RNA–Protein interactions for RNA: ENST00000552713.5

CDK4-213, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-213ENST00000552713 PSRC1Q6PGN9 363 aaPredicted RBP10.24□□□□□ -0.77
CDK4-213ENST00000552713 TMED8Q6PL24 325 aaPredicted RBP10.24□□□□□ -0.77
CDK4-213ENST00000552713 OTOP2Q7RTS6 562 aa10.24□□□□□ -0.77
CDK4-213ENST00000552713 TMEM199Q8N511 208 aa10.24□□□□□ -0.77
CDK4-213ENST00000552713 VTI1AQ96AJ9 217 aa10.24□□□□□ -0.77
CDK4-213ENST00000552713 UPF3AQ9H1J1 476 aaKnown RBP10.24□□□□□ -0.77
CDK4-213ENST00000552713 IL23AQ9NPF7 189 aa10.24□□□□□ -0.77
CDK4-213ENST00000552713 MSRAQ9UJ68 235 aa10.24□□□□□ -0.77
CDK4-213ENST00000552713 ASTN1O14525 1302 aa10.24□□□□□ -0.77
CDK4-213ENST00000552713 MROH7Q68CQ1 1323 aa10.24□□□□□ -0.77
CDK4-213ENST00000552713 SYNGAP1Q96PV0 1343 aa10.24□□□□□ -0.77
CDK4-213ENST00000552713 A0A0U1RQG5 324 aaPredicted RBP10.23□□□□□ -0.77
CDK4-213ENST00000552713 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.23□□□□□ -0.77
CDK4-213ENST00000552713 USP17L12C9JPN9 530 aa10.23□□□□□ -0.77
CDK4-213ENST00000552713 USP17L21D6R901 530 aa10.23□□□□□ -0.77
CDK4-213ENST00000552713 APBB1O00213 710 aa10.23□□□□□ -0.77
CDK4-213ENST00000552713 RFXAPO00287 272 aa10.23□□□□□ -0.77
CDK4-213ENST00000552713 MBD4O95243 580 aa10.23□□□□□ -0.77
CDK4-213ENST00000552713 SLC4A3P48751 1232 aa10.23□□□□□ -0.77
CDK4-213ENST00000552713 GJA9P57773 515 aa10.23□□□□□ -0.77
CDK4-213ENST00000552713 RAB30Q15771 203 aa10.23□□□□□ -0.77
CDK4-213ENST00000552713 GNASQ5JWF2 1037 aa10.23□□□□□ -0.77
CDK4-213ENST00000552713 ZKSCAN2Q63HK3 967 aa10.23□□□□□ -0.77
CDK4-213ENST00000552713 SNRNP48Q6IEG0 339 aaKnown RBP10.23□□□□□ -0.77
CDK4-213ENST00000552713 CEP85Q6P2H3 762 aa10.23□□□□□ -0.77
CDK4-213ENST00000552713 C16orf86Q6ZW13 317 aa10.23□□□□□ -0.77
CDK4-213ENST00000552713 MICALL1Q8N3F8 863 aa10.23□□□□□ -0.77
CDK4-213ENST00000552713 MSL3Q8N5Y2 521 aaKnown RBP10.23□□□□□ -0.77
CDK4-213ENST00000552713 DDX11Q96FC9 970 aa10.23□□□□□ -0.77
CDK4-213ENST00000552713 CCDC17Q96LX7 622 aa10.23□□□□□ -0.77
CDK4-213ENST00000552713 DNAJC2Q99543 621 aaKnown RBP10.23□□□□□ -0.77
CDK4-213ENST00000552713 KATNBL1Q9H079 304 aa10.23□□□□□ -0.77
CDK4-213ENST00000552713 EPHX3Q9H6B9 360 aa10.23□□□□□ -0.77
CDK4-213ENST00000552713 SH2D4AQ9H788 454 aa10.23□□□□□ -0.77
CDK4-213ENST00000552713 KANSL2Q9H9L4 492 aa10.23□□□□□ -0.77
CDK4-213ENST00000552713 SLC28A3Q9HAS3 691 aa10.23□□□□□ -0.77
CDK4-213ENST00000552713 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.23□□□□□ -0.77
CDK4-213ENST00000552713 DDX49Q9Y6V7 483 aaKnown RBP10.23□□□□□ -0.77
CDK4-213ENST00000552713 GRIN2DO15399 1336 aa10.23□□□□□ -0.77
CDK4-213ENST00000552713 FGBP02675 491 aa10.22□□□□□ -0.77
CDK4-213ENST00000552713 CCL23P55773 120 aa10.22□□□□□ -0.77
CDK4-213ENST00000552713 TTF1Q15361 905 aaPredicted RBP10.22□□□□□ -0.77
CDK4-213ENST00000552713 KRT40Q6A162 431 aa10.22□□□□□ -0.77
CDK4-213ENST00000552713 CCDC174Q6PII3 467 aa10.22□□□□□ -0.77
CDK4-213ENST00000552713 ARMCX2Q7L311 632 aa10.22□□□□□ -0.77
CDK4-213ENST00000552713 CPXCR1Q8N123 301 aa10.22□□□□□ -0.77
CDK4-213ENST00000552713 PCSK9Q8NBP7 692 aaKnown RBP10.22□□□□□ -0.77
CDK4-213ENST00000552713 SLF1Q9BQI6 1058 aa10.22□□□□□ -0.77
CDK4-213ENST00000552713 TEX13BQ9BXU2 312 aa10.22□□□□□ -0.77
CDK4-213ENST00000552713 WNT8AQ9H1J5 351 aa10.22□□□□□ -0.77
CDK4-213ENST00000552713 RAVER2Q9HCJ3 691 aaKnown RBP10.22□□□□□ -0.77
CDK4-213ENST00000552713 GOPCQ9HD26 462 aa10.22□□□□□ -0.77
CDK4-213ENST00000552713 COL4A4P53420 1690 aaPredicted RBP10.22□□□□□ -0.77
CDK4-213ENST00000552713 EPOPA6NHQ4 379 aa10.21□□□□□ -0.77
CDK4-213ENST00000552713 TLR3O15455 904 aaKnown RBP10.21□□□□□ -0.77
CDK4-213ENST00000552713 COPB2P35606 906 aa10.21□□□□□ -0.77
CDK4-213ENST00000552713 ADD2P35612 726 aa10.21□□□□□ -0.77
CDK4-213ENST00000552713 CNTN2Q02246 1040 aa10.21□□□□□ -0.77
CDK4-213ENST00000552713 TMEM63BQ5T3F8 832 aa10.21□□□□□ -0.77
CDK4-213ENST00000552713 CTR9Q6PD62 1173 aa10.21□□□□□ -0.77
CDK4-213ENST00000552713 CXCL17Q6UXB2 119 aa10.21□□□□□ -0.77
CDK4-213ENST00000552713 ZNF467Q7Z7K2 595 aaPredicted RBP10.21□□□□□ -0.77
CDK4-213ENST00000552713 ITPRIPQ8IWB1 547 aa10.21□□□□□ -0.77
CDK4-213ENST00000552713 CCDC144CPQ8IYA2 1237 aa10.21□□□□□ -0.77
CDK4-213ENST00000552713 STK11IPQ8N1F8 1099 aa10.21□□□□□ -0.77
CDK4-213ENST00000552713 SLC43A3Q8NBI5 491 aa10.21□□□□□ -0.77
CDK4-213ENST00000552713 IL27Q8NEV9 243 aa10.21□□□□□ -0.77
CDK4-213ENST00000552713 RHPN1Q8TCX5 695 aa10.21□□□□□ -0.77
CDK4-213ENST00000552713 KHSRPQ92945 711 aaKnown RBP eCLIP10.21□□□□□ -0.77
CDK4-213ENST00000552713 LRFN3Q9BTN0 628 aa10.21□□□□□ -0.77
CDK4-213ENST00000552713 NOC4LQ9BVI4 516 aaKnown RBP10.21□□□□□ -0.77
CDK4-213ENST00000552713 BCL11AQ9H165 835 aa10.21□□□□□ -0.77
CDK4-213ENST00000552713 TRPV6Q9H1D0 765 aa10.21□□□□□ -0.77
CDK4-213ENST00000552713 ABHD16BQ9H3Z7 469 aa10.21□□□□□ -0.77
CDK4-213ENST00000552713 HIPK3Q9H422 1215 aa10.21□□□□□ -0.77
CDK4-213ENST00000552713 ATP8A2Q9NTI2 1148 aa10.21□□□□□ -0.77
CDK4-213ENST00000552713 RBAK-RBAKDNI3L0D1 243 aa10.2□□□□□ -0.78
CDK4-213ENST00000552713 B4GALT4O60513 344 aa10.2□□□□□ -0.78
CDK4-213ENST00000552713 ARHGEF15O94989 841 aa10.2□□□□□ -0.78
CDK4-213ENST00000552713 NDUFB10O96000 172 aa10.2□□□□□ -0.78
CDK4-213ENST00000552713 PSMC6P62333 389 aa10.2□□□□□ -0.78
CDK4-213ENST00000552713 NKX3-2P78367 333 aa10.2□□□□□ -0.78
CDK4-213ENST00000552713 PPP2R2DQ66LE6 453 aa10.2□□□□□ -0.78
CDK4-213ENST00000552713 ZBED9Q6R2W3 1325 aa10.2□□□□□ -0.78
CDK4-213ENST00000552713 MUC6Q6W4X9 2439 aa10.2□□□□□ -0.78
CDK4-213ENST00000552713 SCLYQ96I15 445 aa10.2□□□□□ -0.78
CDK4-213ENST00000552713 C1QTNF1Q9BXJ1 281 aa10.2□□□□□ -0.78
CDK4-213ENST00000552713 TANC1Q9C0D5 1861 aa10.2□□□□□ -0.78
CDK4-213ENST00000552713 CERS4Q9HA82 394 aa10.2□□□□□ -0.78
CDK4-213ENST00000552713 SCN10AQ9Y5Y9 1956 aa10.2□□□□□ -0.78
CDK4-213ENST00000552713 SPDYE4A6NLX3 237 aa10.19□□□□□ -0.78
CDK4-213ENST00000552713 F5H6K3 240 aa10.19□□□□□ -0.78
CDK4-213ENST00000552713 ATP2A1O14983 1001 aa10.19□□□□□ -0.78
CDK4-213ENST00000552713 RASA1P20936 1047 aa10.19□□□□□ -0.78
CDK4-213ENST00000552713 KLRC3Q07444 240 aa10.19□□□□□ -0.78
CDK4-213ENST00000552713 ITGA7Q13683 1181 aa10.19□□□□□ -0.78
CDK4-213ENST00000552713 TTLL4Q14679 1199 aa10.19□□□□□ -0.78
CDK4-213ENST00000552713 SKIV2LQ15477 1246 aaKnown RBP10.19□□□□□ -0.78
CDK4-213ENST00000552713 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.19□□□□□ -0.78
CDK4-213ENST00000552713 SPRED2Q7Z698 418 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms