RNA–Protein interactions for RNA: ENST00000551425.1

PTCH1-222, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 241 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-222ENST00000551425 TRPV6Q9H1D0 765 aa14.43□□□□□ -0.1
PTCH1-222ENST00000551425 GOPCQ9HD26 462 aa14.43□□□□□ -0.1
PTCH1-222ENST00000551425 RIPK3Q9Y572 518 aa14.43□□□□□ -0.1
PTCH1-222ENST00000551425 GRIN2DO15399 1336 aa14.42□□□□□ -0.1
PTCH1-222ENST00000551425 NAV1Q8NEY1 1877 aa14.42□□□□□ -0.1
PTCH1-222ENST00000551425 ATP2A1O14983 1001 aa14.42□□□□□ -0.1
PTCH1-222ENST00000551425 B4GALT4O60513 344 aa14.42□□□□□ -0.1
PTCH1-222ENST00000551425 BEX3Q00994 111 aa14.42□□□□□ -0.1
PTCH1-222ENST00000551425 TTLL4Q14679 1199 aa14.42□□□□□ -0.1
PTCH1-222ENST00000551425 FAM83BQ5T0W9 1011 aa14.42□□□□□ -0.1
PTCH1-222ENST00000551425 ARMCX2Q7L311 632 aa14.42□□□□□ -0.1
PTCH1-222ENST00000551425 SSH3Q8TE77 659 aa14.42□□□□□ -0.1
PTCH1-222ENST00000551425 EAF2Q96CJ1 260 aaPredicted RBP14.42□□□□□ -0.1
PTCH1-222ENST00000551425 CCDC8Q9H0W5 538 aaPredicted RBP14.42□□□□□ -0.1
PTCH1-222ENST00000551425 KANSL2Q9H9L4 492 aa14.42□□□□□ -0.1
PTCH1-222ENST00000551425 CERS4Q9HA82 394 aa14.42□□□□□ -0.1
PTCH1-222ENST00000551425 ASTN1O14525 1302 aa14.41□□□□□ -0.1
PTCH1-222ENST00000551425 SURF6O75683 361 aaKnown RBP14.41□□□□□ -0.1
PTCH1-222ENST00000551425 RARSP54136 660 aaKnown RBP14.41□□□□□ -0.1
PTCH1-222ENST00000551425 TAP1Q03518 808 aa14.41□□□□□ -0.1
PTCH1-222ENST00000551425 PHOSPHO2Q8TCD6 241 aa14.41□□□□□ -0.1
PTCH1-222ENST00000551425 SDR42E1Q8WUS8 393 aa14.41□□□□□ -0.1
PTCH1-222ENST00000551425 ARNTL2Q8WYA1 636 aa14.41□□□□□ -0.1
PTCH1-222ENST00000551425 SCLYQ96I15 445 aa14.41□□□□□ -0.1
PTCH1-222ENST00000551425 SLF1Q9BQI6 1058 aa14.41□□□□□ -0.1
PTCH1-222ENST00000551425 NOP58Q9Y2X3 529 aaKnown RBP14.41□□□□□ -0.1
PTCH1-222ENST00000551425 PDE6AP16499 860 aa14.4□□□□□ -0.1
PTCH1-222ENST00000551425 NHLH1Q02575 133 aa14.4□□□□□ -0.1
PTCH1-222ENST00000551425 TNFAIP2Q03169 654 aa14.4□□□□□ -0.1
PTCH1-222ENST00000551425 GRB10Q13322 594 aa14.4□□□□□ -0.1
PTCH1-222ENST00000551425 CCDC144CPQ8IYA2 1237 aa14.4□□□□□ -0.1
PTCH1-222ENST00000551425 SLC9A7Q96T83 725 aa14.4□□□□□ -0.1
PTCH1-222ENST00000551425 KCNH6Q9H252 994 aa14.4□□□□□ -0.1
PTCH1-222ENST00000551425 GNEQ9Y223 722 aaKnown RBP14.4□□□□□ -0.1
PTCH1-222ENST00000551425 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.39□□□□□ -0.11
PTCH1-222ENST00000551425 LPXNO60711 386 aa14.39□□□□□ -0.11
PTCH1-222ENST00000551425 ARHGEF15O94989 841 aa14.39□□□□□ -0.11
PTCH1-222ENST00000551425 CDK8P49336 464 aa14.39□□□□□ -0.11
PTCH1-222ENST00000551425 ATP8B2P98198 1209 aa14.39□□□□□ -0.11
PTCH1-222ENST00000551425 TTF1Q15361 905 aaPredicted RBP14.39□□□□□ -0.11
PTCH1-222ENST00000551425 FSCN1Q16658 493 aaKnown RBP14.39□□□□□ -0.11
PTCH1-222ENST00000551425 SLC9C2Q5TAH2 1124 aa14.39□□□□□ -0.11
PTCH1-222ENST00000551425 TLK2Q86UE8 772 aa14.39□□□□□ -0.11
PTCH1-222ENST00000551425 ANKRD35Q8N283 1001 aa14.39□□□□□ -0.11
PTCH1-222ENST00000551425 LCORLQ8N3X6 602 aa14.39□□□□□ -0.11
PTCH1-222ENST00000551425 PRPF38AQ8NAV1 312 aaKnown RBP14.39□□□□□ -0.11
PTCH1-222ENST00000551425 LMCD1Q9NZU5 365 aa14.39□□□□□ -0.11
PTCH1-222ENST00000551425 FBXO40Q9UH90 709 aa14.39□□□□□ -0.11
PTCH1-222ENST00000551425 TCRBV5S4A2TA0A5A2 114 aa14.38□□□□□ -0.11
PTCH1-222ENST00000551425 ZEB2O60315 1214 aa14.38□□□□□ -0.11
PTCH1-222ENST00000551425 ACTN1P12814 892 aa14.38□□□□□ -0.11
PTCH1-222ENST00000551425 TRIM27P14373 513 aa14.38□□□□□ -0.11
PTCH1-222ENST00000551425 C12orf60Q5U649 245 aa14.38□□□□□ -0.11
PTCH1-222ENST00000551425 C16orf86Q6ZW13 317 aa14.38□□□□□ -0.11
PTCH1-222ENST00000551425 NOL8Q76FK4 1167 aaKnown RBP14.38□□□□□ -0.11
PTCH1-222ENST00000551425 FAM178BQ8IXR5 827 aa14.38□□□□□ -0.11
PTCH1-222ENST00000551425 GJD3Q8N144 294 aa14.38□□□□□ -0.11
PTCH1-222ENST00000551425 CHST13Q8NET6 341 aa14.38□□□□□ -0.11
PTCH1-222ENST00000551425 ALDH8A1Q9H2A2 487 aaPredicted RBP14.38□□□□□ -0.11
PTCH1-222ENST00000551425 ATP8A2Q9NTI2 1148 aa14.38□□□□□ -0.11
PTCH1-222ENST00000551425 ZNF532Q9HCE3 1301 aa14.38□□□□□ -0.11
PTCH1-222ENST00000551425 KIF28PB7ZC32 967 aa14.37□□□□□ -0.11
PTCH1-222ENST00000551425 IPO8O15397 1037 aaKnown RBP14.37□□□□□ -0.11
PTCH1-222ENST00000551425 RAD21O60216 631 aa14.37□□□□□ -0.11
PTCH1-222ENST00000551425 ZBED4O75132 1171 aa14.37□□□□□ -0.11
PTCH1-222ENST00000551425 SUPT20HL2P0C7V6 817 aa14.37□□□□□ -0.11
PTCH1-222ENST00000551425 ALADP13716 330 aa14.37□□□□□ -0.11
PTCH1-222ENST00000551425 RFC2P35250 354 aa14.37□□□□□ -0.11
PTCH1-222ENST00000551425 HERC6Q8IVU3 1022 aa14.37□□□□□ -0.11
PTCH1-222ENST00000551425 CPXCR1Q8N123 301 aa14.37□□□□□ -0.11
PTCH1-222ENST00000551425 NUP88Q99567 741 aaPredicted RBP14.37□□□□□ -0.11
PTCH1-222ENST00000551425 AP5M1Q9H0R1 490 aa14.37□□□□□ -0.11
PTCH1-222ENST00000551425 Q9Y3F1 56 aa14.37□□□□□ -0.11
PTCH1-222ENST00000551425 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.36□□□□□ -0.11
PTCH1-222ENST00000551425 BCAR3O75815 825 aa14.36□□□□□ -0.11
PTCH1-222ENST00000551425 OAZ1P54368 228 aa14.36□□□□□ -0.11
PTCH1-222ENST00000551425 PSMC6P62333 389 aa14.36□□□□□ -0.11
PTCH1-222ENST00000551425 DEFB128Q7Z7B8 93 aa14.36□□□□□ -0.11
PTCH1-222ENST00000551425 FAM133AQ8N9E0 248 aa14.36□□□□□ -0.11
PTCH1-222ENST00000551425 UIMC1Q96RL1 719 aa14.36□□□□□ -0.11
PTCH1-222ENST00000551425 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.36□□□□□ -0.11
PTCH1-222ENST00000551425 SLC38A10Q9HBR0 1119 aa14.36□□□□□ -0.11
PTCH1-222ENST00000551425 CYP2D7A0A087X1C5 515 aa14.35□□□□□ -0.11
PTCH1-222ENST00000551425 F5H6K3 240 aa14.35□□□□□ -0.11
PTCH1-222ENST00000551425 DYNC1LI2O43237 492 aaPredicted RBP14.35□□□□□ -0.11
PTCH1-222ENST00000551425 PRKAB2O43741 272 aa14.35□□□□□ -0.11
PTCH1-222ENST00000551425 CYP2C9P11712 490 aa14.35□□□□□ -0.11
PTCH1-222ENST00000551425 SMPD1P17405 629 aa14.35□□□□□ -0.11
PTCH1-222ENST00000551425 SLC4A3P48751 1232 aa14.35□□□□□ -0.11
PTCH1-222ENST00000551425 CNTN2Q02246 1040 aa14.35□□□□□ -0.11
PTCH1-222ENST00000551425 KLRC3Q07444 240 aa14.35□□□□□ -0.11
PTCH1-222ENST00000551425 LEXMQ3ZCV2 418 aa14.35□□□□□ -0.11
PTCH1-222ENST00000551425 AMOTL1Q8IY63 956 aa14.35□□□□□ -0.11
PTCH1-222ENST00000551425 FBXL18Q96ME1 805 aa14.35□□□□□ -0.11
PTCH1-222ENST00000551425 UBE2ZQ9H832 354 aaPredicted RBP14.35□□□□□ -0.11
PTCH1-222ENST00000551425 ARMT1Q9H993 441 aa14.35□□□□□ -0.11
PTCH1-222ENST00000551425 RAVER2Q9HCJ3 691 aaKnown RBP14.35□□□□□ -0.11
PTCH1-222ENST00000551425 CTDP1Q9Y5B0 961 aaPredicted RBP14.35□□□□□ -0.11
PTCH1-222ENST00000551425 ASB14A6NK59 587 aa14.34□□□□□ -0.11
PTCH1-222ENST00000551425 USP17L12C9JPN9 530 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms