RNA–Protein interactions for RNA: ENST00000551912.1

DDX54-209, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-209ENST00000551912 SLC4A3P48751 1232 aa21.72■■□□□ 1.07
DDX54-209ENST00000551912 GNAQP50148 359 aa21.72■■□□□ 1.07
DDX54-209ENST00000551912 APOBRQ0VD83 1088 aa21.72■■□□□ 1.07
DDX54-209ENST00000551912 RAB11FIP4Q86YS3 637 aa21.72■■□□□ 1.07
DDX54-209ENST00000551912 CCDC144CPQ8IYA2 1237 aa21.72■■□□□ 1.07
DDX54-209ENST00000551912 FANCBQ8NB91 859 aa21.72■■□□□ 1.07
DDX54-209ENST00000551912 BACH2Q9BYV9 841 aa21.72■■□□□ 1.07
DDX54-209ENST00000551912 NAP1L2Q9ULW6 460 aaPredicted RBP21.72■■□□□ 1.07
DDX54-209ENST00000551912 ZNF536O15090 1300 aa21.72■■□□□ 1.07
DDX54-209ENST00000551912 ICAM1P05362 532 aa21.71■■□□□ 1.07
DDX54-209ENST00000551912 RBM25P49756 843 aaKnown RBP21.71■■□□□ 1.07
DDX54-209ENST00000551912 RCAN1P53805 252 aa21.71■■□□□ 1.07
DDX54-209ENST00000551912 PRKCZQ05513 592 aa21.71■■□□□ 1.07
DDX54-209ENST00000551912 TOB2Q14106 344 aaPredicted RBP21.71■■□□□ 1.07
DDX54-209ENST00000551912 SOCS4Q8WXH5 440 aa21.71■■□□□ 1.07
DDX54-209ENST00000551912 AGBL1Q96MI9 1066 aa21.71■■□□□ 1.07
DDX54-209ENST00000551912 LZTS2Q9BRK4 669 aa21.71■■□□□ 1.07
DDX54-209ENST00000551912 JMJD4Q9H9V9 463 aa21.71■■□□□ 1.07
DDX54-209ENST00000551912 VAT1LQ9HCJ6 419 aa21.71■■□□□ 1.07
DDX54-209ENST00000551912 PNMA2Q9UL42 364 aa21.71■■□□□ 1.07
DDX54-209ENST00000551912 PTPN22Q9Y2R2 807 aa21.71■■□□□ 1.07
DDX54-209ENST00000551912 RIPK3Q9Y572 518 aa21.71■■□□□ 1.07
DDX54-209ENST00000551912 DOCK3Q8IZD9 2030 aa21.7■■□□□ 1.06
DDX54-209ENST00000551912 PTPREP23469 700 aa21.7■■□□□ 1.06
DDX54-209ENST00000551912 CDC37Q16543 378 aaPredicted RBP21.7■■□□□ 1.06
DDX54-209ENST00000551912 FBXO46Q6PJ61 603 aaPredicted RBP21.7■■□□□ 1.06
DDX54-209ENST00000551912 NUDT12Q9BQG2 462 aa21.7■■□□□ 1.06
DDX54-209ENST00000551912 CCPG1Q9ULG6 757 aa21.7■■□□□ 1.06
DDX54-209ENST00000551912 GABRQQ9UN88 632 aa21.7■■□□□ 1.06
DDX54-209ENST00000551912 SLC15A5A6NIM6 579 aa21.69■■□□□ 1.06
DDX54-209ENST00000551912 GOLGA8AA7E2F4 631 aa21.69■■□□□ 1.06
DDX54-209ENST00000551912 GOLGA8BA8MQT2 603 aa21.69■■□□□ 1.06
DDX54-209ENST00000551912 STRNO43815 780 aa21.69■■□□□ 1.06
DDX54-209ENST00000551912 FLT3LGP49771 235 aa21.69■■□□□ 1.06
DDX54-209ENST00000551912 RTN1Q16799 776 aa21.69■■□□□ 1.06
DDX54-209ENST00000551912 TKFCQ3LXA3 575 aa21.69■■□□□ 1.06
DDX54-209ENST00000551912 NBPF11Q86T75 865 aa21.69■■□□□ 1.06
DDX54-209ENST00000551912 CHST13Q8NET6 341 aa21.69■■□□□ 1.06
DDX54-209ENST00000551912 MCOLN1Q9GZU1 580 aa21.69■■□□□ 1.06
DDX54-209ENST00000551912 RIOX1Q9H6W3 641 aa21.69■■□□□ 1.06
DDX54-209ENST00000551912 HOMER2Q9NSB8 354 aa21.69■■□□□ 1.06
DDX54-209ENST00000551912 RBM28Q9NW13 759 aaKnown RBP21.69■■□□□ 1.06
DDX54-209ENST00000551912 GJD2Q9UKL4 321 aa21.69■■□□□ 1.06
DDX54-209ENST00000551912 HTTP42858 3142 aa21.69■■□□□ 1.06
DDX54-209ENST00000551912 FCER1AP12319 257 aa21.68■■□□□ 1.06
DDX54-209ENST00000551912 ALAS1P13196 640 aa21.68■■□□□ 1.06
DDX54-209ENST00000551912 SMARCA1P28370 1054 aa21.68■■□□□ 1.06
DDX54-209ENST00000551912 METAP2P50579 478 aaKnown RBP eCLIP21.68■■□□□ 1.065e-7■■■□□ 16.5
DDX54-209ENST00000551912 NEK4P51957 841 aa21.68■■□□□ 1.06
DDX54-209ENST00000551912 EVCP57679 992 aa21.68■■□□□ 1.06
DDX54-209ENST00000551912 GRB14Q14449 540 aa21.68■■□□□ 1.06
DDX54-209ENST00000551912 MORN1Q5T089 497 aa21.68■■□□□ 1.06
DDX54-209ENST00000551912 ABRAQ8N0Z2 381 aa21.68■■□□□ 1.06
DDX54-209ENST00000551912 RAET1EQ8TD07 263 aa21.68■■□□□ 1.06
DDX54-209ENST00000551912 MTMR8Q96EF0 704 aa21.68■■□□□ 1.06
DDX54-209ENST00000551912 SPZ1Q9BXG8 430 aa21.68■■□□□ 1.06
DDX54-209ENST00000551912 ALDH8A1Q9H2A2 487 aaPredicted RBP21.68■■□□□ 1.06
DDX54-209ENST00000551912 FBXO40Q9UH90 709 aa21.68■■□□□ 1.06
DDX54-209ENST00000551912 PTCH2Q9Y6C5 1203 aa21.68■■□□□ 1.06
DDX54-209ENST00000551912 CYTH3O43739 400 aa21.67■■□□□ 1.06
DDX54-209ENST00000551912 PLEKHA8P1O95397 391 aa21.67■■□□□ 1.06
DDX54-209ENST00000551912 PPP2R5BQ15173 497 aa21.67■■□□□ 1.06
DDX54-209ENST00000551912 SLC35G1Q2M3R5 365 aa21.67■■□□□ 1.06
DDX54-209ENST00000551912 QRICH1Q2TAL8 776 aa21.67■■□□□ 1.06
DDX54-209ENST00000551912 TMTC3Q6ZXV5 915 aa21.67■■□□□ 1.06
DDX54-209ENST00000551912 TRERF1Q96PN7 1200 aa21.67■■□□□ 1.06
DDX54-209ENST00000551912 MMP19Q99542 508 aa21.67■■□□□ 1.06
DDX54-209ENST00000551912 ACAD9Q9H845 621 aa21.67■■□□□ 1.06
DDX54-209ENST00000551912 RNF146Q9NTX7 359 aa21.67■■□□□ 1.06
DDX54-209ENST00000551912 ZBTB5O15062 677 aa21.66■■□□□ 1.06
DDX54-209ENST00000551912 ADORA2AP29274 412 aa21.66■■□□□ 1.06
DDX54-209ENST00000551912 IRF5Q13568 498 aa21.66■■□□□ 1.06
DDX54-209ENST00000551912 KCTD2Q14681 263 aa21.66■■□□□ 1.06
DDX54-209ENST00000551912 ANKRD1Q15327 319 aa21.66■■□□□ 1.06
DDX54-209ENST00000551912 HOMER1Q86YM7 354 aa21.66■■□□□ 1.06
DDX54-209ENST00000551912 SRBD1Q8N5C6 995 aaKnown RBP21.66■■□□□ 1.06
DDX54-209ENST00000551912 USP6NLQ92738 828 aa21.66■■□□□ 1.06
DDX54-209ENST00000551912 KIF2CQ99661 725 aa21.66■■□□□ 1.06
DDX54-209ENST00000551912 HPS5Q9UPZ3 1129 aa21.66■■□□□ 1.06
DDX54-209ENST00000551912 BAZ2BQ9UIF8 2168 aaKnown RBP21.65■■□□□ 1.06
DDX54-209ENST00000551912 PLXNB2O15031 1838 aa21.65■■□□□ 1.06
DDX54-209ENST00000551912 CCDC196A0A1B0GTZ2 297 aa21.65■■□□□ 1.06
DDX54-209ENST00000551912 TAL1P17542 331 aaPredicted RBP21.65■■□□□ 1.06
DDX54-209ENST00000551912 CYP2B6P20813 491 aa21.65■■□□□ 1.06
DDX54-209ENST00000551912 PDIA3P30101 505 aaKnown RBP21.65■■□□□ 1.06
DDX54-209ENST00000551912 RGS2P41220 211 aa21.65■■□□□ 1.06
DDX54-209ENST00000551912 MAP2K5Q13163 448 aa21.65■■□□□ 1.06
DDX54-209ENST00000551912 USH1GQ495M9 461 aa21.65■■□□□ 1.06
DDX54-209ENST00000551912 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.65■■□□□ 1.06
DDX54-209ENST00000551912 FBXO11Q86XK2 927 aa21.65■■□□□ 1.06
DDX54-209ENST00000551912 CMTR1Q8N1G2 835 aaKnown RBP21.65■■□□□ 1.06
DDX54-209ENST00000551912 RRP36Q96EU6 259 aaKnown RBP21.65■■□□□ 1.06
DDX54-209ENST00000551912 ZNF274Q96GC6 653 aaPredicted RBP21.65■■□□□ 1.06
DDX54-209ENST00000551912 TBC1D32Q96NH3 1257 aa21.65■■□□□ 1.06
DDX54-209ENST00000551912 PIGSQ96S52 555 aa21.65■■□□□ 1.06
DDX54-209ENST00000551912 LARP6Q9BRS8 491 aaKnown RBP21.65■■□□□ 1.06
DDX54-209ENST00000551912 NID2Q14112 1375 aa21.64■■□□□ 1.06
DDX54-209ENST00000551912 PNMA6FA0A0J9YX94 578 aa21.64■■□□□ 1.05
DDX54-209ENST00000551912 XRCC5P13010 732 aaKnown RBP21.64■■□□□ 1.05
DDX54-209ENST00000551912 CDC27P30260 824 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms