ENST00000552896 JAKMIP1Q96N16 626 aaKnown RBP13.67□□□□□ -0.22
TRAFD1-209ENST00000552896 FBXO40Q9UH90 709 aa13.67□□□□□ -0.22
TRAFD1-209ENST00000552896 MAD2L2Q9UI95 211 aa13.67□□□□□ -0.22
TRAFD1-209ENST00000552896 PALM3A6NDB9 673 aaPredicted RBP13.66□□□□□ -0.22
TRAFD1-209ENST00000552896 CCDC69A6NI79 296 aa13.66□□□□□ -0.22
TRAFD1-209ENST00000552896 CALM1P0DP23 149 aa13.66□□□□□ -0.22
TRAFD1-209ENST00000552896 CALM2P0DP24 149 aa13.66□□□□□ -0.22
TRAFD1-209ENST00000552896 CALM3P0DP25 149 aa13.66□□□□□ -0.22
TRAFD1-209ENST00000552896 ELNP15502 786 aa13.66□□□□□ -0.22
TRAFD1-209ENST00000552896 PSMA5P28066 241 aa13.66□□□□□ -0.22
TRAFD1-209ENST00000552896 CCDC174Q6PII3 467 aa13.66□□□□□ -0.22
TRAFD1-209ENST00000552896 NFXL1Q6ZNB6 911 aa13.66□□□□□ -0.22
TRAFD1-209ENST00000552896 SH3TC2Q8TF17 1288 aa13.66□□□□□ -0.22
TRAFD1-209ENST00000552896 TRIB2Q92519 343 aa13.66□□□□□ -0.22
TRAFD1-209ENST00000552896 MMP19Q99542 508 aa13.66□□□□□ -0.22
TRAFD1-209ENST00000552896 ACAD9Q9H845 621 aa13.66□□□□□ -0.22
TRAFD1-209ENST00000552896 GPHNQ9NQX3 736 aaPredicted RBP13.66□□□□□ -0.22
TRAFD1-209ENST00000552896 CCPG1Q9ULG6 757 aa13.66□□□□□ -0.22
TRAFD1-209ENST00000552896 RIPK3Q9Y572 518 aa13.66□□□□□ -0.22
TRAFD1-209ENST00000552896 KLRF2D3W0D1 207 aa13.65□□□□□ -0.22
TRAFD1-209ENST00000552896 INHAP05111 366 aa13.65□□□□□ -0.22
TRAFD1-209ENST00000552896 CASTP20810 708 aaKnown RBP13.65□□□□□ -0.22
TRAFD1-209ENST00000552896 CYP2B6P20813 491 aa13.65□□□□□ -0.22
TRAFD1-209ENST00000552896 KIF5BP33176 963 aa13.65□□□□□ -0.22
TRAFD1-209ENST00000552896 UBXN2AP68543 259 aa13.65□□□□□ -0.22
TRAFD1-209ENST00000552896 KCTD2Q14681 263 aa13.65□□□□□ -0.22
TRAFD1-209ENST00000552896 C8orf34Q49A92 452 aa13.65□□□□□ -0.22
TRAFD1-209ENST00000552896 BLOC1S2Q6QNY1 142 aa13.65□□□□□ -0.22
TRAFD1-209ENST00000552896 ADGRF4Q8IZF3 695 aa13.65□□□□□ -0.22
TRAFD1-209ENST00000552896 STAG2Q8N3U4 1231 aa13.65□□□□□ -0.22
TRAFD1-209ENST00000552896 CTCFLQ8NI51 663 aaPredicted RBP13.65□□□□□ -0.22
TRAFD1-209ENST00000552896 AGBL1Q96MI9 1066 aa13.65□□□□□ -0.22
TRAFD1-209ENST00000552896 LRRC2Q9BYS8 371 aa13.65□□□□□ -0.22
TRAFD1-209ENST00000552896 RNF146Q9NTX7 359 aa13.65□□□□□ -0.22
TRAFD1-209ENST00000552896 SLC5A4Q9NY91 659 aa13.65□□□□□ -0.22
TRAFD1-209ENST00000552896 PFASO15067 1338 aa13.64□□□□□ -0.23
TRAFD1-209ENST00000552896 KIAA1217Q5T5P2 1943 aa13.64□□□□□ -0.23
TRAFD1-209ENST00000552896 NID2Q14112 1375 aa13.64□□□□□ -0.23
TRAFD1-209ENST00000552896 RPS6KB1P23443 525 aa13.64□□□□□ -0.23
TRAFD1-209ENST00000552896 RCAN1P53805 252 aa13.64□□□□□ -0.23
TRAFD1-209ENST00000552896 ANAPC15P60006 121 aa13.64□□□□□ -0.23
TRAFD1-209ENST00000552896 SNAP25P60880 206 aa13.64□□□□□ -0.23
TRAFD1-209ENST00000552896 CDC37Q16543 378 aaPredicted RBP13.64□□□□□ -0.23
TRAFD1-209ENST00000552896 APOA5Q6Q788 366 aa13.64□□□□□ -0.23
TRAFD1-209ENST00000552896 FBXL16Q8N461 479 aa13.64□□□□□ -0.23
TRAFD1-209ENST00000552896 TCEANC2Q96MN5 208 aa13.64□□□□□ -0.23
TRAFD1-209ENST00000552896 MYL10Q9BUA6 226 aa13.64□□□□□ -0.23
TRAFD1-209ENST00000552896 TM6SF1Q9BZW5 370 aa13.64□□□□□ -0.23
TRAFD1-209ENST00000552896 UBA5Q9GZZ9 404 aa13.64□□□□□ -0.23
TRAFD1-209ENST00000552896 CPVLQ9H3G5 476 aa13.64□□□□□ -0.23
TRAFD1-209ENST00000552896 HOMER2Q9NSB8 354 aa13.64□□□□□ -0.23
TRAFD1-209ENST00000552896 GTF3C3Q9Y5Q9 886 aa13.64□□□□□ -0.23
TRAFD1-209ENST00000552896 SLC12A7Q9Y666 1083 aa13.64□□□□□ -0.23
TRAFD1-209ENST00000552896 CCDC85CA6NKD9 419 aa13.63□□□□□ -0.23
TRAFD1-209ENST00000552896 DHX16O60231 1041 aaKnown RBP13.63□□□□□ -0.23
TRAFD1-209ENST00000552896 COBLO75128 1261 aa13.63□□□□□ -0.23
TRAFD1-209ENST00000552896 IGHA2P01877 340 aa13.63□□□□□ -0.23
TRAFD1-209ENST00000552896 ALAS1P13196 640 aa13.63□□□□□ -0.23
TRAFD1-209ENST00000552896 OLFML2BQ68BL8 750 aa13.63□□□□□ -0.23
TRAFD1-209ENST00000552896 DPP9Q86TI2 863 aa13.63□□□□□ -0.23
TRAFD1-209ENST00000552896 NPLOC4Q8TAT6 608 aa13.63□□□□□ -0.23
TRAFD1-209ENST00000552896 NUP133Q8WUM0 1156 aa13.63□□□□□ -0.23
TRAFD1-209ENST00000552896 MTMR8Q96EF0 704 aa13.63□□□□□ -0.23
TRAFD1-209ENST00000552896 IL17RAQ96F46 866 aa13.63□□□□□ -0.23
TRAFD1-209ENST00000552896 TRERF1Q96PN7 1200 aa13.63□□□□□ -0.23
TRAFD1-209ENST00000552896 SPZ1Q9BXG8 430 aa13.63□□□□□ -0.23
TRAFD1-209ENST00000552896 AGXT2Q9BYV1 514 aa13.63□□□□□ -0.23
TRAFD1-209ENST00000552896 JMJD4Q9H9V9 463 aa13.63□□□□□ -0.23
TRAFD1-209ENST00000552896 BIN2Q9UBW5 565 aaPredicted RBP13.63□□□□□ -0.23
TRAFD1-209ENST00000552896 DIS3Q9Y2L1 958 aaKnown RBP13.63□□□□□ -0.23
TRAFD1-209ENST00000552896 DNAJC25-GNG10A0A024R161 153 aa13.62□□□□□ -0.23
TRAFD1-209ENST00000552896 CPA1P15085 419 aa13.62□□□□□ -0.23
TRAFD1-209ENST00000552896 SLC4A3P48751 1232 aa13.62□□□□□ -0.23
TRAFD1-209ENST00000552896 FGD1P98174 961 aa13.62□□□□□ -0.23
TRAFD1-209ENST00000552896 CCL14Q16627 93 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms