RNA–Protein interactions for RNA: ENST00000550103.2

EFCAB11-203, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 647 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-203ENST00000550103 CCDC155Q8N6L0 562 aa8.4□□□□□ -1.06
EFCAB11-203ENST00000550103 FBXO27Q8NI29 283 aa8.4□□□□□ -1.06
EFCAB11-203ENST00000550103 GPATCH3Q96I76 525 aa8.4□□□□□ -1.06
EFCAB11-203ENST00000550103 SPON1Q9HCB6 807 aa8.4□□□□□ -1.06
EFCAB11-203ENST00000550103 HYPKQ9NX55 129 aa8.4□□□□□ -1.06
EFCAB11-203ENST00000550103 PRR12Q9ULL5 1215 aa8.4□□□□□ -1.06
EFCAB11-203ENST00000550103 ZNRF3Q9ULT6 936 aa8.4□□□□□ -1.06
EFCAB11-203ENST00000550103 HDAC5Q9UQL6 1122 aa8.4□□□□□ -1.06
EFCAB11-203ENST00000550103 NOP58Q9Y2X3 529 aaKnown RBP8.4□□□□□ -1.06
EFCAB11-203ENST00000550103 SPEF2Q9C093 1822 aa8.4□□□□□ -1.07
EFCAB11-203ENST00000550103 MYH3P11055 1940 aa8.39□□□□□ -1.07
EFCAB11-203ENST00000550103 CNTNAP4Q9C0A0 1308 aa8.39□□□□□ -1.07
EFCAB11-203ENST00000550103 TCERG1O14776 1098 aaKnown RBP8.39□□□□□ -1.07
EFCAB11-203ENST00000550103 EIF4EBP3O60516 100 aaPredicted RBP8.39□□□□□ -1.07
EFCAB11-203ENST00000550103 SNRPA1P09661 255 aaKnown RBP8.39□□□□□ -1.07
EFCAB11-203ENST00000550103 PTPRAP18433 802 aa8.39□□□□□ -1.07
EFCAB11-203ENST00000550103 ZNF157P51786 506 aaPredicted RBP8.39□□□□□ -1.07
EFCAB11-203ENST00000550103 CASP7P55210 303 aa8.39□□□□□ -1.07
EFCAB11-203ENST00000550103 ANAPC15P60006 121 aa8.39□□□□□ -1.07
EFCAB11-203ENST00000550103 RASGRF1Q13972 1273 aa8.39□□□□□ -1.07
EFCAB11-203ENST00000550103 KRT24Q2M2I5 525 aa8.39□□□□□ -1.07
EFCAB11-203ENST00000550103 PKDCCQ504Y2 493 aa8.39□□□□□ -1.07
EFCAB11-203ENST00000550103 MSL1Q68DK7 614 aa8.39□□□□□ -1.07
EFCAB11-203ENST00000550103 FOXR1Q6PIV2 292 aa8.39□□□□□ -1.07
EFCAB11-203ENST00000550103 HFE2Q6ZVN8 426 aa8.39□□□□□ -1.07
EFCAB11-203ENST00000550103 SMIM5Q71RC9 77 aa8.39□□□□□ -1.07
EFCAB11-203ENST00000550103 SULF2Q8IWU5 870 aa8.39□□□□□ -1.07
EFCAB11-203ENST00000550103 MICALL1Q8N3F8 863 aa8.39□□□□□ -1.07
EFCAB11-203ENST00000550103 APPBP2Q92624 585 aa8.39□□□□□ -1.07
EFCAB11-203ENST00000550103 UBE2OQ9C0C9 1292 aaKnown RBP8.39□□□□□ -1.07
EFCAB11-203ENST00000550103 ADAM19Q9H013 955 aa8.39□□□□□ -1.07
EFCAB11-203ENST00000550103 MTFR1LQ9H019 292 aa8.39□□□□□ -1.07
EFCAB11-203ENST00000550103 EHMT1Q9H9B1 1298 aa8.39□□□□□ -1.07
EFCAB11-203ENST00000550103 BRMS1Q9HCU9 246 aa8.39□□□□□ -1.07
EFCAB11-203ENST00000550103 DNAJB12Q9NXW2 375 aaKnown RBP8.39□□□□□ -1.07
EFCAB11-203ENST00000550103 COL15A1P39059 1388 aa8.38□□□□□ -1.07
EFCAB11-203ENST00000550103 CCDC85CA6NKD9 419 aa8.38□□□□□ -1.07
EFCAB11-203ENST00000550103 FAM177BA6PVY3 158 aa8.38□□□□□ -1.07
EFCAB11-203ENST00000550103 PDPK1O15530 556 aa8.38□□□□□ -1.07
EFCAB11-203ENST00000550103 SIN3BO75182 1162 aa8.38□□□□□ -1.07
EFCAB11-203ENST00000550103 CDC45O75419 566 aa8.38□□□□□ -1.07
EFCAB11-203ENST00000550103 EIF2AK2P19525 551 aaKnown RBP8.38□□□□□ -1.07
EFCAB11-203ENST00000550103 HMGB2P26583 209 aaKnown RBP8.38□□□□□ -1.07
EFCAB11-203ENST00000550103 MLLT1Q03111 559 aaPredicted RBP8.38□□□□□ -1.07
EFCAB11-203ENST00000550103 HDAC1Q13547 482 aaPredicted RBP8.38□□□□□ -1.07
EFCAB11-203ENST00000550103 ARSHQ5FYA8 562 aa8.38□□□□□ -1.07
EFCAB11-203ENST00000550103 TAF7LQ5H9L4 462 aa8.38□□□□□ -1.07
EFCAB11-203ENST00000550103 AMIGO3Q86WK7 504 aa8.38□□□□□ -1.07
EFCAB11-203ENST00000550103 COL23A1Q86Y22 540 aaPredicted RBP8.38□□□□□ -1.07
EFCAB11-203ENST00000550103 DNAJC10Q8IXB1 793 aa8.38□□□□□ -1.07
EFCAB11-203ENST00000550103 CELF2-AS1Q8N7Q2 184 aa8.38□□□□□ -1.07
EFCAB11-203ENST00000550103 FAM169BQ8N8A8 192 aa8.38□□□□□ -1.07
EFCAB11-203ENST00000550103 SH3TC2Q8TF17 1288 aa8.38□□□□□ -1.07
EFCAB11-203ENST00000550103 ZNF837Q96EG3 531 aaPredicted RBP8.38□□□□□ -1.07
EFCAB11-203ENST00000550103 TRERF1Q96PN7 1200 aa8.38□□□□□ -1.07
EFCAB11-203ENST00000550103 DNAJC7Q99615 494 aa8.38□□□□□ -1.07
EFCAB11-203ENST00000550103 TEX13AQ9BXU3 409 aaPredicted RBP8.38□□□□□ -1.07
EFCAB11-203ENST00000550103 IGFLR1Q9H665 355 aa8.38□□□□□ -1.07
EFCAB11-203ENST00000550103 SPC25Q9HBM1 224 aa8.38□□□□□ -1.07
EFCAB11-203ENST00000550103 ZBTB40Q9NUA8 1239 aa8.38□□□□□ -1.07
EFCAB11-203ENST00000550103 SOX13Q9UN79 622 aa8.38□□□□□ -1.07
EFCAB11-203ENST00000550103 IBTKQ9P2D0 1353 aaPredicted RBP8.37□□□□□ -1.07
EFCAB11-203ENST00000550103 TNRC6CQ9HCJ0 1690 aaKnown RBP8.37□□□□□ -1.07
EFCAB11-203ENST00000550103 DNAJC6O75061 913 aa8.37□□□□□ -1.07
EFCAB11-203ENST00000550103 ATE1O95260 518 aa8.37□□□□□ -1.07
EFCAB11-203ENST00000550103 GNAI3P08754 354 aa8.37□□□□□ -1.07
EFCAB11-203ENST00000550103 CRKLP46109 303 aaKnown RBP8.37□□□□□ -1.07
EFCAB11-203ENST00000550103 RPL6Q02878 288 aaKnown RBP8.37□□□□□ -1.07
EFCAB11-203ENST00000550103 SEPT6Q14141 434 aa8.37□□□□□ -1.07
EFCAB11-203ENST00000550103 ZNF423Q2M1K9 1284 aa8.37□□□□□ -1.07
EFCAB11-203ENST00000550103 GK5Q6ZS86 529 aa8.37□□□□□ -1.07
EFCAB11-203ENST00000550103 HOMER1Q86YM7 354 aa8.37□□□□□ -1.07
EFCAB11-203ENST00000550103 CACTIN-AS1Q8N1I8 211 aa8.37□□□□□ -1.07
EFCAB11-203ENST00000550103 GTPBP3Q969Y2 492 aaKnown RBP8.37□□□□□ -1.07
EFCAB11-203ENST00000550103 ATP13A2Q9NQ11 1180 aa8.37□□□□□ -1.07
EFCAB11-203ENST00000550103 DDX21Q9NR30 783 aaKnown RBP eCLIP8.37□□□□□ -1.07
EFCAB11-203ENST00000550103 TIAM2Q8IVF5 1701 aa8.37□□□□□ -1.07
EFCAB11-203ENST00000550103 ATP10DQ9P241 1426 aa8.37□□□□□ -1.07
EFCAB11-203ENST00000550103 KCNQ3O43525 872 aa8.36□□□□□ -1.07
EFCAB11-203ENST00000550103 HMMRO75330 724 aa8.36□□□□□ -1.07
EFCAB11-203ENST00000550103 EIF2S2P20042 333 aaKnown RBP8.36□□□□□ -1.07
EFCAB11-203ENST00000550103 ITGA6P23229 1130 aa8.36□□□□□ -1.07
EFCAB11-203ENST00000550103 POLD1P28340 1107 aa8.36□□□□□ -1.07
EFCAB11-203ENST00000550103 CLCQ05315 142 aa8.36□□□□□ -1.07
EFCAB11-203ENST00000550103 LRRFIP1Q32MZ4 808 aaKnown RBP8.36□□□□□ -1.07
EFCAB11-203ENST00000550103 RASIP1Q5U651 963 aa8.36□□□□□ -1.07
EFCAB11-203ENST00000550103 VN1R5Q7Z5H4 357 aa8.36□□□□□ -1.07
EFCAB11-203ENST00000550103 FILIP1Q7Z7B0 1213 aa8.36□□□□□ -1.07
EFCAB11-203ENST00000550103 SYT9Q86SS6 491 aa8.36□□□□□ -1.07
EFCAB11-203ENST00000550103 RPAP2Q8IXW5 612 aaPredicted RBP8.36□□□□□ -1.07
EFCAB11-203ENST00000550103 LILRB2Q8N423 598 aa8.36□□□□□ -1.07
EFCAB11-203ENST00000550103 C19orf47Q8N9M1 422 aaKnown RBP8.36□□□□□ -1.07
EFCAB11-203ENST00000550103 FLAD1Q8NFF5 587 aa8.36□□□□□ -1.07
EFCAB11-203ENST00000550103 PLD4Q96BZ4 506 aa8.36□□□□□ -1.07
EFCAB11-203ENST00000550103 GCC1Q96CN9 775 aa8.36□□□□□ -1.07
EFCAB11-203ENST00000550103 ZNF496Q96IT1 587 aaPredicted RBP8.36□□□□□ -1.07
EFCAB11-203ENST00000550103 CBX8Q9HC52 389 aa8.36□□□□□ -1.07
EFCAB11-203ENST00000550103 METTL14Q9HCE5 456 aaKnown RBP8.36□□□□□ -1.07
EFCAB11-203ENST00000550103 AVENQ9NQS1 362 aaPredicted RBP8.36□□□□□ -1.07
EFCAB11-203ENST00000550103 ST7Q9NRC1 585 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms