RNA–Protein interactions for RNA: ENST00000549639.1

USP44-205, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-205ENST00000549639 GJC2Q5T442 439 aaPredicted RBP28.43■■■□□ 2.14
USP44-205ENST00000549639 TTC22Q5TAA0 569 aa28.43■■■□□ 2.14
USP44-205ENST00000549639 BTNL9Q6UXG8 535 aa28.43■■■□□ 2.14
USP44-205ENST00000549639 TBC1D10CQ8IV04 446 aa28.43■■■□□ 2.14
USP44-205ENST00000549639 ZMYND8Q9ULU4 1186 aaPredicted RBP28.43■■■□□ 2.14
USP44-205ENST00000549639 PDE4AP27815 886 aa28.42■■■□□ 2.14
USP44-205ENST00000549639 ANO1Q5XXA6 986 aa28.42■■■□□ 2.14
USP44-205ENST00000549639 GDF15Q99988 308 aa28.42■■■□□ 2.14
USP44-205ENST00000549639 XPNPEP3Q9NQH7 507 aa28.42■■■□□ 2.14
USP44-205ENST00000549639 RNF146Q9NTX7 359 aa28.42■■■□□ 2.14
USP44-205ENST00000549639 LRRC41Q15345 812 aa28.41■■■□□ 2.14
USP44-205ENST00000549639 IMMTQ16891 758 aaKnown RBP28.41■■■□□ 2.14
USP44-205ENST00000549639 RNF180Q86T96 592 aa28.41■■■□□ 2.14
USP44-205ENST00000549639 DGKHQ86XP1 1220 aa28.41■■■□□ 2.14
USP44-205ENST00000549639 AGBL1Q96MI9 1066 aa28.41■■■□□ 2.14
USP44-205ENST00000549639 HOMER2Q9NSB8 354 aa28.41■■■□□ 2.14
USP44-205ENST00000549639 PCDH10Q9P2E7 1040 aa28.41■■■□□ 2.14
USP44-205ENST00000549639 PNMA2Q9UL42 364 aa28.41■■■□□ 2.14
USP44-205ENST00000549639 FAM184BQ9ULE4 1060 aa28.41■■■□□ 2.14
USP44-205ENST00000549639 MTMR7Q9Y216 660 aa28.41■■■□□ 2.14
USP44-205ENST00000549639 IQCA1Q86XH1 822 aa28.4■■■□□ 2.14
USP44-205ENST00000549639 CHMP4CQ96CF2 233 aa28.4■■■□□ 2.14
USP44-205ENST00000549639 TRERF1Q96PN7 1200 aa28.4■■■□□ 2.14
USP44-205ENST00000549639 RAD50Q92878 1312 aa28.4■■■□□ 2.14
USP44-205ENST00000549639 LAMA4Q16363 1823 aa28.39■■■□□ 2.14
USP44-205ENST00000549639 SNAI1O95863 264 aaPredicted RBP28.39■■■□□ 2.14
USP44-205ENST00000549639 TAL1P17542 331 aaPredicted RBP28.39■■■□□ 2.14
USP44-205ENST00000549639 IRX6P78412 446 aaPredicted RBP28.39■■■□□ 2.14
USP44-205ENST00000549639 RANBP17Q9H2T7 1088 aaKnown RBP28.39■■■□□ 2.14
USP44-205ENST00000549639 ABHD16BQ9H3Z7 469 aa28.39■■■□□ 2.14
USP44-205ENST00000549639 POTEB2H3BUK9 544 aa28.38■■■□□ 2.13
USP44-205ENST00000549639 ICAM1P05362 532 aa28.38■■■□□ 2.13
USP44-205ENST00000549639 PDHBP11177 359 aa28.38■■■□□ 2.13
USP44-205ENST00000549639 ALAS1P13196 640 aa28.38■■■□□ 2.13
USP44-205ENST00000549639 SYN1P17600 705 aa28.38■■■□□ 2.13
USP44-205ENST00000549639 SYDE2Q5VT97 1194 aa28.38■■■□□ 2.13
USP44-205ENST00000549639 CCDC174Q6PII3 467 aa28.38■■■□□ 2.13
USP44-205ENST00000549639 RUFY2Q8WXA3 655 aa28.38■■■□□ 2.13
USP44-205ENST00000549639 A1CFQ9NQ94 594 aaKnown RBP28.38■■■□□ 2.13
USP44-205ENST00000549639 CDKN2AIPQ9NXV6 580 aaPredicted RBP28.38■■■□□ 2.13
USP44-205ENST00000549639 SMCHD1A6NHR9 2005 aa28.38■■■□□ 2.13
USP44-205ENST00000549639 NEDD4P46934 1319 aa28.38■■■□□ 2.13
USP44-205ENST00000549639 MYCNP04198 464 aaPredicted RBP28.37■■■□□ 2.13
USP44-205ENST00000549639 SNHG28P0DPA3 235 aa28.37■■■□□ 2.13
USP44-205ENST00000549639 GSPT1P15170 499 aaKnown RBP28.37■■■□□ 2.13
USP44-205ENST00000549639 ATN1P54259 1190 aaPredicted RBP28.37■■■□□ 2.13
USP44-205ENST00000549639 C1orf53Q5VUE5 145 aa28.37■■■□□ 2.13
USP44-205ENST00000549639 SLC39A5Q6ZMH5 540 aa28.37■■■□□ 2.13
USP44-205ENST00000549639 RASGRP2Q7LDG7 609 aa28.37■■■□□ 2.13
USP44-205ENST00000549639 FAM133AQ8N9E0 248 aa28.37■■■□□ 2.13
USP44-205ENST00000549639 CNNM2Q9H8M5 875 aa28.37■■■□□ 2.13
USP44-205ENST00000549639 CCPG1Q9ULG6 757 aa28.37■■■□□ 2.13
USP44-205ENST00000549639 PHF24Q9UPV7 400 aa28.37■■■□□ 2.13
USP44-205ENST00000549639 ACVR2BQ13705 512 aa28.36■■■□□ 2.13
USP44-205ENST00000549639 FGD4Q96M96 766 aa28.36■■■□□ 2.13
USP44-205ENST00000549639 KRT23Q9C075 422 aa28.36■■■□□ 2.13
USP44-205ENST00000549639 ZHX1Q9UKY1 873 aaPredicted RBP28.36■■■□□ 2.13
USP44-205ENST00000549639 ASB14A6NK59 587 aa28.35■■■□□ 2.13
USP44-205ENST00000549639 KDM4AO75164 1064 aa28.35■■■□□ 2.13
USP44-205ENST00000549639 ADCYAP1R1P41586 468 aa28.35■■■□□ 2.13
USP44-205ENST00000549639 MAGEA10P43363 369 aaPredicted RBP28.35■■■□□ 2.13
USP44-205ENST00000549639 RTP1P59025 263 aa28.35■■■□□ 2.13
USP44-205ENST00000549639 ZNF543Q08ER8 600 aa28.35■■■□□ 2.13
USP44-205ENST00000549639 SNX17Q15036 470 aa28.35■■■□□ 2.13
USP44-205ENST00000549639 GPATCH4Q5T3I0 446 aaKnown RBP28.35■■■□□ 2.13
USP44-205ENST00000549639 TTBK2Q6IQ55 1244 aa28.35■■■□□ 2.13
USP44-205ENST00000549639 ARMCX2Q7L311 632 aa28.35■■■□□ 2.13
USP44-205ENST00000549639 ANKS1AQ92625 1134 aa28.35■■■□□ 2.13
USP44-205ENST00000549639 TSEN34Q9BSV6 310 aaKnown RBP28.35■■■□□ 2.13
USP44-205ENST00000549639 PRKAG2Q9UGJ0 569 aa28.35■■■□□ 2.13
USP44-205ENST00000549639 DNAH12Q6ZR08 3092 aa28.35■■■□□ 2.13
USP44-205ENST00000549639 DUSP11O75319 330 aaKnown RBP28.34■■■□□ 2.13
USP44-205ENST00000549639 SLC16A2P36021 539 aa28.34■■■□□ 2.13
USP44-205ENST00000549639 GPCPD1Q9NPB8 672 aa28.34■■■□□ 2.13
USP44-205ENST00000549639 FRMPD2Q68DX3 1309 aaPredicted RBP28.34■■■□□ 2.13
USP44-205ENST00000549639 ADAMTS4O75173 837 aa28.33■■■□□ 2.13
USP44-205ENST00000549639 PGK1P00558 417 aa28.33■■■□□ 2.13
USP44-205ENST00000549639 SNAP25P60880 206 aa28.33■■■□□ 2.13
USP44-205ENST00000549639 CNTN2Q02246 1040 aa28.33■■■□□ 2.13
USP44-205ENST00000549639 CCDC144CPQ8IYA2 1237 aa28.33■■■□□ 2.13
USP44-205ENST00000549639 ZSCAN10Q96SZ4 725 aaPredicted RBP28.33■■■□□ 2.13
USP44-205ENST00000549639 CYP39A1Q9NYL5 469 aa28.33■■■□□ 2.13
USP44-205ENST00000549639 ZKSCAN3Q9BRR0 538 aa28.32■■■□□ 2.12
USP44-205ENST00000549639 KAT14Q9H8E8 782 aa28.32■■■□□ 2.12
USP44-205ENST00000549639 SPC25Q9HBM1 224 aa28.32■■■□□ 2.12
USP44-205ENST00000549639 ATP11BQ9Y2G3 1177 aa28.32■■■□□ 2.12
USP44-205ENST00000549639 B4E1Z4 1266 aa28.31■■■□□ 2.12
USP44-205ENST00000549639 MUM1L1Q5H9M0 696 aa28.31■■■□□ 2.12
USP44-205ENST00000549639 PNMA1Q8ND90 353 aa28.31■■■□□ 2.12
USP44-205ENST00000549639 ZSWIM5Q9P217 1185 aa28.31■■■□□ 2.12
USP44-205ENST00000549639 SYNRGQ9UMZ2 1314 aa28.31■■■□□ 2.12
USP44-205ENST00000549639 WDR19Q8NEZ3 1342 aa28.3■■■□□ 2.12
USP44-205ENST00000549639 LOC102724159A0A0B4J2E5 919 aa28.3■■■□□ 2.12
USP44-205ENST00000549639 SOWAHBA6NEL2 793 aa28.3■■■□□ 2.12
USP44-205ENST00000549639 MOXD2PA6NHM9 499 aa28.3■■■□□ 2.12
USP44-205ENST00000549639 CHMLP26374 656 aa28.3■■■□□ 2.12
USP44-205ENST00000549639 PWP2Q15269 919 aaKnown RBP28.3■■■□□ 2.12
USP44-205ENST00000549639 CCDC144BQ3MJ40 725 aa28.3■■■□□ 2.12
USP44-205ENST00000549639 NSMFQ6X4W1 530 aa28.3■■■□□ 2.12
USP44-205ENST00000549639 FERMT2Q96AC1 680 aa28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms