RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 CST5P28325 142 aaPredicted RBP18.35■□□□□ 0.53
RAB5C-205ENST00000550013 CNTN2Q02246 1040 aa18.35■□□□□ 0.53
RAB5C-205ENST00000550013 ARMCX2Q7L311 632 aa18.35■□□□□ 0.53
RAB5C-205ENST00000550013 CHST13Q8NET6 341 aa18.35■□□□□ 0.53
RAB5C-205ENST00000550013 NEDD1Q8NHV4 660 aa18.35■□□□□ 0.53
RAB5C-205ENST00000550013 UPF3AQ9H1J1 476 aaKnown RBP18.35■□□□□ 0.53
RAB5C-205ENST00000550013 ABHD16BQ9H3Z7 469 aa18.35■□□□□ 0.53
RAB5C-205ENST00000550013 FBXO40Q9UH90 709 aa18.35■□□□□ 0.53
RAB5C-205ENST00000550013 TBX21Q9UL17 535 aa18.35■□□□□ 0.53
RAB5C-205ENST00000550013 ISY1Q9ULR0 285 aaKnown RBP18.35■□□□□ 0.53
RAB5C-205ENST00000550013 TMEM232C9JQI7 657 aa18.34■□□□□ 0.53
RAB5C-205ENST00000550013 TIMP1P01033 207 aa18.34■□□□□ 0.53
RAB5C-205ENST00000550013 ASGR1P07306 291 aa18.34■□□□□ 0.53
RAB5C-205ENST00000550013 TSPY3P0CV98 308 aa18.34■□□□□ 0.53
RAB5C-205ENST00000550013 TSPY8P0CW00 308 aa18.34■□□□□ 0.53
RAB5C-205ENST00000550013 FOSL2P15408 326 aa18.34■□□□□ 0.53
RAB5C-205ENST00000550013 OAZ1P54368 228 aa18.34■□□□□ 0.53
RAB5C-205ENST00000550013 TFAP4Q01664 338 aa18.34■□□□□ 0.53
RAB5C-205ENST00000550013 CCDC144CPQ8IYA2 1237 aa18.34■□□□□ 0.53
RAB5C-205ENST00000550013 OTUD7AQ8TE49 926 aaPredicted RBP18.34■□□□□ 0.53
RAB5C-205ENST00000550013 GLT1D1Q96MS3 346 aa18.34■□□□□ 0.53
RAB5C-205ENST00000550013 NACAP1Q9BZK3 213 aa18.34■□□□□ 0.53
RAB5C-205ENST00000550013 KATNBL1Q9H079 304 aa18.34■□□□□ 0.53
RAB5C-205ENST00000550013 SYNPO2Q9UMS6 1093 aa18.34■□□□□ 0.53
RAB5C-205ENST00000550013 ELP1O95163 1332 aa18.33■□□□□ 0.53
RAB5C-205ENST00000550013 LRRC37A2A6NM11 1700 aa18.33■□□□□ 0.52
RAB5C-205ENST00000550013 CDK7P50613 346 aa18.33■□□□□ 0.52
RAB5C-205ENST00000550013 GJA9P57773 515 aa18.33■□□□□ 0.52
RAB5C-205ENST00000550013 PDE4BQ07343 736 aa18.33■□□□□ 0.52
RAB5C-205ENST00000550013 PCSK9Q8NBP7 692 aaKnown RBP18.33■□□□□ 0.52
RAB5C-205ENST00000550013 PI4K2BQ8TCG2 481 aa18.33■□□□□ 0.52
RAB5C-205ENST00000550013 VTI1AQ96AJ9 217 aa18.33■□□□□ 0.52
RAB5C-205ENST00000550013 AGBL1Q96MI9 1066 aa18.33■□□□□ 0.52
RAB5C-205ENST00000550013 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.33■□□□□ 0.52
RAB5C-205ENST00000550013 ZNF536O15090 1300 aa18.32■□□□□ 0.52
RAB5C-205ENST00000550013 TTC41PQ6P2S7 1318 aa18.32■□□□□ 0.52
RAB5C-205ENST00000550013 CTAGE5O15320 804 aa18.32■□□□□ 0.52
RAB5C-205ENST00000550013 PPARAQ07869 468 aa18.32■□□□□ 0.52
RAB5C-205ENST00000550013 GNASQ5JWF2 1037 aa18.32■□□□□ 0.52
RAB5C-205ENST00000550013 FAM133AQ8N9E0 248 aa18.32■□□□□ 0.52
RAB5C-205ENST00000550013 FSD1Q9BTV5 496 aa18.32■□□□□ 0.52
RAB5C-205ENST00000550013 NAPBQ9H115 298 aa18.32■□□□□ 0.52
RAB5C-205ENST00000550013 ACAD9Q9H845 621 aa18.32■□□□□ 0.52
RAB5C-205ENST00000550013 SPC25Q9HBM1 224 aa18.32■□□□□ 0.52
RAB5C-205ENST00000550013 A1CFQ9NQ94 594 aaKnown RBP18.32■□□□□ 0.52
RAB5C-205ENST00000550013 MROH7Q68CQ1 1323 aa18.31■□□□□ 0.52
RAB5C-205ENST00000550013 SPTBN5Q9NRC6 3674 aaKnown RBP18.31■□□□□ 0.52
RAB5C-205ENST00000550013 TMEM265A0A087WTH1 108 aa18.31■□□□□ 0.52
RAB5C-205ENST00000550013 A0A0U1RQG5 324 aaPredicted RBP18.31■□□□□ 0.52
RAB5C-205ENST00000550013 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.31■□□□□ 0.52
RAB5C-205ENST00000550013 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.31■□□□□ 0.52
RAB5C-205ENST00000550013 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.31■□□□□ 0.52
RAB5C-205ENST00000550013 SOWAHBA6NEL2 793 aa18.31■□□□□ 0.52
RAB5C-205ENST00000550013 ARVCFO00192 962 aa18.31■□□□□ 0.52
RAB5C-205ENST00000550013 MCCP23508 829 aa18.31■□□□□ 0.52
RAB5C-205ENST00000550013 DNAJB2P25686 324 aa18.31■□□□□ 0.52
RAB5C-205ENST00000550013 STAT2P52630 851 aa18.31■□□□□ 0.52
RAB5C-205ENST00000550013 SNAP25P60880 206 aa18.31■□□□□ 0.52
RAB5C-205ENST00000550013 BEX3Q00994 111 aa18.31■□□□□ 0.52
RAB5C-205ENST00000550013 IKQ13123 557 aaPredicted RBP18.31■□□□□ 0.52
RAB5C-205ENST00000550013 GRIN2CQ14957 1233 aa18.31■□□□□ 0.52
RAB5C-205ENST00000550013 LRRFIP1Q32MZ4 808 aaKnown RBP18.31■□□□□ 0.52
RAB5C-205ENST00000550013 ZMYM1Q5SVZ6 1142 aa18.31■□□□□ 0.52
RAB5C-205ENST00000550013 MFSD5Q6N075 450 aa18.31■□□□□ 0.52
RAB5C-205ENST00000550013 C16orf59Q7L2K0 433 aa18.31■□□□□ 0.52
RAB5C-205ENST00000550013 RASGRP2Q7LDG7 609 aa18.31■□□□□ 0.52
RAB5C-205ENST00000550013 GMCL1Q96IK5 515 aa18.31■□□□□ 0.52
RAB5C-205ENST00000550013 INCENPQ9NQS7 918 aa18.31■□□□□ 0.52
RAB5C-205ENST00000550013 RNF146Q9NTX7 359 aa18.31■□□□□ 0.52
RAB5C-205ENST00000550013 DDX49Q9Y6V7 483 aaKnown RBP18.31■□□□□ 0.52
RAB5C-205ENST00000550013 MYO9BQ13459 2157 aa18.31■□□□□ 0.52
RAB5C-205ENST00000550013 LCTP09848 1927 aa18.31■□□□□ 0.52
RAB5C-205ENST00000550013 CHD9Q3L8U1 2897 aa18.3■□□□□ 0.52
RAB5C-205ENST00000550013 ASTN1O14525 1302 aa18.3■□□□□ 0.52
RAB5C-205ENST00000550013 ERC2O15083 957 aa18.3■□□□□ 0.52
RAB5C-205ENST00000550013 FOXP2O15409 715 aa18.3■□□□□ 0.52
RAB5C-205ENST00000550013 SLC3A2P08195 630 aaKnown RBP18.3■□□□□ 0.52
RAB5C-205ENST00000550013 FDX1P10109 184 aa18.3■□□□□ 0.52
RAB5C-205ENST00000550013 PTGS1P23219 599 aa18.3■□□□□ 0.52
RAB5C-205ENST00000550013 CTDSPL2Q05D32 466 aa18.3■□□□□ 0.52
RAB5C-205ENST00000550013 CCDC129Q6ZRS4 1044 aa18.3■□□□□ 0.52
RAB5C-205ENST00000550013 FAM160B2Q86V87 743 aa18.3■□□□□ 0.52
RAB5C-205ENST00000550013 FAM126BQ8IXS8 530 aa18.3■□□□□ 0.52
RAB5C-205ENST00000550013 CHURC1Q8WUH1 139 aa18.3■□□□□ 0.52
RAB5C-205ENST00000550013 STAG1Q8WVM7 1258 aa18.3■□□□□ 0.52
RAB5C-205ENST00000550013 PCDHB15Q9Y5E8 787 aa18.3■□□□□ 0.52
RAB5C-205ENST00000550013 TTC28Q96AY4 2481 aa18.29■□□□□ 0.52
RAB5C-205ENST00000550013 NMT2O60551 498 aa18.29■□□□□ 0.52
RAB5C-205ENST00000550013 ALAS1P13196 640 aa18.29■□□□□ 0.52
RAB5C-205ENST00000550013 CSF2RAP15509 400 aa18.29■□□□□ 0.52
RAB5C-205ENST00000550013 SLC1A4P43007 532 aa18.29■□□□□ 0.52
RAB5C-205ENST00000550013 TNFAIP2Q03169 654 aa18.29■□□□□ 0.52
RAB5C-205ENST00000550013 PPIGQ13427 754 aaKnown RBP eCLIP18.29■□□□□ 0.52
RAB5C-205ENST00000550013 TMEM240Q5SV17 173 aa18.29■□□□□ 0.52
RAB5C-205ENST00000550013 CCDC174Q6PII3 467 aa18.29■□□□□ 0.52
RAB5C-205ENST00000550013 KCTD1Q719H9 257 aa18.29■□□□□ 0.52
RAB5C-205ENST00000550013 NOL8Q76FK4 1167 aaKnown RBP18.29■□□□□ 0.52
RAB5C-205ENST00000550013 TRERF1Q96PN7 1200 aa18.29■□□□□ 0.52
RAB5C-205ENST00000550013 PPP1R12CQ9BZL4 782 aa18.29■□□□□ 0.52
RAB5C-205ENST00000550013 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms