RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 KIAA1211Q6ZU35 1233 aa22.29■■□□□ 1.16
DDX54-208ENST00000551344 AGBL1Q96MI9 1066 aa22.29■■□□□ 1.16
DDX54-208ENST00000551344 KAT14Q9H8E8 782 aa22.29■■□□□ 1.16
DDX54-208ENST00000551344 GPCPD1Q9NPB8 672 aa22.29■■□□□ 1.16
DDX54-208ENST00000551344 LAMA4Q16363 1823 aa22.29■■□□□ 1.16
DDX54-208ENST00000551344 SEPT4O43236 478 aa22.28■■□□□ 1.16
DDX54-208ENST00000551344 SLC16A2P36021 539 aa22.28■■□□□ 1.16
DDX54-208ENST00000551344 MNX1P50219 401 aaPredicted RBP22.28■■□□□ 1.16
DDX54-208ENST00000551344 GPATCH4Q5T3I0 446 aaKnown RBP22.28■■□□□ 1.16
DDX54-208ENST00000551344 ENAHQ8N8S7 591 aaPredicted RBP22.28■■□□□ 1.16
DDX54-208ENST00000551344 PNMA1Q8ND90 353 aa22.28■■□□□ 1.16
DDX54-208ENST00000551344 UBAC1Q9BSL1 405 aa22.28■■□□□ 1.16
DDX54-208ENST00000551344 RANBP17Q9H2T7 1088 aaKnown RBP22.28■■□□□ 1.16
DDX54-208ENST00000551344 ACAD9Q9H845 621 aa22.28■■□□□ 1.16
DDX54-208ENST00000551344 FRMPD2Q68DX3 1309 aaPredicted RBP22.28■■□□□ 1.16
DDX54-208ENST00000551344 ICAM1P05362 532 aa22.27■■□□□ 1.16
DDX54-208ENST00000551344 NEFLP07196 543 aa22.27■■□□□ 1.16
DDX54-208ENST00000551344 PRAMEF19Q5SWL8 479 aa22.27■■□□□ 1.16
DDX54-208ENST00000551344 CCDC174Q6PII3 467 aa22.27■■□□□ 1.16
DDX54-208ENST00000551344 MAMDC4Q6UXC1 1216 aa22.27■■□□□ 1.16
DDX54-208ENST00000551344 ZNF467Q7Z7K2 595 aaPredicted RBP22.27■■□□□ 1.16
DDX54-208ENST00000551344 DIS3LQ8TF46 1054 aaKnown RBP22.27■■□□□ 1.16
DDX54-208ENST00000551344 TRERF1Q96PN7 1200 aa22.27■■□□□ 1.16
DDX54-208ENST00000551344 HOMER2Q9NSB8 354 aa22.27■■□□□ 1.16
DDX54-208ENST00000551344 PNMA2Q9UL42 364 aa22.27■■□□□ 1.16
DDX54-208ENST00000551344 TNKSO95271 1327 aa22.27■■□□□ 1.16
DDX54-208ENST00000551344 ALAS1P13196 640 aa22.26■■□□□ 1.15
DDX54-208ENST00000551344 SNAP25P60880 206 aa22.26■■□□□ 1.15
DDX54-208ENST00000551344 C11orf49Q9H6J7 331 aa22.26■■□□□ 1.15
DDX54-208ENST00000551344 RNF146Q9NTX7 359 aa22.26■■□□□ 1.15
DDX54-208ENST00000551344 SKAP1Q86WV1 359 aa22.25■■□□□ 1.15
DDX54-208ENST00000551344 ESYT1Q9BSJ8 1104 aa22.25■■□□□ 1.15
DDX54-208ENST00000551344 CCPG1Q9ULG6 757 aa22.25■■□□□ 1.15
DDX54-208ENST00000551344 RBM8AQ9Y5S9 174 aaKnown RBP22.25■■□□□ 1.15
DDX54-208ENST00000551344 NR2E3Q9Y5X4 410 aa22.25■■□□□ 1.15
DDX54-208ENST00000551344 SYNGAP1Q96PV0 1343 aa22.25■■□□□ 1.15
DDX54-208ENST00000551344 E7EWF7 191 aa22.24■■□□□ 1.15
DDX54-208ENST00000551344 IFIT1BQ5T764 474 aaKnown RBP22.24■■□□□ 1.15
DDX54-208ENST00000551344 CYB5R4Q7L1T6 521 aa22.24■■□□□ 1.15
DDX54-208ENST00000551344 RALYLQ86SE5 291 aaKnown RBP22.24■■□□□ 1.15
DDX54-208ENST00000551344 ARRDC4Q8NCT1 418 aa22.24■■□□□ 1.15
DDX54-208ENST00000551344 NCOA7Q8NI08 942 aa22.24■■□□□ 1.15
DDX54-208ENST00000551344 CNPY2Q9Y2B0 182 aa22.24■■□□□ 1.15
DDX54-208ENST00000551344 POTEB2H3BUK9 544 aa22.23■■□□□ 1.15
DDX54-208ENST00000551344 COL6A1P12109 1028 aa22.23■■□□□ 1.15
DDX54-208ENST00000551344 SEC23AQ15436 765 aa22.23■■□□□ 1.15
DDX54-208ENST00000551344 ASPRV1Q53RT3 343 aa22.23■■□□□ 1.15
DDX54-208ENST00000551344 LSG1Q9H089 658 aaKnown RBP22.23■■□□□ 1.15
DDX54-208ENST00000551344 A1CFQ9NQ94 594 aaKnown RBP22.23■■□□□ 1.15
DDX54-208ENST00000551344 PFASO15067 1338 aa22.23■■□□□ 1.15
DDX54-208ENST00000551344 EVI5O60447 810 aa22.22■■□□□ 1.15
DDX54-208ENST00000551344 SNAI1O95863 264 aaPredicted RBP22.22■■□□□ 1.15
DDX54-208ENST00000551344 ZNF865P0CJ78 1059 aaPredicted RBP22.22■■□□□ 1.15
DDX54-208ENST00000551344 GOLGA8HP0CJ92 632 aa22.22■■□□□ 1.15
DDX54-208ENST00000551344 FAM133AQ8N9E0 248 aa22.22■■□□□ 1.15
DDX54-208ENST00000551344 ERICH2A1L162 156 aa22.21■■□□□ 1.15
DDX54-208ENST00000551344 H0YGN5 161 aa22.21■■□□□ 1.15
DDX54-208ENST00000551344 DNM1LO00429 736 aa22.21■■□□□ 1.15
DDX54-208ENST00000551344 PARP1P09874 1014 aaKnown RBP22.21■■□□□ 1.15
DDX54-208ENST00000551344 MUM1L1Q5H9M0 696 aa22.21■■□□□ 1.15
DDX54-208ENST00000551344 CASC1Q6TDU7 716 aa22.21■■□□□ 1.15
DDX54-208ENST00000551344 PLXNA1Q9UIW2 1896 aa22.2■■□□□ 1.14
DDX54-208ENST00000551344 IFIT3O14879 490 aaKnown RBP22.2■■□□□ 1.14
DDX54-208ENST00000551344 TAL1P17542 331 aaPredicted RBP22.2■■□□□ 1.14
DDX54-208ENST00000551344 CNTN2Q02246 1040 aa22.2■■□□□ 1.14
DDX54-208ENST00000551344 SART3Q15020 963 aaKnown RBP22.2■■□□□ 1.14
DDX54-208ENST00000551344 STOX1Q6ZVD7 989 aa22.2■■□□□ 1.14
DDX54-208ENST00000551344 FGD4Q96M96 766 aa22.2■■□□□ 1.14
DDX54-208ENST00000551344 UBA5Q9GZZ9 404 aa22.2■■□□□ 1.14
DDX54-208ENST00000551344 ABHD16BQ9H3Z7 469 aa22.2■■□□□ 1.14
DDX54-208ENST00000551344 CYP39A1Q9NYL5 469 aa22.2■■□□□ 1.14
DDX54-208ENST00000551344 TAF6LQ9Y6J9 622 aa22.2■■□□□ 1.14
DDX54-208ENST00000551344 WDR19Q8NEZ3 1342 aa22.2■■□□□ 1.14
DDX54-208ENST00000551344 RARBP10826 455 aa22.19■■□□□ 1.14
DDX54-208ENST00000551344 AKR1A1P14550 325 aa22.19■■□□□ 1.14
DDX54-208ENST00000551344 NECTIN1Q15223 517 aa22.19■■□□□ 1.14
DDX54-208ENST00000551344 ANO1Q5XXA6 986 aa22.19■■□□□ 1.14
DDX54-208ENST00000551344 ANO2Q9NQ90 1003 aa22.19■■□□□ 1.14
DDX54-208ENST00000551344 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.19■■□□□ 1.14
DDX54-208ENST00000551344 FAM184BQ9ULE4 1060 aa22.19■■□□□ 1.14
DDX54-208ENST00000551344 ASB14A6NK59 587 aa22.18■■□□□ 1.14
DDX54-208ENST00000551344 ACVR2BQ13705 512 aa22.18■■□□□ 1.14
DDX54-208ENST00000551344 NSMFQ6X4W1 530 aa22.18■■□□□ 1.14
DDX54-208ENST00000551344 ARMCX2Q7L311 632 aa22.18■■□□□ 1.14
DDX54-208ENST00000551344 CCDC144CPQ8IYA2 1237 aa22.18■■□□□ 1.14
DDX54-208ENST00000551344 ADGRF4Q8IZF3 695 aa22.18■■□□□ 1.14
DDX54-208ENST00000551344 MTA3Q9BTC8 594 aa22.18■■□□□ 1.14
DDX54-208ENST00000551344 CEP290O15078 2479 aa22.18■■□□□ 1.14
DDX54-208ENST00000551344 SMCHD1A6NHR9 2005 aa22.18■■□□□ 1.14
DDX54-208ENST00000551344 SOWAHBA6NEL2 793 aa22.17■■□□□ 1.14
DDX54-208ENST00000551344 CDC45O75419 566 aa22.17■■□□□ 1.14
DDX54-208ENST00000551344 WTAPQ15007 396 aa22.17■■□□□ 1.14
DDX54-208ENST00000551344 GJC2Q5T442 439 aaPredicted RBP22.17■■□□□ 1.14
DDX54-208ENST00000551344 ERICH6BQ5W0A0 696 aa22.17■■□□□ 1.14
DDX54-208ENST00000551344 MB21D2Q8IYB1 491 aaPredicted RBP22.17■■□□□ 1.14
DDX54-208ENST00000551344 SENP6Q9GZR1 1112 aaPredicted RBP22.17■■□□□ 1.14
DDX54-208ENST00000551344 MAF1Q9H063 256 aa22.17■■□□□ 1.14
DDX54-208ENST00000551344 CPVLQ9H3G5 476 aa22.17■■□□□ 1.14
DDX54-208ENST00000551344 KBTBD13C9JR72 458 aa22.16■■□□□ 1.14
DDX54-208ENST00000551344 SLC27A2O14975 620 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms