RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 MTRQ99707 1265 aa11.33□□□□□ -0.6
RAB5B-206ENST00000549505 MXD3Q9BW11 206 aa11.33□□□□□ -0.6
RAB5B-206ENST00000549505 KCNQ5Q9NR82 932 aa11.33□□□□□ -0.6
RAB5B-206ENST00000549505 EP400Q96L91 3159 aa11.33□□□□□ -0.6
RAB5B-206ENST00000549505 PPP1R3GB7ZBB8 358 aa11.33□□□□□ -0.6
RAB5B-206ENST00000549505 CCZ1BP86790 482 aa11.33□□□□□ -0.6
RAB5B-206ENST00000549505 CCZ1P86791 482 aaPredicted RBP11.33□□□□□ -0.6
RAB5B-206ENST00000549505 NAALADL2Q58DX5 795 aa11.33□□□□□ -0.6
RAB5B-206ENST00000549505 HYIQ5T013 277 aa11.33□□□□□ -0.6
RAB5B-206ENST00000549505 NEK8Q86SG6 692 aa11.33□□□□□ -0.6
RAB5B-206ENST00000549505 DBNDD1Q9H9R9 158 aa11.33□□□□□ -0.6
RAB5B-206ENST00000549505 GINM1Q9NU53 330 aa11.33□□□□□ -0.6
RAB5B-206ENST00000549505 SEC63Q9UGP8 760 aaKnown RBP11.33□□□□□ -0.6
RAB5B-206ENST00000549505 CNTNAP1P78357 1384 aa11.33□□□□□ -0.6
RAB5B-206ENST00000549505 SMCO2A6NFE2 343 aa11.33□□□□□ -0.6
RAB5B-206ENST00000549505 DDTLA6NHG4 134 aaPredicted RBP11.33□□□□□ -0.6
RAB5B-206ENST00000549505 ZBTB5O15062 677 aa11.33□□□□□ -0.6
RAB5B-206ENST00000549505 FOXN1O15353 648 aa11.33□□□□□ -0.6
RAB5B-206ENST00000549505 GCFC2P16383 781 aaKnown RBP11.33□□□□□ -0.6
RAB5B-206ENST00000549505 CHRNA5P30532 468 aa11.33□□□□□ -0.6
RAB5B-206ENST00000549505 EN1Q05925 392 aaPredicted RBP11.33□□□□□ -0.6
RAB5B-206ENST00000549505 ZRSR1Q15695 479 aaKnown RBP11.33□□□□□ -0.6
RAB5B-206ENST00000549505 CCDC186Q7Z3E2 898 aa11.33□□□□□ -0.6
RAB5B-206ENST00000549505 FAM83AQ86UY5 434 aa11.33□□□□□ -0.6
RAB5B-206ENST00000549505 ZFPM1Q8IX07 1006 aa11.33□□□□□ -0.6
RAB5B-206ENST00000549505 PIGSQ96S52 555 aa11.33□□□□□ -0.6
RAB5B-206ENST00000549505 DISC1Q9NRI5 854 aa11.33□□□□□ -0.6
RAB5B-206ENST00000549505 RMND1Q9NWS8 449 aa11.33□□□□□ -0.6
RAB5B-206ENST00000549505 PPP1R11O60927 126 aaPredicted RBP11.32□□□□□ -0.6
RAB5B-206ENST00000549505 TPM2P07951 284 aa11.32□□□□□ -0.6
RAB5B-206ENST00000549505 PTGS1P23219 599 aa11.32□□□□□ -0.6
RAB5B-206ENST00000549505 FANCCQ00597 558 aa11.32□□□□□ -0.6
RAB5B-206ENST00000549505 PRIMPOLQ96LW4 560 aa11.32□□□□□ -0.6
RAB5B-206ENST00000549505 TTC12Q9H892 705 aaPredicted RBP11.32□□□□□ -0.6
RAB5B-206ENST00000549505 SPDYE2BA6NHP3 402 aa11.32□□□□□ -0.6
RAB5B-206ENST00000549505 TUBB4AP04350 444 aa11.32□□□□□ -0.6
RAB5B-206ENST00000549505 OR52Z1P0C646 297 aa11.32□□□□□ -0.6
RAB5B-206ENST00000549505 SPDYE6P0CI01 402 aa11.32□□□□□ -0.6
RAB5B-206ENST00000549505 FECHP22830 423 aa11.32□□□□□ -0.6
RAB5B-206ENST00000549505 PBX1P40424 430 aa11.32□□□□□ -0.6
RAB5B-206ENST00000549505 BAG6P46379 1132 aa11.32□□□□□ -0.6
RAB5B-206ENST00000549505 AOC3Q16853 763 aa11.32□□□□□ -0.6
RAB5B-206ENST00000549505 SPDYE2Q495Y8 402 aa11.32□□□□□ -0.6
RAB5B-206ENST00000549505 SPATA1Q5VX52 437 aa11.32□□□□□ -0.6
RAB5B-206ENST00000549505 MSL1Q68DK7 614 aa11.32□□□□□ -0.6
RAB5B-206ENST00000549505 DTHD1Q6ZMT9 781 aa11.32□□□□□ -0.6
RAB5B-206ENST00000549505 HEATR3Q7Z4Q2 680 aa11.32□□□□□ -0.6
RAB5B-206ENST00000549505 VSTM4Q8IW00 320 aa11.32□□□□□ -0.6
RAB5B-206ENST00000549505 ADGRF4Q8IZF3 695 aa11.32□□□□□ -0.6
RAB5B-206ENST00000549505 KCTD17Q8N5Z5 321 aa11.32□□□□□ -0.6
RAB5B-206ENST00000549505 CACTINQ8WUQ7 758 aaKnown RBP11.32□□□□□ -0.6
RAB5B-206ENST00000549505 FAM151AQ8WW52 585 aa11.32□□□□□ -0.6
RAB5B-206ENST00000549505 PYCARDQ9ULZ3 195 aa11.32□□□□□ -0.6
RAB5B-206ENST00000549505 PPP1R2P41236 205 aa11.31□□□□□ -0.6
RAB5B-206ENST00000549505 SCNN1DP51172 638 aa11.31□□□□□ -0.6
RAB5B-206ENST00000549505 NAPAP54920 295 aa11.31□□□□□ -0.6
RAB5B-206ENST00000549505 FCHSD1Q86WN1 690 aa11.31□□□□□ -0.6
RAB5B-206ENST00000549505 C7orf25Q9BPX7 421 aa11.31□□□□□ -0.6
RAB5B-206ENST00000549505 TMEM60Q9H2L4 133 aa11.31□□□□□ -0.6
RAB5B-206ENST00000549505 A0A1B0GTH6 734 aa11.31□□□□□ -0.6
RAB5B-206ENST00000549505 ADCY7P51828 1080 aa11.31□□□□□ -0.6
RAB5B-206ENST00000549505 ZNF658Q5TYW1 1059 aaPredicted RBP11.31□□□□□ -0.6
RAB5B-206ENST00000549505 REXO1Q8N1G1 1221 aaKnown RBP11.31□□□□□ -0.6
RAB5B-206ENST00000549505 ERCC4Q92889 916 aaPredicted RBP11.31□□□□□ -0.6
RAB5B-206ENST00000549505 XPO4Q9C0E2 1151 aaKnown RBP11.31□□□□□ -0.6
RAB5B-206ENST00000549505 RWDD2AQ9UIY3 292 aa11.31□□□□□ -0.6
RAB5B-206ENST00000549505 VWA3AA6NCI4 1184 aa11.31□□□□□ -0.6
RAB5B-206ENST00000549505 KLRC4O43908 158 aa11.31□□□□□ -0.6
RAB5B-206ENST00000549505 RHOBTB3O94955 611 aa11.31□□□□□ -0.6
RAB5B-206ENST00000549505 FMR1Q06787 632 aaKnown RBP eCLIP11.31□□□□□ -0.6
RAB5B-206ENST00000549505 ITIH6Q6UXX5 1313 aa11.3□□□□□ -0.6
RAB5B-206ENST00000549505 PIK3CDO00329 1044 aa11.3□□□□□ -0.6
RAB5B-206ENST00000549505 MCM7P33993 719 aa11.3□□□□□ -0.6
RAB5B-206ENST00000549505 TXLNAP40222 546 aa11.3□□□□□ -0.6
RAB5B-206ENST00000549505 USP11P51784 963 aa11.3□□□□□ -0.6
RAB5B-206ENST00000549505 GHRHRQ02643 423 aa11.3□□□□□ -0.6
RAB5B-206ENST00000549505 AP3B2Q13367 1082 aa11.3□□□□□ -0.6
RAB5B-206ENST00000549505 PICALMQ13492 652 aa11.3□□□□□ -0.6
RAB5B-206ENST00000549505 NR1I3Q14994 352 aa11.3□□□□□ -0.6
RAB5B-206ENST00000549505 CFAP100Q494V2 611 aa11.3□□□□□ -0.6
RAB5B-206ENST00000549505 CERKLQ49MI3 558 aaPredicted RBP11.3□□□□□ -0.6
RAB5B-206ENST00000549505 TPRNQ4KMQ1 711 aa11.3□□□□□ -0.6
RAB5B-206ENST00000549505 SPECC1Q5M775 1068 aa11.3□□□□□ -0.6
RAB5B-206ENST00000549505 FBXO41Q8TF61 875 aa11.3□□□□□ -0.6
RAB5B-206ENST00000549505 INTS13Q9NVM9 706 aa11.3□□□□□ -0.6
RAB5B-206ENST00000549505 NRBP1Q9UHY1 535 aa11.3□□□□□ -0.6
RAB5B-206ENST00000549505 G3V3G9 751 aa11.3□□□□□ -0.6
RAB5B-206ENST00000549505 GOLGA8HP0CJ92 632 aa11.3□□□□□ -0.6
RAB5B-206ENST00000549505 ZNF280AP59817 542 aaPredicted RBP11.3□□□□□ -0.6
RAB5B-206ENST00000549505 DCAF8Q5TAQ9 597 aa11.3□□□□□ -0.6
RAB5B-206ENST00000549505 DHX58Q96C10 678 aa11.3□□□□□ -0.6
RAB5B-206ENST00000549505 MMTAG2Q9BU76 263 aaKnown RBP11.3□□□□□ -0.6
RAB5B-206ENST00000549505 STK17AQ9UEE5 414 aa11.3□□□□□ -0.6
RAB5B-206ENST00000549505 LIMA1Q9UHB6 759 aaKnown RBP11.3□□□□□ -0.6
RAB5B-206ENST00000549505 PSDA5PKW4 1024 aaPredicted RBP11.29□□□□□ -0.6
RAB5B-206ENST00000549505 INF2Q27J81 1249 aa11.29□□□□□ -0.6
RAB5B-206ENST00000549505 TMEM119Q4V9L6 283 aa11.29□□□□□ -0.6
RAB5B-206ENST00000549505 TBX3O15119 743 aa11.29□□□□□ -0.6
RAB5B-206ENST00000549505 EEF2P13639 858 aaKnown RBP11.29□□□□□ -0.6
RAB5B-206ENST00000549505 TRAF1Q13077 416 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms