RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 OPLAHO14841 1288 aa13.47□□□□□ -0.25
VDR-208ENST00000550325 MSL1Q68DK7 614 aa13.47□□□□□ -0.25
VDR-208ENST00000550325 PNMA8AQ86V59 439 aaPredicted RBP13.47□□□□□ -0.25
VDR-208ENST00000550325 HELBQ8NG08 1087 aaPredicted RBP13.47□□□□□ -0.25
VDR-208ENST00000550325 SLC52A2Q9HAB3 445 aa13.47□□□□□ -0.25
VDR-208ENST00000550325 MCM8Q9UJA3 840 aa13.47□□□□□ -0.25
VDR-208ENST00000550325 XDHP47989 1333 aa13.47□□□□□ -0.25
VDR-208ENST00000550325 MBD4O95243 580 aa13.47□□□□□ -0.25
VDR-208ENST00000550325 TMOD1P28289 359 aa13.47□□□□□ -0.25
VDR-208ENST00000550325 TTC38Q5R3I4 469 aa13.47□□□□□ -0.25
VDR-208ENST00000550325 EMBQ6PCB8 327 aa13.47□□□□□ -0.25
VDR-208ENST00000550325 PIK3AP1Q6ZUJ8 805 aa13.47□□□□□ -0.25
VDR-208ENST00000550325 CPLX4Q7Z7G2 160 aa13.47□□□□□ -0.25
VDR-208ENST00000550325 CREG2Q8IUH2 290 aa13.47□□□□□ -0.25
VDR-208ENST00000550325 IFT20Q8IY31 132 aa13.47□□□□□ -0.25
VDR-208ENST00000550325 CSGALNACT2Q8N6G5 542 aa13.47□□□□□ -0.25
VDR-208ENST00000550325 TRIM58Q8NG06 486 aa13.47□□□□□ -0.25
VDR-208ENST00000550325 PLBD2Q8NHP8 589 aa13.47□□□□□ -0.25
VDR-208ENST00000550325 KRT12Q99456 494 aa13.47□□□□□ -0.25
VDR-208ENST00000550325 PTPRUQ92729 1446 aa13.47□□□□□ -0.25
VDR-208ENST00000550325 EIF4E1BA6NMX2 242 aaKnown RBP13.46□□□□□ -0.25
VDR-208ENST00000550325 GCKP35557 465 aa13.46□□□□□ -0.25
VDR-208ENST00000550325 BIRC2Q13490 618 aa13.46□□□□□ -0.25
VDR-208ENST00000550325 CRACR2BQ8N4Y2 399 aaPredicted RBP13.46□□□□□ -0.25
VDR-208ENST00000550325 FAM89AQ96GI7 184 aa13.46□□□□□ -0.25
VDR-208ENST00000550325 PRKAB2O43741 272 aa13.46□□□□□ -0.25
VDR-208ENST00000550325 MCAMP43121 646 aa13.46□□□□□ -0.25
VDR-208ENST00000550325 PMS1P54277 932 aaKnown RBP13.46□□□□□ -0.25
VDR-208ENST00000550325 TCIRG1Q13488 830 aa13.46□□□□□ -0.25
VDR-208ENST00000550325 CYB5D1Q6P9G0 228 aa13.46□□□□□ -0.25
VDR-208ENST00000550325 TMC4Q7Z404 712 aa13.46□□□□□ -0.25
VDR-208ENST00000550325 SPATS2Q86XZ4 545 aaKnown RBP13.46□□□□□ -0.25
VDR-208ENST00000550325 SPATA20Q8TB22 786 aa13.46□□□□□ -0.25
VDR-208ENST00000550325 TUBGCP2Q9BSJ2 902 aa13.46□□□□□ -0.25
VDR-208ENST00000550325 NOC4LQ9BVI4 516 aaKnown RBP13.46□□□□□ -0.25
VDR-208ENST00000550325 TRIM6Q9C030 488 aaPredicted RBP13.46□□□□□ -0.25
VDR-208ENST00000550325 DDX20Q9UHI6 824 aaKnown RBP13.46□□□□□ -0.25
VDR-208ENST00000550325 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.46□□□□□ -0.25
VDR-208ENST00000550325 ANKRD18BA2A2Z9 1011 aa13.46□□□□□ -0.26
VDR-208ENST00000550325 GCFC2P16383 781 aaKnown RBP13.46□□□□□ -0.26
VDR-208ENST00000550325 TATP17735 454 aaPredicted RBP13.46□□□□□ -0.26
VDR-208ENST00000550325 CDC25CP30307 473 aa13.46□□□□□ -0.26
VDR-208ENST00000550325 CABP4P57796 275 aa13.46□□□□□ -0.26
VDR-208ENST00000550325 PREPLQ4J6C6 727 aaPredicted RBP13.46□□□□□ -0.26
VDR-208ENST00000550325 HAUS3Q68CZ6 603 aa13.46□□□□□ -0.26
VDR-208ENST00000550325 LDHAL6AQ6ZMR3 332 aa13.46□□□□□ -0.26
VDR-208ENST00000550325 TOM1L2Q6ZVM7 507 aa13.46□□□□□ -0.26
VDR-208ENST00000550325 MIGA1Q8NAN2 632 aa13.46□□□□□ -0.26
VDR-208ENST00000550325 PIH1D3Q9NQM4 214 aaKnown RBP13.46□□□□□ -0.26
VDR-208ENST00000550325 HYOU1Q9Y4L1 999 aa13.46□□□□□ -0.26
VDR-208ENST00000550325 TMEM2Q9UHN6 1383 aa13.46□□□□□ -0.26
VDR-208ENST00000550325 ZNF233A6NK53 670 aa13.45□□□□□ -0.26
VDR-208ENST00000550325 LGALS16A8MUM7 142 aa13.45□□□□□ -0.26
VDR-208ENST00000550325 BUB1BO60566 1050 aaPredicted RBP13.45□□□□□ -0.26
VDR-208ENST00000550325 GLI1P08151 1106 aa13.45□□□□□ -0.26
VDR-208ENST00000550325 MDH1P40925 334 aaKnown RBP13.45□□□□□ -0.26
VDR-208ENST00000550325 SMTNP53814 917 aa13.45□□□□□ -0.26
VDR-208ENST00000550325 PPP1R7Q15435 360 aa13.45□□□□□ -0.26
VDR-208ENST00000550325 CCDC178Q5BJE1 867 aa13.45□□□□□ -0.26
VDR-208ENST00000550325 ELOA2Q8IYF1 753 aaPredicted RBP13.45□□□□□ -0.26
VDR-208ENST00000550325 FANCBQ8NB91 859 aa13.45□□□□□ -0.26
VDR-208ENST00000550325 TANGO6Q9C0B7 1094 aa13.45□□□□□ -0.26
VDR-208ENST00000550325 EXOC1Q9NV70 894 aa13.45□□□□□ -0.26
VDR-208ENST00000550325 PLAAQ9Y263 795 aa13.45□□□□□ -0.26
VDR-208ENST00000550325 OVOS2A0A0G2JMS6 1433 aa13.45□□□□□ -0.26
VDR-208ENST00000550325 RASSF7Q02833 373 aa13.45□□□□□ -0.26
VDR-208ENST00000550325 ARID5AQ03989 594 aa13.45□□□□□ -0.26
VDR-208ENST00000550325 TRADDQ15628 312 aa13.45□□□□□ -0.26
VDR-208ENST00000550325 MAGEB6Q8N7X4 407 aa13.45□□□□□ -0.26
VDR-208ENST00000550325 CYFIP2Q96F07 1278 aa13.45□□□□□ -0.26
VDR-208ENST00000550325 THOC1Q96FV9 657 aaKnown RBP13.45□□□□□ -0.26
VDR-208ENST00000550325 CAPN11Q9UMQ6 739 aa13.45□□□□□ -0.26
VDR-208ENST00000550325 PACSIN2Q9UNF0 486 aaPredicted RBP13.45□□□□□ -0.26
VDR-208ENST00000550325 H7C1D1 291 aa13.45□□□□□ -0.26
VDR-208ENST00000550325 PSMA7O14818 248 aa13.45□□□□□ -0.26
VDR-208ENST00000550325 PAK2Q13177 524 aa13.45□□□□□ -0.26
VDR-208ENST00000550325 IFIT5Q13325 482 aaKnown RBP13.45□□□□□ -0.26
VDR-208ENST00000550325 ZNF658Q5TYW1 1059 aaPredicted RBP13.45□□□□□ -0.26
VDR-208ENST00000550325 TEX11Q8IYF3 940 aa13.45□□□□□ -0.26
VDR-208ENST00000550325 ZNF654Q8IZM8 581 aa13.45□□□□□ -0.26
VDR-208ENST00000550325 TCP11Q8WWU5 503 aa13.45□□□□□ -0.26
VDR-208ENST00000550325 GPR108Q9NPR9 543 aa13.45□□□□□ -0.26
VDR-208ENST00000550325 FAM170AA1A519 330 aa13.45□□□□□ -0.26
VDR-208ENST00000550325 ANO9A1A5B4 782 aa13.45□□□□□ -0.26
VDR-208ENST00000550325 A6NNZ2 444 aa13.45□□□□□ -0.26
VDR-208ENST00000550325 CLTAP09496 248 aa13.45□□□□□ -0.26
VDR-208ENST00000550325 BRD2P25440 801 aaKnown RBP13.45□□□□□ -0.26
VDR-208ENST00000550325 ADD2P35612 726 aa13.45□□□□□ -0.26
VDR-208ENST00000550325 MAGEA1P43355 309 aa13.45□□□□□ -0.26
VDR-208ENST00000550325 SARNPP82979 210 aaKnown RBP13.45□□□□□ -0.26
VDR-208ENST00000550325 SKOR1P84550 965 aa13.45□□□□□ -0.26
VDR-208ENST00000550325 TUBB8Q3ZCM7 444 aa13.45□□□□□ -0.26
VDR-208ENST00000550325 HIBCHQ6NVY1 386 aaPredicted RBP13.45□□□□□ -0.26
VDR-208ENST00000550325 FNBP4Q8N3X1 1017 aaPredicted RBP13.45□□□□□ -0.26
VDR-208ENST00000550325 MMGT1Q8N4V1 131 aa13.45□□□□□ -0.26
VDR-208ENST00000550325 UBLCP1Q8WVY7 318 aaPredicted RBP13.45□□□□□ -0.26
VDR-208ENST00000550325 RMND1Q9NWS8 449 aa13.45□□□□□ -0.26
VDR-208ENST00000550325 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.44□□□□□ -0.26
VDR-208ENST00000550325 NWD1Q149M9 1564 aa13.44□□□□□ -0.26
VDR-208ENST00000550325 TECPR2O15040 1411 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms