RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 ZBED4O75132 1171 aa15.17■□□□□ 0.02
RAB5C-206ENST00000550406 SMARCA1P28370 1054 aa15.17■□□□□ 0.02
RAB5C-206ENST00000550406 SCRN1Q12765 414 aa15.17■□□□□ 0.02
RAB5C-206ENST00000550406 FAM110CQ1W6H9 321 aa15.17■□□□□ 0.02
RAB5C-206ENST00000550406 NOM1Q5C9Z4 860 aaKnown RBP15.17■□□□□ 0.02
RAB5C-206ENST00000550406 CCDC82Q8N4S0 544 aa15.17■□□□□ 0.02
RAB5C-206ENST00000550406 MB21D1Q8N884 522 aa15.17■□□□□ 0.02
RAB5C-206ENST00000550406 NECAB1Q8N987 351 aa15.17■□□□□ 0.02
RAB5C-206ENST00000550406 GPRC5AQ8NFJ5 357 aa15.17■□□□□ 0.02
RAB5C-206ENST00000550406 AGBL1Q96MI9 1066 aa15.17■□□□□ 0.02
RAB5C-206ENST00000550406 SPZ1Q9BXG8 430 aa15.17■□□□□ 0.02
RAB5C-206ENST00000550406 MOV10L1Q9BXT6 1211 aaKnown RBP15.17■□□□□ 0.02
RAB5C-206ENST00000550406 SPATC1LQ9H0A9 340 aa15.17■□□□□ 0.02
RAB5C-206ENST00000550406 PORCNQ9H237 461 aa15.17■□□□□ 0.02
RAB5C-206ENST00000550406 RBM28Q9NW13 759 aaKnown RBP15.17■□□□□ 0.02
RAB5C-206ENST00000550406 CNTNAP5Q8WYK1 1306 aa15.17■□□□□ 0.02
RAB5C-206ENST00000550406 PPP1R11O60927 126 aaPredicted RBP15.16■□□□□ 0.02
RAB5C-206ENST00000550406 DTNBO60941 627 aa15.16■□□□□ 0.02
RAB5C-206ENST00000550406 FDX1P10109 184 aa15.16■□□□□ 0.02
RAB5C-206ENST00000550406 GNAQP50148 359 aa15.16■□□□□ 0.02
RAB5C-206ENST00000550406 SP3Q02447 781 aa15.16■□□□□ 0.02
RAB5C-206ENST00000550406 QRICH1Q2TAL8 776 aa15.16■□□□□ 0.02
RAB5C-206ENST00000550406 CCDC174Q6PII3 467 aa15.16■□□□□ 0.02
RAB5C-206ENST00000550406 CPXCR1Q8N123 301 aa15.16■□□□□ 0.02
RAB5C-206ENST00000550406 PIGSQ96S52 555 aa15.16■□□□□ 0.02
RAB5C-206ENST00000550406 LZTS2Q9BRK4 669 aa15.16■□□□□ 0.02
RAB5C-206ENST00000550406 ARHGAP39Q9C0H5 1083 aa15.16■□□□□ 0.02
RAB5C-206ENST00000550406 LIMCH1Q9UPQ0 1083 aa15.16■□□□□ 0.02
RAB5C-206ENST00000550406 hCG_1642624A0A1W2PR95 340 aa15.15■□□□□ 0.02
RAB5C-206ENST00000550406 CTDNEP1O95476 244 aa15.15■□□□□ 0.02
RAB5C-206ENST00000550406 STAT3P40763 770 aa15.15■□□□□ 0.02
RAB5C-206ENST00000550406 OAZ1P54368 228 aa15.15■□□□□ 0.02
RAB5C-206ENST00000550406 PPP2R5BQ15173 497 aa15.15■□□□□ 0.02
RAB5C-206ENST00000550406 CDC37Q16543 378 aaPredicted RBP15.15■□□□□ 0.02
RAB5C-206ENST00000550406 RIOX2Q8IUF8 465 aa15.15■□□□□ 0.02
RAB5C-206ENST00000550406 ZNF296Q8WUU4 475 aaPredicted RBP15.15■□□□□ 0.02
RAB5C-206ENST00000550406 SLKQ9H2G2 1235 aaPredicted RBP15.15■□□□□ 0.02
RAB5C-206ENST00000550406 EFCC1Q9HA90 598 aa15.15■□□□□ 0.02
RAB5C-206ENST00000550406 LCTP09848 1927 aa15.15■□□□□ 0.02
RAB5C-206ENST00000550406 ST18O60284 1047 aa15.14■□□□□ 0.01
RAB5C-206ENST00000550406 FKTNO75072 461 aa15.14■□□□□ 0.01
RAB5C-206ENST00000550406 PPFIA3O75145 1194 aa15.14■□□□□ 0.01
RAB5C-206ENST00000550406 ECM2O94769 699 aaPredicted RBP15.14■□□□□ 0.01
RAB5C-206ENST00000550406 ICAM1P05362 532 aa15.14■□□□□ 0.01
RAB5C-206ENST00000550406 LACTBP83111 547 aaPredicted RBP15.14■□□□□ 0.01
RAB5C-206ENST00000550406 PLS1Q14651 629 aa15.14■□□□□ 0.01
RAB5C-206ENST00000550406 SNRNP48Q6IEG0 339 aaKnown RBP15.14■□□□□ 0.01
RAB5C-206ENST00000550406 IL27Q8NEV9 243 aa15.14■□□□□ 0.01
RAB5C-206ENST00000550406 CD99L2Q8TCZ2 262 aa15.14■□□□□ 0.01
RAB5C-206ENST00000550406 PIBF1Q8WXW3 757 aa15.14■□□□□ 0.01
RAB5C-206ENST00000550406 PNMA6FA0A0J9YX94 578 aa15.13■□□□□ 0.01
RAB5C-206ENST00000550406 CCDC196A0A1B0GTZ2 297 aa15.13■□□□□ 0.01
RAB5C-206ENST00000550406 ZBTB5O15062 677 aa15.13■□□□□ 0.01
RAB5C-206ENST00000550406 DHX16O60231 1041 aaKnown RBP15.13■□□□□ 0.01
RAB5C-206ENST00000550406 IFNAR1P17181 557 aa15.13■□□□□ 0.01
RAB5C-206ENST00000550406 ERCC3P19447 782 aa15.13■□□□□ 0.01
RAB5C-206ENST00000550406 CTCFP49711 727 aaPredicted RBP15.13■□□□□ 0.01
RAB5C-206ENST00000550406 LBX1P52954 281 aa15.13■□□□□ 0.01
RAB5C-206ENST00000550406 HOMER1Q86YM7 354 aa15.13■□□□□ 0.01
RAB5C-206ENST00000550406 PHKBQ93100 1093 aa15.13■□□□□ 0.01
RAB5C-206ENST00000550406 GTF3C6Q969F1 213 aa15.13■□□□□ 0.01
RAB5C-206ENST00000550406 TRIM47Q96LD4 638 aa15.13■□□□□ 0.01
RAB5C-206ENST00000550406 TEX13BQ9BXU2 312 aa15.13■□□□□ 0.01
RAB5C-206ENST00000550406 PLXNA1Q9UIW2 1896 aa15.13■□□□□ 0.01
RAB5C-206ENST00000550406 V9GY48 417 aaPredicted RBP15.13■□□□□ 0.01
RAB5C-206ENST00000550406 RBBP6Q7Z6E9 1792 aaKnown RBP15.12■□□□□ 0.01
RAB5C-206ENST00000550406 PSMC4P43686 418 aa15.12■□□□□ 0.01
RAB5C-206ENST00000550406 SLC4A3P48751 1232 aa15.12■□□□□ 0.01
RAB5C-206ENST00000550406 PKN1Q16512 942 aa15.12■□□□□ 0.01
RAB5C-206ENST00000550406 MUM1L1Q5H9M0 696 aa15.12■□□□□ 0.01
RAB5C-206ENST00000550406 SHCBP1Q8NEM2 672 aa15.12■□□□□ 0.01
RAB5C-206ENST00000550406 ZSCAN31Q96LW9 406 aaPredicted RBP15.12■□□□□ 0.01
RAB5C-206ENST00000550406 CCPG1Q9ULG6 757 aa15.12■□□□□ 0.01
RAB5C-206ENST00000550406 CTDP1Q9Y5B0 961 aaPredicted RBP15.12■□□□□ 0.01
RAB5C-206ENST00000550406 PRPF3O43395 683 aaKnown RBP15.11■□□□□ 0.01
RAB5C-206ENST00000550406 SLC25A27O95847 323 aa15.11■□□□□ 0.01
RAB5C-206ENST00000550406 ALAS1P13196 640 aa15.11■□□□□ 0.01
RAB5C-206ENST00000550406 CCNA1P78396 465 aa15.11■□□□□ 0.01
RAB5C-206ENST00000550406 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.11■□□□□ 0.01
RAB5C-206ENST00000550406 NCAPG2Q86XI2 1143 aa15.11■□□□□ 0.01
RAB5C-206ENST00000550406 FBXO11Q86XK2 927 aa15.11■□□□□ 0.01
RAB5C-206ENST00000550406 NSUN7Q8NE18 718 aaKnown RBP15.11■□□□□ 0.01
RAB5C-206ENST00000550406 CLEC4DQ8WXI8 215 aa15.11■□□□□ 0.01
RAB5C-206ENST00000550406 COA7Q96BR5 231 aa15.11■□□□□ 0.01
RAB5C-206ENST00000550406 SHISA4Q96DD7 197 aa15.11■□□□□ 0.01
RAB5C-206ENST00000550406 RRP36Q96EU6 259 aaKnown RBP15.11■□□□□ 0.01
RAB5C-206ENST00000550406 TMX3Q96JJ7 454 aa15.11■□□□□ 0.01
RAB5C-206ENST00000550406 TRERF1Q96PN7 1200 aa15.11■□□□□ 0.01
RAB5C-206ENST00000550406 GJD2Q9UKL4 321 aa15.11■□□□□ 0.01
RAB5C-206ENST00000550406 ZNF236Q9UL36 1845 aa15.1■□□□□ 0.01
RAB5C-206ENST00000550406 OPLAHO14841 1288 aa15.1■□□□□ 0.01
RAB5C-206ENST00000550406 FMNL1O95466 1100 aaPredicted RBP15.1■□□□□ 0.01
RAB5C-206ENST00000550406 FDPSP14324 419 aaKnown RBP15.1■□□□□ 0.01
RAB5C-206ENST00000550406 MAPK4P31152 587 aa15.1■□□□□ 0.01
RAB5C-206ENST00000550406 USH1GQ495M9 461 aa15.1■□□□□ 0.01
RAB5C-206ENST00000550406 GPR142Q7Z601 462 aa15.1■□□□□ 0.01
RAB5C-206ENST00000550406 CCDC83Q8IWF9 413 aa15.1■□□□□ 0.01
RAB5C-206ENST00000550406 TBC1D5Q92609 795 aa15.1■□□□□ 0.01
RAB5C-206ENST00000550406 SNX21Q969T3 373 aa15.1■□□□□ 0.01
RAB5C-206ENST00000550406 AMNQ9BXJ7 453 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms