RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 CST5P28325 142 aaPredicted RBP25.78■■□□□ 1.72
SMARCC2-210ENST00000550519 FAAP100Q0VG06 881 aa25.78■■□□□ 1.72
SMARCC2-210ENST00000550519 GMCL1Q96IK5 515 aa25.78■■□□□ 1.72
SMARCC2-210ENST00000550519 SALL3Q9BXA9 1300 aa25.78■■□□□ 1.72
SMARCC2-210ENST00000550519 MYADML2A6NDP7 307 aa25.77■■□□□ 1.72
SMARCC2-210ENST00000550519 ADCY6O43306 1168 aa25.77■■□□□ 1.72
SMARCC2-210ENST00000550519 STAT2P52630 851 aa25.77■■□□□ 1.72
SMARCC2-210ENST00000550519 EPHB4P54760 987 aa25.77■■□□□ 1.72
SMARCC2-210ENST00000550519 ARMCX2Q7L311 632 aa25.77■■□□□ 1.72
SMARCC2-210ENST00000550519 TMEM39AQ9NV64 488 aa25.77■■□□□ 1.72
SMARCC2-210ENST00000550519 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.77■■□□□ 1.72
SMARCC2-210ENST00000550519 IRX5P78411 483 aaPredicted RBP25.76■■□□□ 1.71
SMARCC2-210ENST00000550519 CCDC144BQ3MJ40 725 aa25.76■■□□□ 1.71
SMARCC2-210ENST00000550519 FAM160B2Q86V87 743 aa25.76■■□□□ 1.71
SMARCC2-210ENST00000550519 CHURC1Q8WUH1 139 aa25.76■■□□□ 1.71
SMARCC2-210ENST00000550519 STAG1Q8WVM7 1258 aa25.76■■□□□ 1.71
SMARCC2-210ENST00000550519 KATNBL1Q9H079 304 aa25.76■■□□□ 1.71
SMARCC2-210ENST00000550519 UPF3AQ9H1J1 476 aaKnown RBP25.76■■□□□ 1.71
SMARCC2-210ENST00000550519 SEMA6BQ9H3T3 888 aa25.76■■□□□ 1.71
SMARCC2-210ENST00000550519 HOMER2Q9NSB8 354 aa25.76■■□□□ 1.71
SMARCC2-210ENST00000550519 ZNF536O15090 1300 aa25.76■■□□□ 1.71
SMARCC2-210ENST00000550519 ELP1O95163 1332 aa25.76■■□□□ 1.71
SMARCC2-210ENST00000550519 DCDC2CA8MYV0 355 aa25.75■■□□□ 1.71
SMARCC2-210ENST00000550519 PLA2G6O60733 806 aa25.75■■□□□ 1.71
SMARCC2-210ENST00000550519 SLC1A4P43007 532 aa25.75■■□□□ 1.71
SMARCC2-210ENST00000550519 GJA9P57773 515 aa25.75■■□□□ 1.71
SMARCC2-210ENST00000550519 PPP4R3BQ5MIZ7 849 aa25.75■■□□□ 1.71
SMARCC2-210ENST00000550519 CCDC144CPQ8IYA2 1237 aa25.75■■□□□ 1.71
SMARCC2-210ENST00000550519 FAM133AQ8N9E0 248 aa25.75■■□□□ 1.71
SMARCC2-210ENST00000550519 CDX2Q99626 313 aaPredicted RBP25.75■■□□□ 1.71
SMARCC2-210ENST00000550519 ACAD9Q9H845 621 aa25.75■■□□□ 1.71
SMARCC2-210ENST00000550519 C6orf222P0C671 652 aaPredicted RBP25.74■■□□□ 1.71
SMARCC2-210ENST00000550519 MCCP23508 829 aa25.74■■□□□ 1.71
SMARCC2-210ENST00000550519 CDK7P50613 346 aa25.74■■□□□ 1.71
SMARCC2-210ENST00000550519 CNTN2Q02246 1040 aa25.74■■□□□ 1.71
SMARCC2-210ENST00000550519 FPGSQ05932 587 aa25.74■■□□□ 1.71
SMARCC2-210ENST00000550519 CCDC129Q6ZRS4 1044 aa25.74■■□□□ 1.71
SMARCC2-210ENST00000550519 PCSK9Q8NBP7 692 aaKnown RBP25.74■■□□□ 1.71
SMARCC2-210ENST00000550519 AGBL1Q96MI9 1066 aa25.74■■□□□ 1.71
SMARCC2-210ENST00000550519 GLT1D1Q96MS3 346 aa25.74■■□□□ 1.71
SMARCC2-210ENST00000550519 A1CFQ9NQ94 594 aaKnown RBP25.74■■□□□ 1.71
SMARCC2-210ENST00000550519 IL17RBQ9NRM6 502 aa25.74■■□□□ 1.71
SMARCC2-210ENST00000550519 ASGR1P07306 291 aa25.73■■□□□ 1.71
SMARCC2-210ENST00000550519 NKX3-2P78367 333 aa25.73■■□□□ 1.71
SMARCC2-210ENST00000550519 CTDSPL2Q05D32 466 aa25.73■■□□□ 1.71
SMARCC2-210ENST00000550519 RNPC3Q96LT9 517 aaKnown RBP25.73■■□□□ 1.71
SMARCC2-210ENST00000550519 TTYH1Q9H313 450 aaPredicted RBP25.73■■□□□ 1.71
SMARCC2-210ENST00000550519 SPC25Q9HBM1 224 aa25.73■■□□□ 1.71
SMARCC2-210ENST00000550519 INCENPQ9NQS7 918 aa25.73■■□□□ 1.71
SMARCC2-210ENST00000550519 TBX21Q9UL17 535 aa25.73■■□□□ 1.71
SMARCC2-210ENST00000550519 ISY1Q9ULR0 285 aaKnown RBP25.73■■□□□ 1.71
SMARCC2-210ENST00000550519 STX8Q9UNK0 236 aa25.73■■□□□ 1.71
SMARCC2-210ENST00000550519 TSPY2A6NKD2 308 aa25.72■■□□□ 1.71
SMARCC2-210ENST00000550519 TKFCQ3LXA3 575 aa25.72■■□□□ 1.71
SMARCC2-210ENST00000550519 RCSD1Q6JBY9 416 aa25.72■■□□□ 1.71
SMARCC2-210ENST00000550519 RNF146Q9NTX7 359 aa25.72■■□□□ 1.71
SMARCC2-210ENST00000550519 ANAPC4Q9UJX5 808 aa25.72■■□□□ 1.71
SMARCC2-210ENST00000550519 UNC80Q8N2C7 3258 aa25.72■■□□□ 1.71
SMARCC2-210ENST00000550519 MROH7Q68CQ1 1323 aa25.71■■□□□ 1.71
SMARCC2-210ENST00000550519 SOWAHBA6NEL2 793 aa25.71■■□□□ 1.71
SMARCC2-210ENST00000550519 CTAGE5O15320 804 aa25.71■■□□□ 1.71
SMARCC2-210ENST00000550519 NMT2O60551 498 aa25.71■■□□□ 1.71
SMARCC2-210ENST00000550519 TIMP1P01033 207 aa25.71■■□□□ 1.71
SMARCC2-210ENST00000550519 NOVP48745 357 aa25.71■■□□□ 1.71
SMARCC2-210ENST00000550519 IKQ13123 557 aaPredicted RBP25.71■■□□□ 1.71
SMARCC2-210ENST00000550519 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.71■■□□□ 1.71
SMARCC2-210ENST00000550519 GNASQ5JWF2 1037 aa25.7■■□□□ 1.7
SMARCC2-210ENST00000550519 VPS53Q5VIR6 699 aa25.7■■□□□ 1.7
SMARCC2-210ENST00000550519 KCTD1Q719H9 257 aa25.7■■□□□ 1.7
SMARCC2-210ENST00000550519 CHMP4CQ96CF2 233 aa25.7■■□□□ 1.7
SMARCC2-210ENST00000550519 TRERF1Q96PN7 1200 aa25.7■■□□□ 1.7
SMARCC2-210ENST00000550519 TMEM265A0A087WTH1 108 aa25.69■■□□□ 1.7
SMARCC2-210ENST00000550519 FGRP09769 529 aa25.69■■□□□ 1.7
SMARCC2-210ENST00000550519 ALX1Q15699 326 aa25.69■■□□□ 1.7
SMARCC2-210ENST00000550519 ANKRD45Q5TZF3 282 aa25.69■■□□□ 1.7
SMARCC2-210ENST00000550519 EVI5LQ96CN4 794 aa25.69■■□□□ 1.7
SMARCC2-210ENST00000550519 PRR12Q9ULL5 1215 aa25.69■■□□□ 1.7
SMARCC2-210ENST00000550519 MCM3APO60318 1980 aa25.69■■□□□ 1.7
SMARCC2-210ENST00000550519 A0A0U1RQG5 324 aaPredicted RBP25.68■■□□□ 1.7
SMARCC2-210ENST00000550519 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.68■■□□□ 1.7
SMARCC2-210ENST00000550519 ASB14A6NK59 587 aa25.68■■□□□ 1.7
SMARCC2-210ENST00000550519 ARVCFO00192 962 aa25.68■■□□□ 1.7
SMARCC2-210ENST00000550519 ORC4O43929 436 aa25.68■■□□□ 1.7
SMARCC2-210ENST00000550519 ALAS1P13196 640 aa25.68■■□□□ 1.7
SMARCC2-210ENST00000550519 RRP1P56182 461 aaKnown RBP25.68■■□□□ 1.7
SMARCC2-210ENST00000550519 TNFAIP2Q03169 654 aa25.68■■□□□ 1.7
SMARCC2-210ENST00000550519 MFSD5Q6N075 450 aa25.68■■□□□ 1.7
SMARCC2-210ENST00000550519 RASGRP2Q7LDG7 609 aa25.68■■□□□ 1.7
SMARCC2-210ENST00000550519 VTI1AQ96AJ9 217 aa25.68■■□□□ 1.7
SMARCC2-210ENST00000550519 ASTN1O14525 1302 aa25.67■■□□□ 1.7
SMARCC2-210ENST00000550519 RANBP6O60518 1105 aaKnown RBP25.67■■□□□ 1.7
SMARCC2-210ENST00000550519 SNAP25P60880 206 aa25.67■■□□□ 1.7
SMARCC2-210ENST00000550519 CCDC174Q6PII3 467 aa25.67■■□□□ 1.7
SMARCC2-210ENST00000550519 HELLSQ9NRZ9 838 aa25.67■■□□□ 1.7
SMARCC2-210ENST00000550519 ZBTB47Q9UFB7 747 aaPredicted RBP25.67■■□□□ 1.7
SMARCC2-210ENST00000550519 GNEQ9Y223 722 aaKnown RBP25.67■■□□□ 1.7
SMARCC2-210ENST00000550519 PDE1AP54750 535 aa25.66■■□□□ 1.7
SMARCC2-210ENST00000550519 MUM1L1Q5H9M0 696 aa25.66■■□□□ 1.7
SMARCC2-210ENST00000550519 FAM126BQ8IXS8 530 aa25.66■■□□□ 1.7
SMARCC2-210ENST00000550519 MYLIPQ8WY64 445 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms