RNA–Protein interactions for RNA: ENST00000551418.5

PRPF40B-215, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-215ENST00000551418 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.3■■□□□ 1
PRPF40B-215ENST00000551418 ARMCX2Q7L311 632 aa21.3■■□□□ 1
PRPF40B-215ENST00000551418 ANKRD33Q7Z3H0 272 aa21.3■■□□□ 1
PRPF40B-215ENST00000551418 ZNF467Q7Z7K2 595 aaPredicted RBP21.3■■□□□ 1
PRPF40B-215ENST00000551418 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.3■■□□□ 1
PRPF40B-215ENST00000551418 MYLIPQ8WY64 445 aa21.3■■□□□ 1
PRPF40B-215ENST00000551418 FSD1Q9BTV5 496 aa21.3■■□□□ 1
PRPF40B-215ENST00000551418 COL25A1Q9BXS0 654 aaPredicted RBP21.3■■□□□ 1
PRPF40B-215ENST00000551418 KATNBL1Q9H079 304 aa21.3■■□□□ 1
PRPF40B-215ENST00000551418 EYSQ5T1H1 3165 aa21.3■■□□□ 1
PRPF40B-215ENST00000551418 ZNF536O15090 1300 aa21.29■■□□□ 1
PRPF40B-215ENST00000551418 TTC41PQ6P2S7 1318 aa21.29■■□□□ 1
PRPF40B-215ENST00000551418 PLIN4Q96Q06 1357 aa21.29■■□□□ 1
PRPF40B-215ENST00000551418 CTAGE5O15320 804 aa21.29■■□□□ 1
PRPF40B-215ENST00000551418 C6orf222P0C671 652 aaPredicted RBP21.29■■□□□ 1
PRPF40B-215ENST00000551418 MCCP23508 829 aa21.29■■□□□ 1
PRPF40B-215ENST00000551418 SMAD3P84022 425 aaKnown RBP21.29■■□□□ 1
PRPF40B-215ENST00000551418 CCDC144CPQ8IYA2 1237 aa21.29■■□□□ 1
PRPF40B-215ENST00000551418 CHST13Q8NET6 341 aa21.29■■□□□ 1
PRPF40B-215ENST00000551418 RNPC3Q96LT9 517 aaKnown RBP21.29■■□□□ 1
PRPF40B-215ENST00000551418 NAPBQ9H115 298 aa21.29■■□□□ 1
PRPF40B-215ENST00000551418 ZNF287Q9HBT7 754 aa21.29■■□□□ 1
PRPF40B-215ENST00000551418 IL17RBQ9NRM6 502 aa21.29■■□□□ 1
PRPF40B-215ENST00000551418 ISY1Q9ULR0 285 aaKnown RBP21.29■■□□□ 1
PRPF40B-215ENST00000551418 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.28■■□□□ 1
PRPF40B-215ENST00000551418 SOWAHBA6NEL2 793 aa21.28■■□□□ 1
PRPF40B-215ENST00000551418 ASGR1P07306 291 aa21.28■■□□□ 1
PRPF40B-215ENST00000551418 CDK7P50613 346 aa21.28■■□□□ 1
PRPF40B-215ENST00000551418 FPGSQ05932 587 aa21.28■■□□□ 1
PRPF40B-215ENST00000551418 PDE4BQ07343 736 aa21.28■■□□□ 1
PRPF40B-215ENST00000551418 TOX2Q96NM4 488 aa21.28■■□□□ 1
PRPF40B-215ENST00000551418 NACAP1Q9BZK3 213 aa21.28■■□□□ 1
PRPF40B-215ENST00000551418 UPF3AQ9H1J1 476 aaKnown RBP21.28■■□□□ 1
PRPF40B-215ENST00000551418 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.28■■□□□ 1
PRPF40B-215ENST00000551418 MOXD2PA6NHM9 499 aa21.27■■□□□ 1
PRPF40B-215ENST00000551418 DCDC2CA8MYV0 355 aa21.27■■□□□ 1
PRPF40B-215ENST00000551418 OAZ1P54368 228 aa21.27■■□□□ 1
PRPF40B-215ENST00000551418 BEX3Q00994 111 aa21.27■■□□□ 1
PRPF40B-215ENST00000551418 VPS53Q5VIR6 699 aa21.27■■□□□ 1
PRPF40B-215ENST00000551418 KCTD1Q719H9 257 aa21.27■■□□□ 1
PRPF40B-215ENST00000551418 C16orf59Q7L2K0 433 aa21.27■■□□□ 1
PRPF40B-215ENST00000551418 FAM133AQ8N9E0 248 aa21.27■■□□□ 1
PRPF40B-215ENST00000551418 NUP133Q8WUM0 1156 aa21.27■■□□□ 1
PRPF40B-215ENST00000551418 ABHD16BQ9H3Z7 469 aa21.27■■□□□ 1
PRPF40B-215ENST00000551418 A1CFQ9NQ94 594 aaKnown RBP21.27■■□□□ 1
PRPF40B-215ENST00000551418 FBXO40Q9UH90 709 aa21.27■■□□□ 1
PRPF40B-215ENST00000551418 TBX21Q9UL17 535 aa21.27■■□□□ 1
PRPF40B-215ENST00000551418 SYNPO2Q9UMS6 1093 aa21.27■■□□□ 1
PRPF40B-215ENST00000551418 ASTN1O14525 1302 aa21.27■□□□□ 0.99
PRPF40B-215ENST00000551418 ERC2O15083 957 aa21.26■□□□□ 0.99
PRPF40B-215ENST00000551418 CST5P28325 142 aaPredicted RBP21.26■□□□□ 0.99
PRPF40B-215ENST00000551418 GJA9P57773 515 aa21.26■□□□□ 0.99
PRPF40B-215ENST00000551418 GNASQ5JWF2 1037 aa21.26■□□□□ 0.99
PRPF40B-215ENST00000551418 TMEM63BQ5T3F8 832 aa21.26■□□□□ 0.99
PRPF40B-215ENST00000551418 STAG1Q8WVM7 1258 aa21.26■□□□□ 0.99
PRPF40B-215ENST00000551418 GMCL1Q96IK5 515 aa21.26■□□□□ 0.99
PRPF40B-215ENST00000551418 RNF146Q9NTX7 359 aa21.26■□□□□ 0.99
PRPF40B-215ENST00000551418 MTMR7Q9Y216 660 aa21.26■□□□□ 0.99
PRPF40B-215ENST00000551418 SALL3Q9BXA9 1300 aa21.26■□□□□ 0.99
PRPF40B-215ENST00000551418 TIMP1P01033 207 aa21.25■□□□□ 0.99
PRPF40B-215ENST00000551418 MX1P20591 662 aa21.25■□□□□ 0.99
PRPF40B-215ENST00000551418 SLC1A4P43007 532 aa21.25■□□□□ 0.99
PRPF40B-215ENST00000551418 STAT2P52630 851 aa21.25■□□□□ 0.99
PRPF40B-215ENST00000551418 LRRFIP1Q32MZ4 808 aaKnown RBP21.25■□□□□ 0.99
PRPF40B-215ENST00000551418 MUM1L1Q5H9M0 696 aa21.25■□□□□ 0.99
PRPF40B-215ENST00000551418 CCDC174Q6PII3 467 aa21.25■□□□□ 0.99
PRPF40B-215ENST00000551418 MAFAQ8NHW3 353 aaPredicted RBP21.25■□□□□ 0.99
PRPF40B-215ENST00000551418 VTI1AQ96AJ9 217 aa21.25■□□□□ 0.99
PRPF40B-215ENST00000551418 GLT1D1Q96MS3 346 aa21.25■□□□□ 0.99
PRPF40B-215ENST00000551418 PURBQ96QR8 312 aaKnown RBP21.25■□□□□ 0.99
PRPF40B-215ENST00000551418 ACAD9Q9H845 621 aa21.25■□□□□ 0.99
PRPF40B-215ENST00000551418 CDH23Q9H251 3354 aa21.24■□□□□ 0.99
PRPF40B-215ENST00000551418 PRUNE2Q8WUY3 3088 aa21.24■□□□□ 0.99
PRPF40B-215ENST00000551418 LCTP09848 1927 aa21.24■□□□□ 0.99
PRPF40B-215ENST00000551418 ALAS1P13196 640 aa21.24■□□□□ 0.99
PRPF40B-215ENST00000551418 IKQ13123 557 aaPredicted RBP21.24■□□□□ 0.99
PRPF40B-215ENST00000551418 TRERF1Q96PN7 1200 aa21.24■□□□□ 0.99
PRPF40B-215ENST00000551418 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.24■□□□□ 0.99
PRPF40B-215ENST00000551418 PDGFCQ9NRA1 345 aa21.24■□□□□ 0.99
PRPF40B-215ENST00000551418 PRR12Q9ULL5 1215 aa21.24■□□□□ 0.99
PRPF40B-215ENST00000551418 STX8Q9UNK0 236 aa21.24■□□□□ 0.99
PRPF40B-215ENST00000551418 ELP1O95163 1332 aa21.24■□□□□ 0.99
PRPF40B-215ENST00000551418 ARVCFO00192 962 aa21.23■□□□□ 0.99
PRPF40B-215ENST00000551418 SLC3A2P08195 630 aaKnown RBP21.23■□□□□ 0.99
PRPF40B-215ENST00000551418 TTBK2Q6IQ55 1244 aa21.23■□□□□ 0.99
PRPF40B-215ENST00000551418 RCSD1Q6JBY9 416 aa21.23■□□□□ 0.99
PRPF40B-215ENST00000551418 FAM160B2Q86V87 743 aa21.23■□□□□ 0.99
PRPF40B-215ENST00000551418 PCSK9Q8NBP7 692 aaKnown RBP21.23■□□□□ 0.99
PRPF40B-215ENST00000551418 CHURC1Q8WUH1 139 aa21.23■□□□□ 0.99
PRPF40B-215ENST00000551418 TSPY2A6NKD2 308 aa21.22■□□□□ 0.99
PRPF40B-215ENST00000551418 GRXCR1A8MXD5 290 aa21.22■□□□□ 0.99
PRPF40B-215ENST00000551418 CSF2RAP15509 400 aa21.22■□□□□ 0.99
PRPF40B-215ENST00000551418 TNFAIP2Q03169 654 aa21.22■□□□□ 0.99
PRPF40B-215ENST00000551418 GRIN2CQ14957 1233 aa21.22■□□□□ 0.99
PRPF40B-215ENST00000551418 MFSD5Q6N075 450 aa21.22■□□□□ 0.99
PRPF40B-215ENST00000551418 CXCL17Q6UXB2 119 aa21.22■□□□□ 0.99
PRPF40B-215ENST00000551418 FAM126BQ8IXS8 530 aa21.22■□□□□ 0.99
PRPF40B-215ENST00000551418 PPP1R12CQ9BZL4 782 aa21.22■□□□□ 0.99
PRPF40B-215ENST00000551418 LRRC37A2A6NM11 1700 aa21.21■□□□□ 0.99
PRPF40B-215ENST00000551418 A0A0U1RQG5 324 aaPredicted RBP21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms