RNA–Protein interactions for RNA: ENST00000552282.1

CALCOCO1-220, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-220ENST00000552282 TSPY8P0CW00 308 aa19.16■□□□□ 0.66
CALCOCO1-220ENST00000552282 ITGB8P26012 769 aa19.16■□□□□ 0.66
CALCOCO1-220ENST00000552282 GJA9P57773 515 aa19.16■□□□□ 0.66
CALCOCO1-220ENST00000552282 ACVR2BQ13705 512 aa19.16■□□□□ 0.66
CALCOCO1-220ENST00000552282 TKFCQ3LXA3 575 aa19.16■□□□□ 0.66
CALCOCO1-220ENST00000552282 ZNF697Q5TEC3 545 aa19.16■□□□□ 0.66
CALCOCO1-220ENST00000552282 SLFN13Q68D06 897 aa19.16■□□□□ 0.66
CALCOCO1-220ENST00000552282 LRRC47Q8N1G4 583 aaKnown RBP19.16■□□□□ 0.66
CALCOCO1-220ENST00000552282 FAM133AQ8N9E0 248 aa19.16■□□□□ 0.66
CALCOCO1-220ENST00000552282 LENG1Q96BZ8 264 aaPredicted RBP19.16■□□□□ 0.66
CALCOCO1-220ENST00000552282 FSD1Q9BTV5 496 aa19.16■□□□□ 0.66
CALCOCO1-220ENST00000552282 RAVER2Q9HCJ3 691 aaKnown RBP19.16■□□□□ 0.66
CALCOCO1-220ENST00000552282 ZNF536O15090 1300 aa19.16■□□□□ 0.66
CALCOCO1-220ENST00000552282 SPTBN5Q9NRC6 3674 aaKnown RBP19.15■□□□□ 0.66
CALCOCO1-220ENST00000552282 FAAP100Q0VG06 881 aa19.15■□□□□ 0.66
CALCOCO1-220ENST00000552282 CPXCR1Q8N123 301 aa19.15■□□□□ 0.66
CALCOCO1-220ENST00000552282 OTUD7AQ8TE49 926 aaPredicted RBP19.15■□□□□ 0.66
CALCOCO1-220ENST00000552282 CHURC1Q8WUH1 139 aa19.15■□□□□ 0.66
CALCOCO1-220ENST00000552282 ACAD9Q9H845 621 aa19.15■□□□□ 0.66
CALCOCO1-220ENST00000552282 TBX21Q9UL17 535 aa19.15■□□□□ 0.66
CALCOCO1-220ENST00000552282 MROH7Q68CQ1 1323 aa19.15■□□□□ 0.66
CALCOCO1-220ENST00000552282 LCTP09848 1927 aa19.15■□□□□ 0.66
CALCOCO1-220ENST00000552282 ADCY6O43306 1168 aa19.14■□□□□ 0.65
CALCOCO1-220ENST00000552282 MYCNP04198 464 aaPredicted RBP19.14■□□□□ 0.65
CALCOCO1-220ENST00000552282 CDK7P50613 346 aa19.14■□□□□ 0.65
CALCOCO1-220ENST00000552282 TFAP4Q01664 338 aa19.14■□□□□ 0.65
CALCOCO1-220ENST00000552282 ALX1Q15699 326 aa19.14■□□□□ 0.65
CALCOCO1-220ENST00000552282 ARMCX2Q7L311 632 aa19.14■□□□□ 0.65
CALCOCO1-220ENST00000552282 STK11IPQ8N1F8 1099 aa19.14■□□□□ 0.65
CALCOCO1-220ENST00000552282 ANKRD35Q8N283 1001 aa19.14■□□□□ 0.65
CALCOCO1-220ENST00000552282 PCSK9Q8NBP7 692 aaKnown RBP19.14■□□□□ 0.65
CALCOCO1-220ENST00000552282 STAG1Q8WVM7 1258 aa19.14■□□□□ 0.65
CALCOCO1-220ENST00000552282 STARD7Q9NQZ5 370 aa19.14■□□□□ 0.65
CALCOCO1-220ENST00000552282 ZHX1Q9UKY1 873 aaPredicted RBP19.14■□□□□ 0.65
CALCOCO1-220ENST00000552282 CTDP1Q9Y5B0 961 aaPredicted RBP19.14■□□□□ 0.65
CALCOCO1-220ENST00000552282 ZMYM6O95789 1325 aa19.14■□□□□ 0.65
CALCOCO1-220ENST00000552282 CTAGE5O15320 804 aa19.13■□□□□ 0.65
CALCOCO1-220ENST00000552282 ORC4O43929 436 aa19.13■□□□□ 0.65
CALCOCO1-220ENST00000552282 KCNA10Q16322 511 aa19.13■□□□□ 0.65
CALCOCO1-220ENST00000552282 A1CFQ9NQ94 594 aaKnown RBP19.13■□□□□ 0.65
CALCOCO1-220ENST00000552282 MYADML2A6NDP7 307 aa19.12■□□□□ 0.65
CALCOCO1-220ENST00000552282 DCDC2CA8MYV0 355 aa19.12■□□□□ 0.65
CALCOCO1-220ENST00000552282 TMEM232C9JQI7 657 aa19.12■□□□□ 0.65
CALCOCO1-220ENST00000552282 RAG1P15918 1043 aa19.12■□□□□ 0.65
CALCOCO1-220ENST00000552282 SLC1A4P43007 532 aa19.12■□□□□ 0.65
CALCOCO1-220ENST00000552282 CCDC144BQ3MJ40 725 aa19.12■□□□□ 0.65
CALCOCO1-220ENST00000552282 GLT1D1Q96MS3 346 aa19.12■□□□□ 0.65
CALCOCO1-220ENST00000552282 IL17RBQ9NRM6 502 aa19.12■□□□□ 0.65
CALCOCO1-220ENST00000552282 PQBP1O60828 265 aaKnown RBP19.11■□□□□ 0.65
CALCOCO1-220ENST00000552282 EPHB4P54760 987 aa19.11■□□□□ 0.65
CALCOCO1-220ENST00000552282 FPGSQ05932 587 aa19.11■□□□□ 0.65
CALCOCO1-220ENST00000552282 RCSD1Q6JBY9 416 aa19.11■□□□□ 0.65
CALCOCO1-220ENST00000552282 CCDC144CPQ8IYA2 1237 aa19.11■□□□□ 0.65
CALCOCO1-220ENST00000552282 MORC4Q8TE76 937 aa19.11■□□□□ 0.65
CALCOCO1-220ENST00000552282 EVI5LQ96CN4 794 aa19.11■□□□□ 0.65
CALCOCO1-220ENST00000552282 SEMA6BQ9H3T3 888 aa19.11■□□□□ 0.65
CALCOCO1-220ENST00000552282 SPC25Q9HBM1 224 aa19.11■□□□□ 0.65
CALCOCO1-220ENST00000552282 RNF146Q9NTX7 359 aa19.11■□□□□ 0.65
CALCOCO1-220ENST00000552282 TMEM39AQ9NV64 488 aa19.11■□□□□ 0.65
CALCOCO1-220ENST00000552282 CHD9Q3L8U1 2897 aa19.11■□□□□ 0.65
CALCOCO1-220ENST00000552282 ASTN1O14525 1302 aa19.1■□□□□ 0.65
CALCOCO1-220ENST00000552282 LOC102724159A0A0B4J2E5 919 aa19.1■□□□□ 0.65
CALCOCO1-220ENST00000552282 ASB14A6NK59 587 aa19.1■□□□□ 0.65
CALCOCO1-220ENST00000552282 TIMP1P01033 207 aa19.1■□□□□ 0.65
CALCOCO1-220ENST00000552282 ASGR1P07306 291 aa19.1■□□□□ 0.65
CALCOCO1-220ENST00000552282 RRP1P56182 461 aaKnown RBP19.1■□□□□ 0.65
CALCOCO1-220ENST00000552282 HDAC1Q13547 482 aaPredicted RBP19.1■□□□□ 0.65
CALCOCO1-220ENST00000552282 PWP2Q15269 919 aaKnown RBP19.1■□□□□ 0.65
CALCOCO1-220ENST00000552282 BTNL9Q6UXG8 535 aa19.1■□□□□ 0.65
CALCOCO1-220ENST00000552282 SLC43A3Q8NBI5 491 aa19.1■□□□□ 0.65
CALCOCO1-220ENST00000552282 SEZ6LQ9BYH1 1024 aa19.1■□□□□ 0.65
CALCOCO1-220ENST00000552282 TTYH1Q9H313 450 aaPredicted RBP19.1■□□□□ 0.65
CALCOCO1-220ENST00000552282 HELLSQ9NRZ9 838 aa19.1■□□□□ 0.65
CALCOCO1-220ENST00000552282 GNEQ9Y223 722 aaKnown RBP19.1■□□□□ 0.65
CALCOCO1-220ENST00000552282 A0A0U1RQG5 324 aaPredicted RBP19.09■□□□□ 0.65
CALCOCO1-220ENST00000552282 SOWAHBA6NEL2 793 aa19.09■□□□□ 0.65
CALCOCO1-220ENST00000552282 TSPY2A6NKD2 308 aa19.09■□□□□ 0.65
CALCOCO1-220ENST00000552282 C6orf222P0C671 652 aaPredicted RBP19.09■□□□□ 0.65
CALCOCO1-220ENST00000552282 CNTN2Q02246 1040 aa19.09■□□□□ 0.65
CALCOCO1-220ENST00000552282 RASIP1Q5U651 963 aa19.09■□□□□ 0.65
CALCOCO1-220ENST00000552282 MFSD5Q6N075 450 aa19.09■□□□□ 0.65
CALCOCO1-220ENST00000552282 FAM126BQ8IXS8 530 aa19.09■□□□□ 0.65
CALCOCO1-220ENST00000552282 DCAF4Q8WV16 495 aa19.09■□□□□ 0.65
CALCOCO1-220ENST00000552282 RNPC3Q96LT9 517 aaKnown RBP19.09■□□□□ 0.65
CALCOCO1-220ENST00000552282 CDX2Q99626 313 aaPredicted RBP19.09■□□□□ 0.65
CALCOCO1-220ENST00000552282 TCP11L1Q9NUJ3 509 aa19.09■□□□□ 0.65
CALCOCO1-220ENST00000552282 STX8Q9UNK0 236 aa19.09■□□□□ 0.65
CALCOCO1-220ENST00000552282 ARVCFO00192 962 aa19.08■□□□□ 0.64
CALCOCO1-220ENST00000552282 MCCP23508 829 aa19.08■□□□□ 0.64
CALCOCO1-220ENST00000552282 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.08■□□□□ 0.64
CALCOCO1-220ENST00000552282 AGBL1Q96MI9 1066 aa19.08■□□□□ 0.64
CALCOCO1-220ENST00000552282 RANBP17Q9H2T7 1088 aaKnown RBP19.08■□□□□ 0.64
CALCOCO1-220ENST00000552282 CYP39A1Q9NYL5 469 aa19.08■□□□□ 0.64
CALCOCO1-220ENST00000552282 PRR12Q9ULL5 1215 aa19.08■□□□□ 0.64
CALCOCO1-220ENST00000552282 Q9Y3F1 56 aa19.08■□□□□ 0.64
CALCOCO1-220ENST00000552282 CABYRO75952 493 aa19.07■□□□□ 0.64
CALCOCO1-220ENST00000552282 CD4P01730 458 aa19.07■□□□□ 0.64
CALCOCO1-220ENST00000552282 ICAM1P05362 532 aa19.07■□□□□ 0.64
CALCOCO1-220ENST00000552282 PCP11498 1178 aaKnown RBP19.07■□□□□ 0.64
CALCOCO1-220ENST00000552282 NT5C2P49902 561 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms