RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 FEM1BQ9UK73 627 aa11.79□□□□□ -0.52
TRAFD1-207ENST00000550051 COG6Q9Y2V7 657 aa11.79□□□□□ -0.52
TRAFD1-207ENST00000550051 MYH4Q9Y623 1939 aa11.78□□□□□ -0.52
TRAFD1-207ENST00000550051 SPTBN5Q9NRC6 3674 aaKnown RBP11.78□□□□□ -0.52
TRAFD1-207ENST00000550051 MCM3APO60318 1980 aa11.78□□□□□ -0.52
TRAFD1-207ENST00000550051 MYADML2A6NDP7 307 aa11.78□□□□□ -0.52
TRAFD1-207ENST00000550051 ARVCFO00192 962 aa11.78□□□□□ -0.52
TRAFD1-207ENST00000550051 RAD21O60216 631 aa11.78□□□□□ -0.52
TRAFD1-207ENST00000550051 FDX1P10109 184 aa11.78□□□□□ -0.52
TRAFD1-207ENST00000550051 PPIGQ13427 754 aaKnown RBP eCLIP11.78□□□□□ -0.52
TRAFD1-207ENST00000550051 CCDC144BQ3MJ40 725 aa11.78□□□□□ -0.52
TRAFD1-207ENST00000550051 GNASQ5JWF2 1037 aa11.78□□□□□ -0.52
TRAFD1-207ENST00000550051 TMEM240Q5SV17 173 aa11.78□□□□□ -0.52
TRAFD1-207ENST00000550051 CPXCR1Q8N123 301 aa11.78□□□□□ -0.52
TRAFD1-207ENST00000550051 CHST13Q8NET6 341 aa11.78□□□□□ -0.52
TRAFD1-207ENST00000550051 TIFAQ96CG3 184 aa11.78□□□□□ -0.52
TRAFD1-207ENST00000550051 FGD4Q96M96 766 aa11.78□□□□□ -0.52
TRAFD1-207ENST00000550051 LRRCC1Q9C099 1032 aa11.78□□□□□ -0.52
TRAFD1-207ENST00000550051 ZNF287Q9HBT7 754 aa11.78□□□□□ -0.52
TRAFD1-207ENST00000550051 MINDY4BA8MYZ0 360 aa11.77□□□□□ -0.53
TRAFD1-207ENST00000550051 CTAGE5O15320 804 aa11.77□□□□□ -0.53
TRAFD1-207ENST00000550051 CD4P01730 458 aa11.77□□□□□ -0.53
TRAFD1-207ENST00000550051 C6orf222P0C671 652 aaPredicted RBP11.77□□□□□ -0.53
TRAFD1-207ENST00000550051 NUBP1P53384 320 aa11.77□□□□□ -0.53
TRAFD1-207ENST00000550051 IRX5P78411 483 aaPredicted RBP11.77□□□□□ -0.53
TRAFD1-207ENST00000550051 TJAP1Q5JTD0 557 aa11.77□□□□□ -0.53
TRAFD1-207ENST00000550051 FAM126BQ8IXS8 530 aa11.77□□□□□ -0.53
TRAFD1-207ENST00000550051 ZNF444Q8N0Y2 327 aaPredicted RBP11.77□□□□□ -0.53
TRAFD1-207ENST00000550051 ANKRD35Q8N283 1001 aa11.77□□□□□ -0.53
TRAFD1-207ENST00000550051 TMEM199Q8N511 208 aa11.77□□□□□ -0.53
TRAFD1-207ENST00000550051 KBTBD3Q8NAB2 608 aa11.77□□□□□ -0.53
TRAFD1-207ENST00000550051 SLC43A3Q8NBI5 491 aa11.77□□□□□ -0.53
TRAFD1-207ENST00000550051 GMCL1P1Q8NEA9 526 aa11.77□□□□□ -0.53
TRAFD1-207ENST00000550051 OSBP2Q969R2 916 aa11.77□□□□□ -0.53
TRAFD1-207ENST00000550051 KATNBL1Q9H079 304 aa11.77□□□□□ -0.53
TRAFD1-207ENST00000550051 BCL11AQ9H165 835 aa11.77□□□□□ -0.53
TRAFD1-207ENST00000550051 RAVER2Q9HCJ3 691 aaKnown RBP11.77□□□□□ -0.53
TRAFD1-207ENST00000550051 ECHDC1Q9NTX5 307 aa11.77□□□□□ -0.53
TRAFD1-207ENST00000550051 MTMR4Q9NYA4 1195 aa11.77□□□□□ -0.53
TRAFD1-207ENST00000550051 ZHX1Q9UKY1 873 aaPredicted RBP11.77□□□□□ -0.53
TRAFD1-207ENST00000550051 A0A0U1RQG5 324 aaPredicted RBP11.76□□□□□ -0.53
TRAFD1-207ENST00000550051 TLR3O15455 904 aaKnown RBP11.76□□□□□ -0.53
TRAFD1-207ENST00000550051 ADCY6O43306 1168 aa11.76□□□□□ -0.53
TRAFD1-207ENST00000550051 TTLL1O95922 423 aa11.76□□□□□ -0.53
TRAFD1-207ENST00000550051 ZFYP08048 801 aaPredicted RBP11.76□□□□□ -0.53
TRAFD1-207ENST00000550051 CSF2RAP15509 400 aa11.76□□□□□ -0.53
TRAFD1-207ENST00000550051 GNAT2P19087 354 aa11.76□□□□□ -0.53
TRAFD1-207ENST00000550051 AKNAD1Q5T1N1 836 aa11.76□□□□□ -0.53
TRAFD1-207ENST00000550051 ZNF365Q70YC5 407 aa11.76□□□□□ -0.53
TRAFD1-207ENST00000550051 ATXN2LQ8WWM7 1075 aaKnown RBP11.76□□□□□ -0.53
TRAFD1-207ENST00000550051 APPBP2Q92624 585 aa11.76□□□□□ -0.53
TRAFD1-207ENST00000550051 KIFC2Q96AC6 838 aa11.76□□□□□ -0.53
TRAFD1-207ENST00000550051 VTI1AQ96AJ9 217 aa11.76□□□□□ -0.53
TRAFD1-207ENST00000550051 CEP95Q96GE4 821 aa11.76□□□□□ -0.53
TRAFD1-207ENST00000550051 SEZ6LQ9BYH1 1024 aa11.76□□□□□ -0.53
TRAFD1-207ENST00000550051 CTDP1Q9Y5B0 961 aaPredicted RBP11.76□□□□□ -0.53
TRAFD1-207ENST00000550051 MYO9BQ13459 2157 aa11.75□□□□□ -0.53
TRAFD1-207ENST00000550051 PATL2C9JE40 543 aaKnown RBP11.75□□□□□ -0.53
TRAFD1-207ENST00000550051 RNF113AO15541 343 aaKnown RBP11.75□□□□□ -0.53
TRAFD1-207ENST00000550051 BMP3P12645 472 aa11.75□□□□□ -0.53
TRAFD1-207ENST00000550051 SLC4A3P48751 1232 aa11.75□□□□□ -0.53
TRAFD1-207ENST00000550051 PSRC1Q6PGN9 363 aaPredicted RBP11.75□□□□□ -0.53
TRAFD1-207ENST00000550051 CCDC129Q6ZRS4 1044 aa11.75□□□□□ -0.53
TRAFD1-207ENST00000550051 ARMCX2Q7L311 632 aa11.75□□□□□ -0.53
TRAFD1-207ENST00000550051 CCDC144CPQ8IYA2 1237 aa11.75□□□□□ -0.53
TRAFD1-207ENST00000550051 FAM133AQ8N9E0 248 aa11.75□□□□□ -0.53
TRAFD1-207ENST00000550051 USP38Q8NB14 1042 aa11.75□□□□□ -0.53
TRAFD1-207ENST00000550051 NEDD1Q8NHV4 660 aa11.75□□□□□ -0.53
TRAFD1-207ENST00000550051 HERVK_113Q902F9 699 aa11.75□□□□□ -0.53
TRAFD1-207ENST00000550051 PBX4Q9BYU1 374 aa11.75□□□□□ -0.53
TRAFD1-207ENST00000550051 GRXCR1A8MXD5 290 aa11.74□□□□□ -0.53
TRAFD1-207ENST00000550051 PLA2G6O60733 806 aa11.74□□□□□ -0.53
TRAFD1-207ENST00000550051 CABYRO75952 493 aa11.74□□□□□ -0.53
TRAFD1-207ENST00000550051 PBX2P40425 430 aa11.74□□□□□ -0.53
TRAFD1-207ENST00000550051 CNTN2Q02246 1040 aa11.74□□□□□ -0.53
TRAFD1-207ENST00000550051 TNFAIP2Q03169 654 aa11.74□□□□□ -0.53
TRAFD1-207ENST00000550051 SLFN13Q68D06 897 aa11.74□□□□□ -0.53
TRAFD1-207ENST00000550051 IFNL3Q8IZI9 196 aa11.74□□□□□ -0.53
TRAFD1-207ENST00000550051 STK11IPQ8N1F8 1099 aa11.74□□□□□ -0.53
TRAFD1-207ENST00000550051 CHURC1Q8WUH1 139 aa11.74□□□□□ -0.53
TRAFD1-207ENST00000550051 GAS2L1Q99501 681 aaPredicted RBP11.74□□□□□ -0.53
TRAFD1-207ENST00000550051 IL23AQ9NPF7 189 aa11.74□□□□□ -0.53
TRAFD1-207ENST00000550051 GNEQ9Y223 722 aaKnown RBP11.74□□□□□ -0.53
TRAFD1-207ENST00000550051 Q9Y3F1 56 aa11.74□□□□□ -0.53
TRAFD1-207ENST00000550051 SOWAHBA6NEL2 793 aa11.73□□□□□ -0.53
TRAFD1-207ENST00000550051 ASB14A6NK59 587 aa11.73□□□□□ -0.53
TRAFD1-207ENST00000550051 TNFRSF10AO00220 468 aa11.73□□□□□ -0.53
TRAFD1-207ENST00000550051 ASTN1O14525 1302 aa11.73□□□□□ -0.53
TRAFD1-207ENST00000550051 ZNF536O15090 1300 aa11.73□□□□□ -0.53
TRAFD1-207ENST00000550051 GPAA1O43292 621 aa11.73□□□□□ -0.53
TRAFD1-207ENST00000550051 SMARCA5O60264 1052 aaPredicted RBP11.73□□□□□ -0.53
TRAFD1-207ENST00000550051 FGBP02675 491 aa11.73□□□□□ -0.53
TRAFD1-207ENST00000550051 ACRP10323 421 aa11.73□□□□□ -0.53
TRAFD1-207ENST00000550051 RAB30Q15771 203 aa11.73□□□□□ -0.53
TRAFD1-207ENST00000550051 TKFCQ3LXA3 575 aa11.73□□□□□ -0.53
TRAFD1-207ENST00000550051 IQSEC1Q6DN90 963 aa11.73□□□□□ -0.53
TRAFD1-207ENST00000550051 FAM160B2Q86V87 743 aa11.73□□□□□ -0.53
TRAFD1-207ENST00000550051 STAG1Q8WVM7 1258 aa11.73□□□□□ -0.53
TRAFD1-207ENST00000550051 GMCL1Q96IK5 515 aa11.73□□□□□ -0.53
TRAFD1-207ENST00000550051 DCTPP1Q9H773 170 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms