RNA–Protein interactions for RNA: ENST00000552240.6

PRICKLE1-209, Transcript of prickle planar cell polarity protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRICKLE1, Length 3,311 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1-209ENST00000552240 PCDHA4Q9UN74 947 aa13.78□□□□□ -0.2
PRICKLE1-209ENST00000552240 USP17L15C9J2P7 530 aa13.78□□□□□ -0.2
PRICKLE1-209ENST00000552240 USP17L13C9JLJ4 530 aa13.78□□□□□ -0.2
PRICKLE1-209ENST00000552240 USP17L11C9JVI0 530 aa13.78□□□□□ -0.2
PRICKLE1-209ENST00000552240 USP17L18D6R9N7 530 aa13.78□□□□□ -0.2
PRICKLE1-209ENST00000552240 USP17L22D6RA61 530 aa13.78□□□□□ -0.2
PRICKLE1-209ENST00000552240 USP17L17D6RBQ6 530 aa13.78□□□□□ -0.2
PRICKLE1-209ENST00000552240 USP17L19D6RCP7 530 aa13.78□□□□□ -0.2
PRICKLE1-209ENST00000552240 USP17L20D6RJB6 530 aa13.78□□□□□ -0.2
PRICKLE1-209ENST00000552240 CALM1P0DP23 149 aa13.78□□□□□ -0.2
PRICKLE1-209ENST00000552240 CALM2P0DP24 149 aa13.78□□□□□ -0.2
PRICKLE1-209ENST00000552240 CALM3P0DP25 149 aa13.78□□□□□ -0.2
PRICKLE1-209ENST00000552240 DMTNQ08495 405 aa13.78□□□□□ -0.2
PRICKLE1-209ENST00000552240 PDE4DQ08499 809 aa13.78□□□□□ -0.2
PRICKLE1-209ENST00000552240 USP17L24Q0WX57 530 aa13.78□□□□□ -0.2
PRICKLE1-209ENST00000552240 SOGA3Q5TF21 947 aa13.78□□□□□ -0.2
PRICKLE1-209ENST00000552240 USP17L6PQ6QN14 398 aa13.78□□□□□ -0.2
PRICKLE1-209ENST00000552240 RTFDC1Q9BY42 306 aaPredicted RBP13.78□□□□□ -0.2
PRICKLE1-209ENST00000552240 DUSP10Q9Y6W6 482 aa13.78□□□□□ -0.2
PRICKLE1-209ENST00000552240 BCL9LQ86UU0 1499 aa13.78□□□□□ -0.2
PRICKLE1-209ENST00000552240 FLT1P17948 1338 aa13.77□□□□□ -0.2
PRICKLE1-209ENST00000552240 ARHGAP6O43182 974 aa13.77□□□□□ -0.2
PRICKLE1-209ENST00000552240 TXLNAP40222 546 aa13.77□□□□□ -0.2
PRICKLE1-209ENST00000552240 ARID5AQ03989 594 aa13.77□□□□□ -0.2
PRICKLE1-209ENST00000552240 ZYXQ15942 572 aaKnown RBP13.77□□□□□ -0.2
PRICKLE1-209ENST00000552240 USH1GQ495M9 461 aa13.77□□□□□ -0.2
PRICKLE1-209ENST00000552240 FILIP1LQ4L180 1135 aa13.77□□□□□ -0.2
PRICKLE1-209ENST00000552240 AGPAT5Q9NUQ2 364 aa13.77□□□□□ -0.2
PRICKLE1-209ENST00000552240 ADD3Q9UEY8 706 aaKnown RBP13.77□□□□□ -0.2
PRICKLE1-209ENST00000552240 SEC63Q9UGP8 760 aaKnown RBP13.77□□□□□ -0.2
PRICKLE1-209ENST00000552240 DACH1Q9UI36 760 aa13.77□□□□□ -0.2
PRICKLE1-209ENST00000552240 PARP3Q9Y6F1 533 aa13.77□□□□□ -0.2
PRICKLE1-209ENST00000552240 PHACTR2O75167 634 aa13.77□□□□□ -0.21
PRICKLE1-209ENST00000552240 GDF11O95390 407 aa13.77□□□□□ -0.21
PRICKLE1-209ENST00000552240 SLC10A5Q5PT55 438 aa13.77□□□□□ -0.21
PRICKLE1-209ENST00000552240 PDXDC2PQ6P474 469 aa13.77□□□□□ -0.21
PRICKLE1-209ENST00000552240 TBC1D16Q8TBP0 767 aa13.77□□□□□ -0.21
PRICKLE1-209ENST00000552240 ERO1AQ96HE7 468 aa13.77□□□□□ -0.21
PRICKLE1-209ENST00000552240 COL16A1Q07092 1604 aaPredicted RBP13.77□□□□□ -0.21
PRICKLE1-209ENST00000552240 ORC4O43929 436 aa13.77□□□□□ -0.21
PRICKLE1-209ENST00000552240 ERVK-24P63145 666 aa13.77□□□□□ -0.21
PRICKLE1-209ENST00000552240 MCM6Q14566 821 aa13.77□□□□□ -0.21
PRICKLE1-209ENST00000552240 SPTY2D1Q68D10 685 aaPredicted RBP13.77□□□□□ -0.21
PRICKLE1-209ENST00000552240 NCAPH2Q6IBW4 605 aa13.77□□□□□ -0.21
PRICKLE1-209ENST00000552240 APTXQ7Z2E3 356 aaKnown RBP13.77□□□□□ -0.21
PRICKLE1-209ENST00000552240 FERMT2Q96AC1 680 aa13.77□□□□□ -0.21
PRICKLE1-209ENST00000552240 CRACR2AQ9BSW2 395 aa13.77□□□□□ -0.21
PRICKLE1-209ENST00000552240 FAM207AQ9NSI2 230 aaPredicted RBP13.77□□□□□ -0.21
PRICKLE1-209ENST00000552240 AFF2P51816 1311 aa13.76□□□□□ -0.21
PRICKLE1-209ENST00000552240 STXBP3O00186 592 aa13.76□□□□□ -0.21
PRICKLE1-209ENST00000552240 SLC37A4O43826 429 aa13.76□□□□□ -0.21
PRICKLE1-209ENST00000552240 E2F4Q16254 413 aa13.76□□□□□ -0.21
PRICKLE1-209ENST00000552240 KRT26Q7Z3Y9 468 aa13.76□□□□□ -0.21
PRICKLE1-209ENST00000552240 NELFCDQ8IXH7 590 aa13.76□□□□□ -0.21
PRICKLE1-209ENST00000552240 SLC35F6Q8N357 371 aa13.76□□□□□ -0.21
PRICKLE1-209ENST00000552240 CERS5Q8N5B7 392 aa13.76□□□□□ -0.21
PRICKLE1-209ENST00000552240 SMCR8Q8TEV9 937 aaPredicted RBP13.76□□□□□ -0.21
PRICKLE1-209ENST00000552240 BCAS3Q9H6U6 928 aa13.76□□□□□ -0.21
PRICKLE1-209ENST00000552240 DISC1Q9NRI5 854 aa13.76□□□□□ -0.21
PRICKLE1-209ENST00000552240 MACROD2A1Z1Q3 448 aa13.76□□□□□ -0.21
PRICKLE1-209ENST00000552240 COPB1P53618 953 aaKnown RBP13.76□□□□□ -0.21
PRICKLE1-209ENST00000552240 UBXN2AP68543 259 aa13.76□□□□□ -0.21
PRICKLE1-209ENST00000552240 VPS72Q15906 364 aa13.76□□□□□ -0.21
PRICKLE1-209ENST00000552240 CABP7Q86V35 215 aa13.76□□□□□ -0.21
PRICKLE1-209ENST00000552240 TICAM2Q86XR7 235 aa13.76□□□□□ -0.21
PRICKLE1-209ENST00000552240 GJD4Q96KN9 370 aaPredicted RBP13.76□□□□□ -0.21
PRICKLE1-209ENST00000552240 USP40Q9NVE5 1235 aa13.76□□□□□ -0.21
PRICKLE1-209ENST00000552240 MYH15Q9Y2K3 1946 aa13.76□□□□□ -0.21
PRICKLE1-209ENST00000552240 TTC26A0AVF1 554 aa13.75□□□□□ -0.21
PRICKLE1-209ENST00000552240 PLEKP08567 350 aaPredicted RBP13.75□□□□□ -0.21
PRICKLE1-209ENST00000552240 PPP2R3AQ06190 1150 aa13.75□□□□□ -0.21
PRICKLE1-209ENST00000552240 KANK3Q6NY19 840 aa13.75□□□□□ -0.21
PRICKLE1-209ENST00000552240 CCDC84Q86UT8 332 aaPredicted RBP13.75□□□□□ -0.21
PRICKLE1-209ENST00000552240 ZC3H12CQ9C0D7 883 aaKnown RBP13.75□□□□□ -0.21
PRICKLE1-209ENST00000552240 CGNQ9P2M7 1197 aaKnown RBP13.75□□□□□ -0.21
PRICKLE1-209ENST00000552240 DAGLAQ9Y4D2 1042 aa13.75□□□□□ -0.21
PRICKLE1-209ENST00000552240 NPHP3-ACAD11A0A0J9YXS1 232 aa13.75□□□□□ -0.21
PRICKLE1-209ENST00000552240 A0A1B0GTH6 734 aa13.75□□□□□ -0.21
PRICKLE1-209ENST00000552240 FAM237AA0A1B0GTK4 181 aa13.75□□□□□ -0.21
PRICKLE1-209ENST00000552240 PSDA5PKW4 1024 aaPredicted RBP13.75□□□□□ -0.21
PRICKLE1-209ENST00000552240 ZSCAN12O43309 604 aa13.75□□□□□ -0.21
PRICKLE1-209ENST00000552240 PLCD3Q8N3E9 789 aa13.75□□□□□ -0.21
PRICKLE1-209ENST00000552240 CSGALNACT2Q8N6G5 542 aa13.75□□□□□ -0.21
PRICKLE1-209ENST00000552240 TANGO6Q9C0B7 1094 aa13.75□□□□□ -0.21
PRICKLE1-209ENST00000552240 TRIM21P19474 475 aaKnown RBP13.75□□□□□ -0.21
PRICKLE1-209ENST00000552240 MATR3P43243 847 aaKnown RBP eCLIP13.75□□□□□ -0.21
PRICKLE1-209ENST00000552240 MTIF2P46199 727 aaKnown RBP13.75□□□□□ -0.21
PRICKLE1-209ENST00000552240 ZNF579Q8NAF0 562 aaKnown RBP13.75□□□□□ -0.21
PRICKLE1-209ENST00000552240 ZNF397Q8NF99 534 aaPredicted RBP13.75□□□□□ -0.21
PRICKLE1-209ENST00000552240 MKRN1Q9UHC7 482 aaKnown RBP13.75□□□□□ -0.21
PRICKLE1-209ENST00000552240 CNTNAP4Q9C0A0 1308 aa13.74□□□□□ -0.21
PRICKLE1-209ENST00000552240 USP17L10C9JJH3 530 aa13.74□□□□□ -0.21
PRICKLE1-209ENST00000552240 CCDC175P0C221 793 aa13.74□□□□□ -0.21
PRICKLE1-209ENST00000552240 STAT3P40763 770 aa13.74□□□□□ -0.21
PRICKLE1-209ENST00000552240 ST5P78524 1137 aa13.74□□□□□ -0.21
PRICKLE1-209ENST00000552240 KCNK18Q7Z418 384 aa13.74□□□□□ -0.21
PRICKLE1-209ENST00000552240 GSDMAQ96QA5 445 aa13.74□□□□□ -0.21
PRICKLE1-209ENST00000552240 BCS1LQ9Y276 419 aa13.74□□□□□ -0.21
PRICKLE1-209ENST00000552240 MEIS1O00470 390 aa13.74□□□□□ -0.21
PRICKLE1-209ENST00000552240 HSPA1LP34931 641 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms