RNA–Protein interactions for RNA: ENST00000552872.5

MMP19-209, Transcript of matrix metallopeptidase 19, humanhuman

TSL 1 (best)

Gene MMP19, Length 2,350 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP19-209ENST00000552872 DDX41Q9UJV9 622 aaKnown RBP11.69□□□□□ -0.54
MMP19-209ENST00000552872 USP17L10C9JJH3 530 aa11.69□□□□□ -0.54
MMP19-209ENST00000552872 DDAH1O94760 285 aa11.69□□□□□ -0.54
MMP19-209ENST00000552872 CLSTN1O94985 981 aa11.69□□□□□ -0.54
MMP19-209ENST00000552872 NOVP48745 357 aa11.69□□□□□ -0.54
MMP19-209ENST00000552872 GRM4Q14833 912 aa11.69□□□□□ -0.54
MMP19-209ENST00000552872 TERF2Q15554 542 aa11.69□□□□□ -0.54
MMP19-209ENST00000552872 TMTC3Q6ZXV5 915 aa11.69□□□□□ -0.54
MMP19-209ENST00000552872 ANKS1AQ92625 1134 aa11.69□□□□□ -0.54
MMP19-209ENST00000552872 GBA2Q9HCG7 927 aaPredicted RBP11.69□□□□□ -0.54
MMP19-209ENST00000552872 EMILIN3Q9NT22 766 aa11.69□□□□□ -0.54
MMP19-209ENST00000552872 PAPPA2Q9BXP8 1791 aa11.68□□□□□ -0.54
MMP19-209ENST00000552872 FUT2Q10981 343 aa11.68□□□□□ -0.54
MMP19-209ENST00000552872 TREML2Q5T2D2 321 aa11.68□□□□□ -0.54
MMP19-209ENST00000552872 FAM173BQ6P4H8 233 aa11.68□□□□□ -0.54
MMP19-209ENST00000552872 ZNF280CQ8ND82 737 aa11.68□□□□□ -0.54
MMP19-209ENST00000552872 KIFC2Q96AC6 838 aa11.68□□□□□ -0.54
MMP19-209ENST00000552872 PIGSQ96S52 555 aa11.68□□□□□ -0.54
MMP19-209ENST00000552872 TANGO6Q9C0B7 1094 aa11.68□□□□□ -0.54
MMP19-209ENST00000552872 TSPYL1Q9H0U9 437 aa11.68□□□□□ -0.54
MMP19-209ENST00000552872 KCNJ14Q9UNX9 436 aa11.68□□□□□ -0.54
MMP19-209ENST00000552872 TMX2Q9Y320 296 aa11.68□□□□□ -0.54
MMP19-209ENST00000552872 PALM3A6NDB9 673 aaPredicted RBP11.68□□□□□ -0.54
MMP19-209ENST00000552872 SYT1P21579 422 aa11.68□□□□□ -0.54
MMP19-209ENST00000552872 HUNKP57058 714 aa11.68□□□□□ -0.54
MMP19-209ENST00000552872 ZNF543Q08ER8 600 aa11.68□□□□□ -0.54
MMP19-209ENST00000552872 SYCP1Q15431 976 aa11.68□□□□□ -0.54
MMP19-209ENST00000552872 PLCD4Q9BRC7 762 aa11.68□□□□□ -0.54
MMP19-209ENST00000552872 VPS54Q9P1Q0 977 aa11.68□□□□□ -0.54
MMP19-209ENST00000552872 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.68□□□□□ -0.54
MMP19-209ENST00000552872 MORC2Q9Y6X9 1032 aaPredicted RBP11.68□□□□□ -0.54
MMP19-209ENST00000552872 CNTNAP5Q8WYK1 1306 aa11.67□□□□□ -0.54
MMP19-209ENST00000552872 PTPRFP10586 1907 aa11.67□□□□□ -0.54
MMP19-209ENST00000552872 TULP2O00295 520 aa11.67□□□□□ -0.54
MMP19-209ENST00000552872 GADD45BO75293 160 aaPredicted RBP11.67□□□□□ -0.54
MMP19-209ENST00000552872 VCAM1P19320 739 aa11.67□□□□□ -0.54
MMP19-209ENST00000552872 LARP1BQ659C4 914 aaKnown RBP11.67□□□□□ -0.54
MMP19-209ENST00000552872 GADL1Q6ZQY3 521 aa11.67□□□□□ -0.54
MMP19-209ENST00000552872 ARMC9Q7Z3E5 817 aa11.67□□□□□ -0.54
MMP19-209ENST00000552872 ANKRD13AQ8IZ07 590 aa11.67□□□□□ -0.54
MMP19-209ENST00000552872 ADGRF4Q8IZF3 695 aa11.67□□□□□ -0.54
MMP19-209ENST00000552872 TMEM87AQ8NBN3 555 aa11.67□□□□□ -0.54
MMP19-209ENST00000552872 MKL1Q969V6 931 aa11.67□□□□□ -0.54
MMP19-209ENST00000552872 HOOK2Q96ED9 719 aa11.67□□□□□ -0.54
MMP19-209ENST00000552872 PYCARDQ9ULZ3 195 aa11.67□□□□□ -0.54
MMP19-209ENST00000552872 AFG3L2Q9Y4W6 797 aa11.67□□□□□ -0.54
MMP19-209ENST00000552872 TRPM7Q96QT4 1865 aa11.67□□□□□ -0.54
MMP19-209ENST00000552872 BMP3P12645 472 aa11.67□□□□□ -0.54
MMP19-209ENST00000552872 CAPN2P17655 700 aa11.67□□□□□ -0.54
MMP19-209ENST00000552872 BACE1P56817 501 aa11.67□□□□□ -0.54
MMP19-209ENST00000552872 SSRP1Q08945 709 aaKnown RBP11.67□□□□□ -0.54
MMP19-209ENST00000552872 USH1GQ495M9 461 aa11.67□□□□□ -0.54
MMP19-209ENST00000552872 CCDC174Q6PII3 467 aa11.67□□□□□ -0.54
MMP19-209ENST00000552872 SLC10A4Q96EP9 437 aa11.67□□□□□ -0.54
MMP19-209ENST00000552872 VCPKMTQ9H867 229 aa11.67□□□□□ -0.54
MMP19-209ENST00000552872 CALCOCO1Q9P1Z2 691 aa11.67□□□□□ -0.54
MMP19-209ENST00000552872 PKN1Q16512 942 aa11.66□□□□□ -0.54
MMP19-209ENST00000552872 CCDC178Q5BJE1 867 aa11.66□□□□□ -0.54
MMP19-209ENST00000552872 TYW1BQ6NUM6 668 aa11.66□□□□□ -0.54
MMP19-209ENST00000552872 HEATR3Q7Z4Q2 680 aa11.66□□□□□ -0.54
MMP19-209ENST00000552872 C2orf69Q8N8R5 385 aa11.66□□□□□ -0.54
MMP19-209ENST00000552872 SMARCC2Q8TAQ2 1214 aa11.66□□□□□ -0.54
MMP19-209ENST00000552872 COA7Q96BR5 231 aa11.66□□□□□ -0.54
MMP19-209ENST00000552872 ALG1Q9BT22 464 aa11.66□□□□□ -0.54
MMP19-209ENST00000552872 MTA3Q9BTC8 594 aa11.66□□□□□ -0.54
MMP19-209ENST00000552872 KCNF1Q9H3M0 494 aa11.66□□□□□ -0.54
MMP19-209ENST00000552872 RPAP3Q9H6T3 665 aaPredicted RBP11.66□□□□□ -0.54
MMP19-209ENST00000552872 GDPD2Q9HCC8 539 aa11.66□□□□□ -0.54
MMP19-209ENST00000552872 GOPCQ9HD26 462 aa11.66□□□□□ -0.54
MMP19-209ENST00000552872 ABT1Q9ULW3 272 aaKnown RBP11.66□□□□□ -0.54
MMP19-209ENST00000552872 PPP1R11O60927 126 aaPredicted RBP11.65□□□□□ -0.54
MMP19-209ENST00000552872 SNHG28P0DPA3 235 aa11.65□□□□□ -0.54
MMP19-209ENST00000552872 IFNAR1P17181 557 aa11.65□□□□□ -0.54
MMP19-209ENST00000552872 KIF5BP33176 963 aa11.65□□□□□ -0.54
MMP19-209ENST00000552872 NOM1Q5C9Z4 860 aaKnown RBP11.65□□□□□ -0.54
MMP19-209ENST00000552872 FAM43BQ6ZT52 329 aaPredicted RBP11.65□□□□□ -0.54
MMP19-209ENST00000552872 WDR33Q9C0J8 1336 aaKnown RBP11.65□□□□□ -0.54
MMP19-209ENST00000552872 MKI67P46013 3256 aaKnown RBP11.65□□□□□ -0.54
MMP19-209ENST00000552872 GOLGA6L6A8MZA4 724 aa11.65□□□□□ -0.54
MMP19-209ENST00000552872 FLOT1O75955 427 aa11.65□□□□□ -0.54
MMP19-209ENST00000552872 FMNL1O95466 1100 aaPredicted RBP11.65□□□□□ -0.54
MMP19-209ENST00000552872 CALM1P0DP23 149 aa11.65□□□□□ -0.54
MMP19-209ENST00000552872 CALM2P0DP24 149 aa11.65□□□□□ -0.54
MMP19-209ENST00000552872 CALM3P0DP25 149 aa11.65□□□□□ -0.54
MMP19-209ENST00000552872 LDLRAD1Q5T700 205 aa11.65□□□□□ -0.54
MMP19-209ENST00000552872 GMCL1P1Q8NEA9 526 aa11.65□□□□□ -0.54
MMP19-209ENST00000552872 KIF18AQ8NI77 898 aa11.65□□□□□ -0.54
MMP19-209ENST00000552872 ZIC5Q96T25 663 aa11.65□□□□□ -0.54
MMP19-209ENST00000552872 JMJD4Q9H9V9 463 aa11.65□□□□□ -0.54
MMP19-209ENST00000552872 TCHHQ07283 1943 aa11.64□□□□□ -0.55
MMP19-209ENST00000552872 ERICH4A6NGS2 130 aa11.64□□□□□ -0.55
MMP19-209ENST00000552872 CPXCR1Q8N123 301 aa11.64□□□□□ -0.55
MMP19-209ENST00000552872 KRT222Q8N1A0 295 aa11.64□□□□□ -0.55
MMP19-209ENST00000552872 EFCC1Q9HA90 598 aa11.64□□□□□ -0.55
MMP19-209ENST00000552872 CCDC196A0A1B0GTZ2 297 aa11.64□□□□□ -0.55
MMP19-209ENST00000552872 STX6O43752 255 aa11.64□□□□□ -0.55
MMP19-209ENST00000552872 ZNF157P51786 506 aaPredicted RBP11.64□□□□□ -0.55
MMP19-209ENST00000552872 AKAP17AQ02040 695 aaKnown RBP11.64□□□□□ -0.55
MMP19-209ENST00000552872 NOL9Q5SY16 702 aaKnown RBP11.64□□□□□ -0.55
MMP19-209ENST00000552872 WWC2Q6AWC2 1192 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms