RNA–Protein interactions for RNA: ENST00000552685.1

LINC00661-207, long intergenic non-protein coding RNA 661, humanhuman

TSL 4

Gene LINC00661, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-207ENST00000552685 GMCL1P1Q8NEA9 526 aa11.78□□□□□ -0.52
LINC00661-207ENST00000552685 AGBL1Q96MI9 1066 aa11.78□□□□□ -0.52
LINC00661-207ENST00000552685 CRBNQ96SW2 442 aa11.78□□□□□ -0.52
LINC00661-207ENST00000552685 ZNF287Q9HBT7 754 aa11.78□□□□□ -0.52
LINC00661-207ENST00000552685 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.78□□□□□ -0.52
LINC00661-207ENST00000552685 FAM184BQ9ULE4 1060 aa11.78□□□□□ -0.52
LINC00661-207ENST00000552685 SYNGAP1Q96PV0 1343 aa11.78□□□□□ -0.52
LINC00661-207ENST00000552685 PLIN4Q96Q06 1357 aa11.78□□□□□ -0.52
LINC00661-207ENST00000552685 C6orf222P0C671 652 aaPredicted RBP11.77□□□□□ -0.53
LINC00661-207ENST00000552685 RAG1P15918 1043 aa11.77□□□□□ -0.53
LINC00661-207ENST00000552685 IKQ13123 557 aaPredicted RBP11.77□□□□□ -0.53
LINC00661-207ENST00000552685 ACVR2BQ13705 512 aa11.77□□□□□ -0.53
LINC00661-207ENST00000552685 LRRFIP1Q32MZ4 808 aaKnown RBP11.77□□□□□ -0.53
LINC00661-207ENST00000552685 CCDC144BQ3MJ40 725 aa11.77□□□□□ -0.53
LINC00661-207ENST00000552685 ZNF697Q5TEC3 545 aa11.77□□□□□ -0.53
LINC00661-207ENST00000552685 ANKRD45Q5TZF3 282 aa11.77□□□□□ -0.53
LINC00661-207ENST00000552685 CCDC174Q6PII3 467 aa11.77□□□□□ -0.53
LINC00661-207ENST00000552685 MAMDC4Q6UXC1 1216 aa11.77□□□□□ -0.53
LINC00661-207ENST00000552685 KCTD1Q719H9 257 aa11.77□□□□□ -0.53
LINC00661-207ENST00000552685 ARMCX2Q7L311 632 aa11.77□□□□□ -0.53
LINC00661-207ENST00000552685 KLHDC9Q8NEP7 349 aa11.77□□□□□ -0.53
LINC00661-207ENST00000552685 CDX2Q99626 313 aaPredicted RBP11.77□□□□□ -0.53
LINC00661-207ENST00000552685 STARD7Q9NQZ5 370 aa11.77□□□□□ -0.53
LINC00661-207ENST00000552685 IL17RBQ9NRM6 502 aa11.77□□□□□ -0.53
LINC00661-207ENST00000552685 TMEM39AQ9NV64 488 aa11.77□□□□□ -0.53
LINC00661-207ENST00000552685 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.77□□□□□ -0.53
LINC00661-207ENST00000552685 KIAA0355O15063 1070 aa11.76□□□□□ -0.53
LINC00661-207ENST00000552685 DUSP11O75319 330 aaKnown RBP11.76□□□□□ -0.53
LINC00661-207ENST00000552685 SLC3A2P08195 630 aaKnown RBP11.76□□□□□ -0.53
LINC00661-207ENST00000552685 SLC1A4P43007 532 aa11.76□□□□□ -0.53
LINC00661-207ENST00000552685 RRP1P56182 461 aaKnown RBP11.76□□□□□ -0.53
LINC00661-207ENST00000552685 FAAP100Q0VG06 881 aa11.76□□□□□ -0.53
LINC00661-207ENST00000552685 CCSAPQ6IQ19 270 aaPredicted RBP11.76□□□□□ -0.53
LINC00661-207ENST00000552685 CCDC144CPQ8IYA2 1237 aa11.76□□□□□ -0.53
LINC00661-207ENST00000552685 MSL3Q8N5Y2 521 aaKnown RBP11.76□□□□□ -0.53
LINC00661-207ENST00000552685 CHST13Q8NET6 341 aa11.76□□□□□ -0.53
LINC00661-207ENST00000552685 TSEN34Q9BSV6 310 aaKnown RBP11.76□□□□□ -0.53
LINC00661-207ENST00000552685 RNF146Q9NTX7 359 aa11.76□□□□□ -0.53
LINC00661-207ENST00000552685 STX8Q9UNK0 236 aa11.76□□□□□ -0.53
LINC00661-207ENST00000552685 ZNF536O15090 1300 aa11.76□□□□□ -0.53
LINC00661-207ENST00000552685 SALL3Q9BXA9 1300 aa11.76□□□□□ -0.53
LINC00661-207ENST00000552685 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.75□□□□□ -0.53
LINC00661-207ENST00000552685 SOWAHBA6NEL2 793 aa11.75□□□□□ -0.53
LINC00661-207ENST00000552685 TSPY2A6NKD2 308 aa11.75□□□□□ -0.53
LINC00661-207ENST00000552685 RANBP6O60518 1105 aaKnown RBP11.75□□□□□ -0.53
LINC00661-207ENST00000552685 ASGR1P07306 291 aa11.75□□□□□ -0.53
LINC00661-207ENST00000552685 ALAS1P13196 640 aa11.75□□□□□ -0.53
LINC00661-207ENST00000552685 STAT2P52630 851 aa11.75□□□□□ -0.53
LINC00661-207ENST00000552685 BEX3Q00994 111 aa11.75□□□□□ -0.53
LINC00661-207ENST00000552685 MUM1L1Q5H9M0 696 aa11.75□□□□□ -0.53
LINC00661-207ENST00000552685 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.75□□□□□ -0.53
LINC00661-207ENST00000552685 ZNF467Q7Z7K2 595 aaPredicted RBP11.75□□□□□ -0.53
LINC00661-207ENST00000552685 STAG1Q8WVM7 1258 aa11.75□□□□□ -0.53
LINC00661-207ENST00000552685 VTI1AQ96AJ9 217 aa11.75□□□□□ -0.53
LINC00661-207ENST00000552685 RNPC3Q96LT9 517 aaKnown RBP11.75□□□□□ -0.53
LINC00661-207ENST00000552685 FAM227BQ96M60 508 aa11.75□□□□□ -0.53
LINC00661-207ENST00000552685 PURBQ96QR8 312 aaKnown RBP11.75□□□□□ -0.53
LINC00661-207ENST00000552685 KATNBL1Q9H079 304 aa11.75□□□□□ -0.53
LINC00661-207ENST00000552685 SEMA6BQ9H3T3 888 aa11.75□□□□□ -0.53
LINC00661-207ENST00000552685 ACAD9Q9H845 621 aa11.75□□□□□ -0.53
LINC00661-207ENST00000552685 A1CFQ9NQ94 594 aaKnown RBP11.75□□□□□ -0.53
LINC00661-207ENST00000552685 FBXO40Q9UH90 709 aa11.75□□□□□ -0.53
LINC00661-207ENST00000552685 CHD7Q9P2D1 2997 aa11.74□□□□□ -0.53
LINC00661-207ENST00000552685 A0A0D9SFI3 127 aa11.74□□□□□ -0.53
LINC00661-207ENST00000552685 MOXD2PA6NHM9 499 aa11.74□□□□□ -0.53
LINC00661-207ENST00000552685 DCDC2CA8MYV0 355 aa11.74□□□□□ -0.53
LINC00661-207ENST00000552685 CTAGE5O15320 804 aa11.74□□□□□ -0.53
LINC00661-207ENST00000552685 OAZ1P54368 228 aa11.74□□□□□ -0.53
LINC00661-207ENST00000552685 FPGSQ05932 587 aa11.74□□□□□ -0.53
LINC00661-207ENST00000552685 RRP12Q5JTH9 1297 aaKnown RBP11.74□□□□□ -0.53
LINC00661-207ENST00000552685 GNASQ5JWF2 1037 aa11.74□□□□□ -0.53
LINC00661-207ENST00000552685 TMEM63BQ5T3F8 832 aa11.74□□□□□ -0.53
LINC00661-207ENST00000552685 TTBK2Q6IQ55 1244 aa11.74□□□□□ -0.53
LINC00661-207ENST00000552685 NOL8Q76FK4 1167 aaKnown RBP11.74□□□□□ -0.53
LINC00661-207ENST00000552685 ANKRD33Q7Z3H0 272 aa11.74□□□□□ -0.53
LINC00661-207ENST00000552685 FAM160B2Q86V87 743 aa11.74□□□□□ -0.53
LINC00661-207ENST00000552685 FAM133AQ8N9E0 248 aa11.74□□□□□ -0.53
LINC00661-207ENST00000552685 USP38Q8NB14 1042 aa11.74□□□□□ -0.53
LINC00661-207ENST00000552685 CHURC1Q8WUH1 139 aa11.74□□□□□ -0.53
LINC00661-207ENST00000552685 NUP133Q8WUM0 1156 aa11.74□□□□□ -0.53
LINC00661-207ENST00000552685 MYLIPQ8WY64 445 aa11.74□□□□□ -0.53
LINC00661-207ENST00000552685 GMCL1Q96IK5 515 aa11.74□□□□□ -0.53
LINC00661-207ENST00000552685 TRERF1Q96PN7 1200 aa11.74□□□□□ -0.53
LINC00661-207ENST00000552685 UPF3AQ9H1J1 476 aaKnown RBP11.74□□□□□ -0.53
LINC00661-207ENST00000552685 ABHD16BQ9H3Z7 469 aa11.74□□□□□ -0.53
LINC00661-207ENST00000552685 PRR12Q9ULL5 1215 aa11.74□□□□□ -0.53
LINC00661-207ENST00000552685 SYNPO2Q9UMS6 1093 aa11.74□□□□□ -0.53
LINC00661-207ENST00000552685 ASTN1O14525 1302 aa11.74□□□□□ -0.53
LINC00661-207ENST00000552685 REV3LO60673 3130 aa11.73□□□□□ -0.53
LINC00661-207ENST00000552685 LCTP09848 1927 aa11.73□□□□□ -0.53
LINC00661-207ENST00000552685 SLC16A2P36021 539 aa11.73□□□□□ -0.53
LINC00661-207ENST00000552685 PDE1AP54750 535 aa11.73□□□□□ -0.53
LINC00661-207ENST00000552685 GJA9P57773 515 aa11.73□□□□□ -0.53
LINC00661-207ENST00000552685 CCDC96Q2M329 555 aa11.73□□□□□ -0.53
LINC00661-207ENST00000552685 RCSD1Q6JBY9 416 aa11.73□□□□□ -0.53
LINC00661-207ENST00000552685 EEPD1Q7L9B9 569 aa11.73□□□□□ -0.53
LINC00661-207ENST00000552685 GLT1D1Q96MS3 346 aa11.73□□□□□ -0.53
LINC00661-207ENST00000552685 TOX2Q96NM4 488 aa11.73□□□□□ -0.53
LINC00661-207ENST00000552685 PDGFCQ9NRA1 345 aa11.73□□□□□ -0.53
LINC00661-207ENST00000552685 TOMM22Q9NS69 142 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms