RNA–Protein interactions for RNA: ENST00000550974.1

GPN3-208, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5

Gene GPN3, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-208ENST00000550974 IL15P40933 162 aaPredicted RBP13.85□□□□□ -0.19
GPN3-208ENST00000550974 EXOSC9Q06265 439 aaKnown RBP13.85□□□□□ -0.19
GPN3-208ENST00000550974 NAA16Q6N069 864 aaPredicted RBP13.85□□□□□ -0.19
GPN3-208ENST00000550974 SPICE1Q8N0Z3 855 aa13.85□□□□□ -0.19
GPN3-208ENST00000550974 DDX11Q96FC9 970 aa13.85□□□□□ -0.19
GPN3-208ENST00000550974 XAGE2Q96GT9 111 aa13.85□□□□□ -0.19
GPN3-208ENST00000550974 SEZ6LQ9BYH1 1024 aa13.85□□□□□ -0.19
GPN3-208ENST00000550974 ALDH8A1Q9H2A2 487 aaPredicted RBP13.85□□□□□ -0.19
GPN3-208ENST00000550974 ABHD16BQ9H3Z7 469 aa13.85□□□□□ -0.19
GPN3-208ENST00000550974 TRMT13Q9NUP7 481 aaKnown RBP13.85□□□□□ -0.19
GPN3-208ENST00000550974 CLDND1Q9NY35 253 aa13.85□□□□□ -0.19
GPN3-208ENST00000550974 SERPINB13Q9UIV8 391 aa13.85□□□□□ -0.19
GPN3-208ENST00000550974 FBXO3Q9UK99 471 aa13.85□□□□□ -0.19
GPN3-208ENST00000550974 FANCIQ9NVI1 1328 aa13.85□□□□□ -0.19
GPN3-208ENST00000550974 KMT2EQ8IZD2 1858 aa13.84□□□□□ -0.19
GPN3-208ENST00000550974 RFC2P35250 354 aa13.84□□□□□ -0.19
GPN3-208ENST00000550974 STAT3P40763 770 aa13.84□□□□□ -0.19
GPN3-208ENST00000550974 PPP4CP60510 307 aa13.84□□□□□ -0.19
GPN3-208ENST00000550974 ZXDAP98168 799 aa13.84□□□□□ -0.19
GPN3-208ENST00000550974 MVPQ14764 893 aaKnown RBP13.84□□□□□ -0.19
GPN3-208ENST00000550974 SMAD2Q15796 467 aaKnown RBP13.84□□□□□ -0.19
GPN3-208ENST00000550974 CLUL1Q15846 466 aa13.84□□□□□ -0.19
GPN3-208ENST00000550974 TCEAL5Q5H9L2 206 aa13.84□□□□□ -0.19
GPN3-208ENST00000550974 BANK1Q8NDB2 785 aa13.84□□□□□ -0.19
GPN3-208ENST00000550974 MRPL38Q96DV4 380 aaKnown RBP13.84□□□□□ -0.19
GPN3-208ENST00000550974 CRBNQ96SW2 442 aa13.84□□□□□ -0.19
GPN3-208ENST00000550974 CTNNA3Q9UI47 895 aa13.84□□□□□ -0.19
GPN3-208ENST00000550974 MYO15AQ9UKN7 3530 aa13.84□□□□□ -0.19
GPN3-208ENST00000550974 CACNA1GO43497 2377 aa13.83□□□□□ -0.19
GPN3-208ENST00000550974 CDK5RAP2Q96SN8 1893 aa13.83□□□□□ -0.2
GPN3-208ENST00000550974 PTPRZ1P23471 2315 aaPredicted RBP13.83□□□□□ -0.2
GPN3-208ENST00000550974 A0A1B0GUL7 405 aa13.83□□□□□ -0.2
GPN3-208ENST00000550974 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.83□□□□□ -0.2
GPN3-208ENST00000550974 LINC01553A4QN01 128 aa13.83□□□□□ -0.2
GPN3-208ENST00000550974 MPHOSPH10O00566 681 aaKnown RBP13.83□□□□□ -0.2
GPN3-208ENST00000550974 BAIAP3O94812 1187 aa13.83□□□□□ -0.2
GPN3-208ENST00000550974 IQCF3P0C7M6 154 aa13.83□□□□□ -0.2
GPN3-208ENST00000550974 SUPT20HL2P0C7V6 817 aa13.83□□□□□ -0.2
GPN3-208ENST00000550974 NKX3-2P78367 333 aa13.83□□□□□ -0.2
GPN3-208ENST00000550974 PTPROQ16827 1216 aa13.83□□□□□ -0.2
GPN3-208ENST00000550974 ADGRA1Q86SQ6 560 aa13.83□□□□□ -0.2
GPN3-208ENST00000550974 WWC1Q8IX03 1113 aa13.83□□□□□ -0.2
GPN3-208ENST00000550974 FBXO22Q8NEZ5 403 aa13.83□□□□□ -0.2
GPN3-208ENST00000550974 ASTN1O14525 1302 aa13.83□□□□□ -0.2
GPN3-208ENST00000550974 SCN5AQ14524 2016 aa13.82□□□□□ -0.2
GPN3-208ENST00000550974 STXBP3O00186 592 aa13.82□□□□□ -0.2
GPN3-208ENST00000550974 ZEB2O60315 1214 aa13.82□□□□□ -0.2
GPN3-208ENST00000550974 NBL1P41271 181 aa13.82□□□□□ -0.2
GPN3-208ENST00000550974 WDR5P61964 334 aaKnown RBP13.82□□□□□ -0.2
GPN3-208ENST00000550974 DEFB103AP81534 67 aa13.82□□□□□ -0.2
GPN3-208ENST00000550974 TNFAIP2Q03169 654 aa13.82□□□□□ -0.2
GPN3-208ENST00000550974 FSCN1Q16658 493 aaKnown RBP13.82□□□□□ -0.2
GPN3-208ENST00000550974 TIGD5Q53EQ6 642 aa13.82□□□□□ -0.2
GPN3-208ENST00000550974 RETREG2Q8NC44 543 aa13.82□□□□□ -0.2
GPN3-208ENST00000550974 NKD2Q969F2 451 aaPredicted RBP13.82□□□□□ -0.2
GPN3-208ENST00000550974 RMDN1Q96DB5 314 aa13.82□□□□□ -0.2
GPN3-208ENST00000550974 RAD9AQ99638 391 aa13.82□□□□□ -0.2
GPN3-208ENST00000550974 C17orf80Q9BSJ5 609 aa13.82□□□□□ -0.2
GPN3-208ENST00000550974 USP44Q9H0E7 712 aa13.82□□□□□ -0.2
GPN3-208ENST00000550974 PA2G4Q9UQ80 394 aaKnown RBP13.82□□□□□ -0.2
GPN3-208ENST00000550974 TNKSO95271 1327 aa13.82□□□□□ -0.2
GPN3-208ENST00000550974 MBTPS2O43462 519 aa13.81□□□□□ -0.2
GPN3-208ENST00000550974 PTGS1P23219 599 aa13.81□□□□□ -0.2
GPN3-208ENST00000550974 SHMT1P34896 483 aa13.81□□□□□ -0.2
GPN3-208ENST00000550974 DYNLL1P63167 89 aaKnown RBP13.81□□□□□ -0.2
GPN3-208ENST00000550974 COL9A2Q14055 689 aaPredicted RBP13.81□□□□□ -0.2
GPN3-208ENST00000550974 ZNF467Q7Z7K2 595 aaPredicted RBP13.81□□□□□ -0.2
GPN3-208ENST00000550974 TLK2Q86UE8 772 aa13.81□□□□□ -0.2
GPN3-208ENST00000550974 NEUROD6Q96NK8 337 aa13.81□□□□□ -0.2
GPN3-208ENST00000550974 AP5M1Q9H0R1 490 aa13.81□□□□□ -0.2
GPN3-208ENST00000550974 EHD4Q9H223 541 aa13.81□□□□□ -0.2
GPN3-208ENST00000550974 DNAJC25-GNG10A0A024R161 153 aa13.8□□□□□ -0.2
GPN3-208ENST00000550974 DYNC1LI2O43237 492 aaPredicted RBP13.8□□□□□ -0.2
GPN3-208ENST00000550974 COPB2P35606 906 aa13.8□□□□□ -0.2
GPN3-208ENST00000550974 USP5P45974 858 aa13.8□□□□□ -0.2
GPN3-208ENST00000550974 SLC4A3P48751 1232 aa13.8□□□□□ -0.2
GPN3-208ENST00000550974 NBPF20Q3BBV1 942 aa13.8□□□□□ -0.2
GPN3-208ENST00000550974 GORABQ5T7V8 394 aa13.8□□□□□ -0.2
GPN3-208ENST00000550974 FAM117BQ6P1L5 589 aa13.8□□□□□ -0.2
GPN3-208ENST00000550974 ARMCX2Q7L311 632 aa13.8□□□□□ -0.2
GPN3-208ENST00000550974 FBXO28Q9NVF7 368 aa13.8□□□□□ -0.2
GPN3-208ENST00000550974 ZNF214Q9UL59 606 aaPredicted RBP13.8□□□□□ -0.2
GPN3-208ENST00000550974 ADAMTS5Q9UNA0 930 aa13.8□□□□□ -0.2
GPN3-208ENST00000550974 IL16Q14005 1332 aa13.8□□□□□ -0.2
GPN3-208ENST00000550974 VWA5AO00534 786 aa13.79□□□□□ -0.2
GPN3-208ENST00000550974 GALR2O43603 387 aaPredicted RBP13.79□□□□□ -0.2
GPN3-208ENST00000550974 GJB5O95377 273 aa13.79□□□□□ -0.2
GPN3-208ENST00000550974 LTBRP36941 435 aa13.79□□□□□ -0.2
GPN3-208ENST00000550974 SIGLEC14Q08ET2 396 aa13.79□□□□□ -0.2
GPN3-208ENST00000550974 FRMD5Q7Z6J6 570 aa13.79□□□□□ -0.2
GPN3-208ENST00000550974 TTC6Q86TZ1 520 aa13.79□□□□□ -0.2
GPN3-208ENST00000550974 RPAINQ86UA6 219 aa13.79□□□□□ -0.2
GPN3-208ENST00000550974 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.79□□□□□ -0.2
GPN3-208ENST00000550974 COL26A1Q96A83 441 aa13.79□□□□□ -0.2
GPN3-208ENST00000550974 NSUN3Q9H649 340 aaKnown RBP13.79□□□□□ -0.2
GPN3-208ENST00000550974 DLX2Q07687 328 aaPredicted RBP13.78□□□□□ -0.2
GPN3-208ENST00000550974 MKRN4PQ13434 485 aaPredicted RBP13.78□□□□□ -0.2
GPN3-208ENST00000550974 COL19A1Q14993 1142 aa13.78□□□□□ -0.2
GPN3-208ENST00000550974 FAM47CQ5HY64 1035 aa13.78□□□□□ -0.2
GPN3-208ENST00000550974 CCDC144CPQ8IYA2 1237 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms