RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 RFPL3O75679 317 aa7.24□□□□□ -1.25
CPSF6-206ENST00000550987 S100BP04271 92 aaPredicted RBP7.24□□□□□ -1.25
CPSF6-206ENST00000550987 VIL1P09327 827 aaKnown RBP7.24□□□□□ -1.25
CPSF6-206ENST00000550987 ITGA4P13612 1032 aa7.24□□□□□ -1.25
CPSF6-206ENST00000550987 ELNP15502 786 aa7.24□□□□□ -1.25
CPSF6-206ENST00000550987 CD247P20963 164 aa7.24□□□□□ -1.25
CPSF6-206ENST00000550987 SOX5P35711 763 aa7.24□□□□□ -1.25
CPSF6-206ENST00000550987 RGS19P49795 217 aa7.24□□□□□ -1.25
CPSF6-206ENST00000550987 AUHQ13825 339 aaKnown RBP7.24□□□□□ -1.25
CPSF6-206ENST00000550987 FNDC3BQ53EP0 1204 aaKnown RBP7.24□□□□□ -1.25
CPSF6-206ENST00000550987 TM4SF20Q53R12 229 aa7.24□□□□□ -1.25
CPSF6-206ENST00000550987 ANKRD39Q53RE8 183 aa7.24□□□□□ -1.25
CPSF6-206ENST00000550987 NBPF12Q5TAG4 269 aaPredicted RBP7.24□□□□□ -1.25
CPSF6-206ENST00000550987 YOD1Q5VVQ6 348 aaPredicted RBP7.24□□□□□ -1.25
CPSF6-206ENST00000550987 CNNM4Q6P4Q7 775 aa7.24□□□□□ -1.25
CPSF6-206ENST00000550987 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.24□□□□□ -1.25
CPSF6-206ENST00000550987 C7orf61Q8IZ16 206 aa7.24□□□□□ -1.25
CPSF6-206ENST00000550987 AGGF1Q8N302 714 aaeCLIP7.24□□□□□ -1.25
CPSF6-206ENST00000550987 SVOPQ8N4V2 548 aa7.24□□□□□ -1.25
CPSF6-206ENST00000550987 CRACR2BQ8N4Y2 399 aaPredicted RBP7.24□□□□□ -1.25
CPSF6-206ENST00000550987 C2CD4AQ8NCU7 369 aaPredicted RBP7.24□□□□□ -1.25
CPSF6-206ENST00000550987 ADCY4Q8NFM4 1077 aa7.24□□□□□ -1.25
CPSF6-206ENST00000550987 TRIM11Q96F44 468 aa7.24□□□□□ -1.25
CPSF6-206ENST00000550987 EXOC2Q96KP1 924 aa7.24□□□□□ -1.25
CPSF6-206ENST00000550987 MIPEPQ99797 713 aa7.24□□□□□ -1.25
CPSF6-206ENST00000550987 YIPF2Q9BWQ6 316 aa7.24□□□□□ -1.25
CPSF6-206ENST00000550987 KLHL25Q9H0H3 589 aa7.24□□□□□ -1.25
CPSF6-206ENST00000550987 CAAP1Q9H8G2 361 aa7.24□□□□□ -1.25
CPSF6-206ENST00000550987 SPON1Q9HCB6 807 aa7.24□□□□□ -1.25
CPSF6-206ENST00000550987 NCOA5Q9HCD5 579 aaKnown RBP7.24□□□□□ -1.25
CPSF6-206ENST00000550987 APEX2Q9UBZ4 518 aa7.24□□□□□ -1.25
CPSF6-206ENST00000550987 USP21Q9UK80 565 aa7.24□□□□□ -1.25
CPSF6-206ENST00000550987 DAGLAQ9Y4D2 1042 aa7.24□□□□□ -1.25
CPSF6-206ENST00000550987 MYOM1P52179 1685 aa7.24□□□□□ -1.25
CPSF6-206ENST00000550987 PDE4DIPQ5VU43 2346 aa7.24□□□□□ -1.25
CPSF6-206ENST00000550987 ARHGAP23Q9P227 1491 aa7.24□□□□□ -1.25
CPSF6-206ENST00000550987 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.23□□□□□ -1.25
CPSF6-206ENST00000550987 TIAF1O95411 115 aa7.23□□□□□ -1.25
CPSF6-206ENST00000550987 APPP05067 770 aa7.23□□□□□ -1.25
CPSF6-206ENST00000550987 PABPC1P11940 636 aaKnown RBP7.23□□□□□ -1.25
CPSF6-206ENST00000550987 ETV3P41162 512 aa7.23□□□□□ -1.25
CPSF6-206ENST00000550987 SUMO1P63165 101 aaKnown RBP7.23□□□□□ -1.25
CPSF6-206ENST00000550987 NFKB2Q00653 900 aa7.23□□□□□ -1.25
CPSF6-206ENST00000550987 LETMD1Q6P1Q0 360 aa7.23□□□□□ -1.25
CPSF6-206ENST00000550987 CDH24Q86UP0 819 aa7.23□□□□□ -1.25
CPSF6-206ENST00000550987 FERMT3Q86UX7 667 aa7.23□□□□□ -1.25
CPSF6-206ENST00000550987 ZNF227Q86WZ6 799 aa7.23□□□□□ -1.25
CPSF6-206ENST00000550987 RPUSD2Q8IZ73 545 aaKnown RBP7.23□□□□□ -1.25
CPSF6-206ENST00000550987 WHAMMQ8TF30 809 aa7.23□□□□□ -1.25
CPSF6-206ENST00000550987 KISS1RQ969F8 398 aaPredicted RBP7.23□□□□□ -1.25
CPSF6-206ENST00000550987 KREMEN1Q96MU8 473 aa7.23□□□□□ -1.25
CPSF6-206ENST00000550987 CEP41Q9BYV8 373 aa7.23□□□□□ -1.25
CPSF6-206ENST00000550987 HOMER2Q9NSB8 354 aa7.23□□□□□ -1.25
CPSF6-206ENST00000550987 KLHL42Q9P2K6 505 aa7.23□□□□□ -1.25
CPSF6-206ENST00000550987 AHDC1Q5TGY3 1603 aaPredicted RBP7.23□□□□□ -1.25
CPSF6-206ENST00000550987 GNB5O14775 395 aa7.22□□□□□ -1.25
CPSF6-206ENST00000550987 CBFA2T2O43439 604 aa7.22□□□□□ -1.25
CPSF6-206ENST00000550987 PDE8AO60658 829 aa7.22□□□□□ -1.25
CPSF6-206ENST00000550987 HSPA1AP0DMV8 641 aaKnown RBP7.22□□□□□ -1.25
CPSF6-206ENST00000550987 HSPA1BP0DMV9 641 aaKnown RBP7.22□□□□□ -1.25
CPSF6-206ENST00000550987 FGFR1P11362 822 aa7.22□□□□□ -1.25
CPSF6-206ENST00000550987 GLB1P16278 677 aa7.22□□□□□ -1.25
CPSF6-206ENST00000550987 GMPRP36959 345 aa7.22□□□□□ -1.25
CPSF6-206ENST00000550987 TMEM130Q8N3G9 435 aa7.22□□□□□ -1.25
CPSF6-206ENST00000550987 UBR7Q8N806 425 aa7.22□□□□□ -1.25
CPSF6-206ENST00000550987 PRPF38AQ8NAV1 312 aaKnown RBP7.22□□□□□ -1.25
CPSF6-206ENST00000550987 LGR4Q9BXB1 951 aa7.22□□□□□ -1.25
CPSF6-206ENST00000550987 GSX1Q9H4S2 264 aaPredicted RBP7.22□□□□□ -1.25
CPSF6-206ENST00000550987 MKL2Q9ULH7 1088 aa7.22□□□□□ -1.25
CPSF6-206ENST00000550987 ATP8A1Q9Y2Q0 1164 aa7.22□□□□□ -1.25
CPSF6-206ENST00000550987 PCDHB12Q9Y5F1 795 aa7.22□□□□□ -1.25
CPSF6-206ENST00000550987 MAP3K1Q13233 1512 aa7.22□□□□□ -1.25
CPSF6-206ENST00000550987 ATP10DQ9P241 1426 aa7.21□□□□□ -1.25
CPSF6-206ENST00000550987 CUL9Q8IWT3 2517 aa7.21□□□□□ -1.26
CPSF6-206ENST00000550987 F8W735 103 aaPredicted RBP7.21□□□□□ -1.26
CPSF6-206ENST00000550987 ALX3O95076 343 aa7.21□□□□□ -1.26
CPSF6-206ENST00000550987 KCNH1O95259 989 aa7.21□□□□□ -1.26
CPSF6-206ENST00000550987 PDGFRBP09619 1106 aa7.21□□□□□ -1.26
CPSF6-206ENST00000550987 KCNJ6P48051 423 aa7.21□□□□□ -1.26
CPSF6-206ENST00000550987 PPP2R5DQ14738 602 aa7.21□□□□□ -1.26
CPSF6-206ENST00000550987 PLEKHG6Q3KR16 790 aa7.21□□□□□ -1.26
CPSF6-206ENST00000550987 WWC2Q6AWC2 1192 aa7.21□□□□□ -1.26
CPSF6-206ENST00000550987 ATL2Q8NHH9 583 aa7.21□□□□□ -1.26
CPSF6-206ENST00000550987 PPP1R13LQ8WUF5 828 aa7.21□□□□□ -1.26
CPSF6-206ENST00000550987 BRF1Q92994 677 aa7.21□□□□□ -1.26
CPSF6-206ENST00000550987 IER2Q9BTL4 223 aa7.21□□□□□ -1.26
CPSF6-206ENST00000550987 MRPL4Q9BYD3 311 aaKnown RBP7.21□□□□□ -1.26
CPSF6-206ENST00000550987 AKTIPQ9H8T0 292 aa7.21□□□□□ -1.26
CPSF6-206ENST00000550987 GP6Q9HCN6 339 aa7.21□□□□□ -1.26
CPSF6-206ENST00000550987 MCM8Q9UJA3 840 aa7.21□□□□□ -1.26
CPSF6-206ENST00000550987 G3BP2Q9UN86 482 aaKnown RBP7.21□□□□□ -1.26
CPSF6-206ENST00000550987 DISP1Q96F81 1524 aa7.21□□□□□ -1.26
CPSF6-206ENST00000550987 REREQ9P2R6 1566 aa7.2□□□□□ -1.26
CPSF6-206ENST00000550987 ATRNO75882 1429 aa7.2□□□□□ -1.26
CPSF6-206ENST00000550987 ZC3H13Q5T200 1668 aaKnown RBP7.2□□□□□ -1.26
CPSF6-206ENST00000550987 DNAJC25-GNG10A0A024R161 153 aa7.2□□□□□ -1.26
CPSF6-206ENST00000550987 NFICP08651 508 aa7.2□□□□□ -1.26
CPSF6-206ENST00000550987 CPEP16870 476 aa7.2□□□□□ -1.26
CPSF6-206ENST00000550987 HOXB4P17483 251 aaPredicted RBP7.2□□□□□ -1.26
CPSF6-206ENST00000550987 CYP7A1P22680 504 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms