RNA–Protein interactions for RNA: ENST00000550144.1

CTDSP2-206, Transcript of CTD small phosphatase 2, humanhuman

TSL 4

Gene CTDSP2, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-206ENST00000550144 SLF1Q9BQI6 1058 aa13.26□□□□□ -0.29
CTDSP2-206ENST00000550144 AMNQ9BXJ7 453 aa13.26□□□□□ -0.29
CTDSP2-206ENST00000550144 RPAP3Q9H6T3 665 aaPredicted RBP13.26□□□□□ -0.29
CTDSP2-206ENST00000550144 GBA2Q9HCG7 927 aaPredicted RBP13.26□□□□□ -0.29
CTDSP2-206ENST00000550144 BAZ2BQ9UIF8 2168 aaKnown RBP13.26□□□□□ -0.29
CTDSP2-206ENST00000550144 CFAP45Q9UL16 551 aa13.26□□□□□ -0.29
CTDSP2-206ENST00000550144 PCDHA4Q9UN74 947 aa13.26□□□□□ -0.29
CTDSP2-206ENST00000550144 CNPY2Q9Y2B0 182 aa13.26□□□□□ -0.29
CTDSP2-206ENST00000550144 ESYT2A0FGR8 921 aa13.25□□□□□ -0.29
CTDSP2-206ENST00000550144 SMCO2A6NFE2 343 aa13.25□□□□□ -0.29
CTDSP2-206ENST00000550144 CXCL11O14625 94 aa13.25□□□□□ -0.29
CTDSP2-206ENST00000550144 PPP1R11O60927 126 aaPredicted RBP13.25□□□□□ -0.29
CTDSP2-206ENST00000550144 FLOT1O75955 427 aa13.25□□□□□ -0.29
CTDSP2-206ENST00000550144 SNAP25P60880 206 aa13.25□□□□□ -0.29
CTDSP2-206ENST00000550144 NR5A1Q13285 461 aa13.25□□□□□ -0.29
CTDSP2-206ENST00000550144 PPIL2Q13356 520 aa13.25□□□□□ -0.29
CTDSP2-206ENST00000550144 NPY5RQ15761 445 aa13.25□□□□□ -0.29
CTDSP2-206ENST00000550144 MYSM1Q5VVJ2 828 aa13.25□□□□□ -0.29
CTDSP2-206ENST00000550144 SAMD1Q6SPF0 538 aaPredicted RBP13.25□□□□□ -0.29
CTDSP2-206ENST00000550144 FBXO11Q86XK2 927 aa13.25□□□□□ -0.29
CTDSP2-206ENST00000550144 PRPF38AQ8NAV1 312 aaKnown RBP13.25□□□□□ -0.29
CTDSP2-206ENST00000550144 BICD2Q8TD16 824 aa13.25□□□□□ -0.29
CTDSP2-206ENST00000550144 CNKSR2Q8WXI2 1034 aa13.25□□□□□ -0.29
CTDSP2-206ENST00000550144 OPTNQ96CV9 577 aa13.25□□□□□ -0.29
CTDSP2-206ENST00000550144 ZMYND12Q9H0C1 365 aa13.25□□□□□ -0.29
CTDSP2-206ENST00000550144 RANBP17Q9H2T7 1088 aaKnown RBP13.25□□□□□ -0.29
CTDSP2-206ENST00000550144 FBXO28Q9NVF7 368 aa13.25□□□□□ -0.29
CTDSP2-206ENST00000550144 PCDHA1Q9Y5I3 950 aa13.25□□□□□ -0.29
CTDSP2-206ENST00000550144 IRF6O14896 467 aa13.24□□□□□ -0.29
CTDSP2-206ENST00000550144 FIBPO43427 364 aa13.24□□□□□ -0.29
CTDSP2-206ENST00000550144 ITGBL1O95965 494 aaPredicted RBP13.24□□□□□ -0.29
CTDSP2-206ENST00000550144 ADCY7P51828 1080 aa13.24□□□□□ -0.29
CTDSP2-206ENST00000550144 SCAND2PQ9GZW5 306 aaPredicted RBP13.24□□□□□ -0.29
CTDSP2-206ENST00000550144 GLT8D2Q9H1C3 349 aa13.24□□□□□ -0.29
CTDSP2-206ENST00000550144 TFIP11Q9UBB9 837 aaKnown RBP13.24□□□□□ -0.29
CTDSP2-206ENST00000550144 PPP1R9AQ9ULJ8 1098 aa13.24□□□□□ -0.29
CTDSP2-206ENST00000550144 KCNH4Q9UQ05 1017 aa13.24□□□□□ -0.29
CTDSP2-206ENST00000550144 A0A0G2JLL6 359 aaPredicted RBP13.23□□□□□ -0.29
CTDSP2-206ENST00000550144 USP17L15C9J2P7 530 aa13.23□□□□□ -0.29
CTDSP2-206ENST00000550144 USP17L13C9JLJ4 530 aa13.23□□□□□ -0.29
CTDSP2-206ENST00000550144 USP17L11C9JVI0 530 aa13.23□□□□□ -0.29
CTDSP2-206ENST00000550144 USP17L18D6R9N7 530 aa13.23□□□□□ -0.29
CTDSP2-206ENST00000550144 USP17L22D6RA61 530 aa13.23□□□□□ -0.29
CTDSP2-206ENST00000550144 USP17L17D6RBQ6 530 aa13.23□□□□□ -0.29
CTDSP2-206ENST00000550144 USP17L19D6RCP7 530 aa13.23□□□□□ -0.29
CTDSP2-206ENST00000550144 USP17L20D6RJB6 530 aa13.23□□□□□ -0.29
CTDSP2-206ENST00000550144 PRPF40AO75400 957 aaKnown RBP13.23□□□□□ -0.29
CTDSP2-206ENST00000550144 FDX1P10109 184 aa13.23□□□□□ -0.29
CTDSP2-206ENST00000550144 MRPL12P52815 198 aaKnown RBP13.23□□□□□ -0.29
CTDSP2-206ENST00000550144 USP17L24Q0WX57 530 aa13.23□□□□□ -0.29
CTDSP2-206ENST00000550144 RILPL1Q5EBL4 403 aa13.23□□□□□ -0.29
CTDSP2-206ENST00000550144 CCDC174Q6PII3 467 aa13.23□□□□□ -0.29
CTDSP2-206ENST00000550144 PRRT2Q7Z6L0 340 aaPredicted RBP13.23□□□□□ -0.29
CTDSP2-206ENST00000550144 TNS4Q8IZW8 715 aa13.23□□□□□ -0.29
CTDSP2-206ENST00000550144 TNFRSF25Q93038 417 aa13.23□□□□□ -0.29
CTDSP2-206ENST00000550144 SPATA32Q96LK8 384 aa13.23□□□□□ -0.29
CTDSP2-206ENST00000550144 GDPD2Q9HCC8 539 aa13.23□□□□□ -0.29
CTDSP2-206ENST00000550144 RIC8AQ9NPQ8 531 aa13.23□□□□□ -0.29
CTDSP2-206ENST00000550144 NOL7Q9UMY1 257 aaKnown RBP13.23□□□□□ -0.29
CTDSP2-206ENST00000550144 CTDP1Q9Y5B0 961 aaPredicted RBP13.23□□□□□ -0.29
CTDSP2-206ENST00000550144 MYH15Q9Y2K3 1946 aa13.23□□□□□ -0.29
CTDSP2-206ENST00000550144 CCDC194A0A1B0GVG4 234 aa13.22□□□□□ -0.29
CTDSP2-206ENST00000550144 ZBED4O75132 1171 aa13.22□□□□□ -0.29
CTDSP2-206ENST00000550144 CEBPZQ03701 1054 aaKnown RBP13.22□□□□□ -0.29
CTDSP2-206ENST00000550144 COG2Q14746 738 aa13.22□□□□□ -0.29
CTDSP2-206ENST00000550144 USH1GQ495M9 461 aa13.22□□□□□ -0.29
CTDSP2-206ENST00000550144 GADL1Q6ZQY3 521 aa13.22□□□□□ -0.29
CTDSP2-206ENST00000550144 CATSPERGQ6ZRH7 1159 aa13.22□□□□□ -0.29
CTDSP2-206ENST00000550144 REXO1Q8N1G1 1221 aaKnown RBP13.22□□□□□ -0.29
CTDSP2-206ENST00000550144 TMEM87AQ8NBN3 555 aa13.22□□□□□ -0.29
CTDSP2-206ENST00000550144 PROCA1Q8NCQ7 364 aaPredicted RBP13.22□□□□□ -0.29
CTDSP2-206ENST00000550144 CUL5Q93034 780 aa13.22□□□□□ -0.29
CTDSP2-206ENST00000550144 USP28Q96RU2 1077 aa13.22□□□□□ -0.29
CTDSP2-206ENST00000550144 PSTPIP2Q9H939 334 aa13.22□□□□□ -0.29
CTDSP2-206ENST00000550144 RTEL1Q9NZ71 1219 aa13.22□□□□□ -0.29
CTDSP2-206ENST00000550144 PNMA2Q9UL42 364 aa13.22□□□□□ -0.29
CTDSP2-206ENST00000550144 PCDHA6Q9UN73 950 aa13.22□□□□□ -0.29
CTDSP2-206ENST00000550144 PCDHA8Q9Y5H6 950 aa13.22□□□□□ -0.29
CTDSP2-206ENST00000550144 MYPNQ86TC9 1320 aa13.21□□□□□ -0.29
CTDSP2-206ENST00000550144 M0R2N6 131 aa13.21□□□□□ -0.29
CTDSP2-206ENST00000550144 ICAM1P05362 532 aa13.21□□□□□ -0.29
CTDSP2-206ENST00000550144 DSG3P32926 999 aa13.21□□□□□ -0.29
CTDSP2-206ENST00000550144 SNAPC2Q13487 334 aa13.21□□□□□ -0.29
CTDSP2-206ENST00000550144 NBR1Q14596 966 aa13.21□□□□□ -0.29
CTDSP2-206ENST00000550144 CST9Q5W186 159 aa13.21□□□□□ -0.29
CTDSP2-206ENST00000550144 ANO1Q5XXA6 986 aa13.21□□□□□ -0.29
CTDSP2-206ENST00000550144 PIK3AP1Q6ZUJ8 805 aa13.21□□□□□ -0.29
CTDSP2-206ENST00000550144 FASTKD5Q7L8L6 764 aaKnown RBP13.21□□□□□ -0.29
CTDSP2-206ENST00000550144 KRT25Q7Z3Z0 450 aa13.21□□□□□ -0.29
CTDSP2-206ENST00000550144 LEO1Q8WVC0 666 aaPredicted RBP13.21□□□□□ -0.29
CTDSP2-206ENST00000550144 SLC38A10Q9HBR0 1119 aa13.21□□□□□ -0.29
CTDSP2-206ENST00000550144 LMBRD1Q9NUN5 540 aa13.21□□□□□ -0.29
CTDSP2-206ENST00000550144 POLR3EQ9NVU0 708 aa13.21□□□□□ -0.29
CTDSP2-206ENST00000550144 HOXC10Q9NYD6 342 aa13.21□□□□□ -0.29
CTDSP2-206ENST00000550144 LOC285556D6RIA3 1793 aa13.2□□□□□ -0.3
CTDSP2-206ENST00000550144 ELP1O95163 1332 aa13.2□□□□□ -0.3
CTDSP2-206ENST00000550144 ABCB11O95342 1321 aa13.2□□□□□ -0.3
CTDSP2-206ENST00000550144 FAM205CA6NFA0 338 aa13.2□□□□□ -0.3
CTDSP2-206ENST00000550144 VWA5AO00534 786 aa13.2□□□□□ -0.3
CTDSP2-206ENST00000550144 ADAMTS3O15072 1205 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms