RNA–Protein interactions for RNA: ENST00000549034.1

RAB5B-205, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-205ENST00000549034 CTCFLQ8NI51 663 aaPredicted RBP11.19□□□□□ -0.62
RAB5B-205ENST00000549034 RAET1EQ8TD07 263 aa11.19□□□□□ -0.62
RAB5B-205ENST00000549034 AGBL1Q96MI9 1066 aa11.19□□□□□ -0.62
RAB5B-205ENST00000549034 NUDT12Q9BQG2 462 aa11.19□□□□□ -0.62
RAB5B-205ENST00000549034 TM6SF1Q9BZW5 370 aa11.19□□□□□ -0.62
RAB5B-205ENST00000549034 MROH8Q9H579 483 aa11.19□□□□□ -0.62
RAB5B-205ENST00000549034 PDRG1Q9NUG6 133 aa11.19□□□□□ -0.62
RAB5B-205ENST00000549034 MAD2L2Q9UI95 211 aa11.19□□□□□ -0.62
RAB5B-205ENST00000549034 ZNF214Q9UL59 606 aaPredicted RBP11.19□□□□□ -0.62
RAB5B-205ENST00000549034 IVNS1ABPQ9Y6Y0 642 aa11.19□□□□□ -0.62
RAB5B-205ENST00000549034 ZSWIM8A7E2V4 1837 aa11.19□□□□□ -0.62
RAB5B-205ENST00000549034 SMCHD1A6NHR9 2005 aa11.18□□□□□ -0.62
RAB5B-205ENST00000549034 STRNO43815 780 aa11.18□□□□□ -0.62
RAB5B-205ENST00000549034 DDAH1O94760 285 aa11.18□□□□□ -0.62
RAB5B-205ENST00000549034 CYP2B6P20813 491 aa11.18□□□□□ -0.62
RAB5B-205ENST00000549034 PTPREP23469 700 aa11.18□□□□□ -0.62
RAB5B-205ENST00000549034 KIF5BP33176 963 aa11.18□□□□□ -0.62
RAB5B-205ENST00000549034 FLT3LGP49771 235 aa11.18□□□□□ -0.62
RAB5B-205ENST00000549034 FXR2P51116 673 aaKnown RBP eCLIP11.18□□□□□ -0.62
RAB5B-205ENST00000549034 OAZ1P54368 228 aa11.18□□□□□ -0.62
RAB5B-205ENST00000549034 ANAPC15P60006 121 aa11.18□□□□□ -0.62
RAB5B-205ENST00000549034 PRKCZQ05513 592 aa11.18□□□□□ -0.62
RAB5B-205ENST00000549034 APOBRQ0VD83 1088 aa11.18□□□□□ -0.62
RAB5B-205ENST00000549034 FBXO46Q6PJ61 603 aaPredicted RBP11.18□□□□□ -0.62
RAB5B-205ENST00000549034 SGMS1Q86VZ5 419 aa11.18□□□□□ -0.62
RAB5B-205ENST00000549034 TNS4Q8IZW8 715 aa11.18□□□□□ -0.62
RAB5B-205ENST00000549034 FANCBQ8NB91 859 aa11.18□□□□□ -0.62
RAB5B-205ENST00000549034 SHCBP1Q8NEM2 672 aa11.18□□□□□ -0.62
RAB5B-205ENST00000549034 BRF1Q92994 677 aa11.18□□□□□ -0.62
RAB5B-205ENST00000549034 TEX13BQ9BXU2 312 aa11.18□□□□□ -0.62
RAB5B-205ENST00000549034 C22orf23Q9BZE7 217 aa11.18□□□□□ -0.62
RAB5B-205ENST00000549034 UPF3BQ9BZI7 483 aaKnown RBP11.18□□□□□ -0.62
RAB5B-205ENST00000549034 RANBP17Q9H2T7 1088 aaKnown RBP11.18□□□□□ -0.62
RAB5B-205ENST00000549034 GJD2Q9UKL4 321 aa11.18□□□□□ -0.62
RAB5B-205ENST00000549034 BRPF3Q9ULD4 1205 aa11.18□□□□□ -0.62
RAB5B-205ENST00000549034 RIPK3Q9Y572 518 aa11.18□□□□□ -0.62
RAB5B-205ENST00000549034 BAZ2BQ9UIF8 2168 aaKnown RBP11.18□□□□□ -0.62
RAB5B-205ENST00000549034 KLF18A0A0U1RQI7 1052 aa11.17□□□□□ -0.62
RAB5B-205ENST00000549034 ATP2A1O14983 1001 aa11.17□□□□□ -0.62
RAB5B-205ENST00000549034 ZBTB43O43298 467 aa11.17□□□□□ -0.62
RAB5B-205ENST00000549034 FCER1AP12319 257 aa11.17□□□□□ -0.62
RAB5B-205ENST00000549034 ALAS1P13196 640 aa11.17□□□□□ -0.62
RAB5B-205ENST00000549034 COPB2P35606 906 aa11.17□□□□□ -0.62
RAB5B-205ENST00000549034 GNAQP50148 359 aa11.17□□□□□ -0.62
RAB5B-205ENST00000549034 DPP9Q86TI2 863 aa11.17□□□□□ -0.62
RAB5B-205ENST00000549034 CCDC82Q8N4S0 544 aa11.17□□□□□ -0.62
RAB5B-205ENST00000549034 PIBF1Q8WXW3 757 aa11.17□□□□□ -0.62
RAB5B-205ENST00000549034 TRERF1Q96PN7 1200 aa11.17□□□□□ -0.62
RAB5B-205ENST00000549034 MMP19Q99542 508 aa11.17□□□□□ -0.62
RAB5B-205ENST00000549034 MAP3K14Q99558 947 aa11.17□□□□□ -0.62
RAB5B-205ENST00000549034 LARP6Q9BRS8 491 aaKnown RBP11.17□□□□□ -0.62
RAB5B-205ENST00000549034 JMJD4Q9H9V9 463 aa11.17□□□□□ -0.62
RAB5B-205ENST00000549034 UPF2Q9HAU5 1272 aaKnown RBP11.17□□□□□ -0.62
RAB5B-205ENST00000549034 HOMER2Q9NSB8 354 aa11.17□□□□□ -0.62
RAB5B-205ENST00000549034 CCPG1Q9ULG6 757 aa11.17□□□□□ -0.62
RAB5B-205ENST00000549034 PTCH2Q9Y6C5 1203 aa11.17□□□□□ -0.62
RAB5B-205ENST00000549034 ZNF536O15090 1300 aa11.16□□□□□ -0.62
RAB5B-205ENST00000549034 MYH6P13533 1939 aa11.16□□□□□ -0.62
RAB5B-205ENST00000549034 SLC15A5A6NIM6 579 aa11.16□□□□□ -0.62
RAB5B-205ENST00000549034 ADCY3O60266 1144 aa11.16□□□□□ -0.62
RAB5B-205ENST00000549034 ICAM1P05362 532 aa11.16□□□□□ -0.62
RAB5B-205ENST00000549034 MAP2K5Q13163 448 aa11.16□□□□□ -0.62
RAB5B-205ENST00000549034 KCTD2Q14681 263 aa11.16□□□□□ -0.62
RAB5B-205ENST00000549034 CDC37Q16543 378 aaPredicted RBP11.16□□□□□ -0.62
RAB5B-205ENST00000549034 TKFCQ3LXA3 575 aa11.16□□□□□ -0.62
RAB5B-205ENST00000549034 MORN1Q5T089 497 aa11.16□□□□□ -0.62
RAB5B-205ENST00000549034 NBPF11Q86T75 865 aa11.16□□□□□ -0.62
RAB5B-205ENST00000549034 MICU3Q86XE3 530 aa11.16□□□□□ -0.62
RAB5B-205ENST00000549034 CMTR1Q8N1G2 835 aaKnown RBP11.16□□□□□ -0.62
RAB5B-205ENST00000549034 CHST13Q8NET6 341 aa11.16□□□□□ -0.62
RAB5B-205ENST00000549034 DDX11Q96FC9 970 aa11.16□□□□□ -0.62
RAB5B-205ENST00000549034 LZTS2Q9BRK4 669 aa11.16□□□□□ -0.62
RAB5B-205ENST00000549034 BIN2Q9UBW5 565 aaPredicted RBP11.16□□□□□ -0.62
RAB5B-205ENST00000549034 GOLGA8AA7E2F4 631 aa11.15□□□□□ -0.62
RAB5B-205ENST00000549034 GOLGA8BA8MQT2 603 aa11.15□□□□□ -0.62
RAB5B-205ENST00000549034 SMARCA1P28370 1054 aa11.15□□□□□ -0.62
RAB5B-205ENST00000549034 ADORA2AP29274 412 aa11.15□□□□□ -0.62
RAB5B-205ENST00000549034 RGS2P41220 211 aa11.15□□□□□ -0.62
RAB5B-205ENST00000549034 NEK4P51957 841 aa11.15□□□□□ -0.62
RAB5B-205ENST00000549034 IRF5Q13568 498 aa11.15□□□□□ -0.62
RAB5B-205ENST00000549034 TOB2Q14106 344 aaPredicted RBP11.15□□□□□ -0.62
RAB5B-205ENST00000549034 RTN1Q16799 776 aa11.15□□□□□ -0.62
RAB5B-205ENST00000549034 QRICH1Q2TAL8 776 aa11.15□□□□□ -0.62
RAB5B-205ENST00000549034 USH1GQ495M9 461 aa11.15□□□□□ -0.62
RAB5B-205ENST00000549034 APOA5Q6Q788 366 aa11.15□□□□□ -0.62
RAB5B-205ENST00000549034 FBXO11Q86XK2 927 aa11.15□□□□□ -0.62
RAB5B-205ENST00000549034 HOMER1Q86YM7 354 aa11.15□□□□□ -0.62
RAB5B-205ENST00000549034 ANKRD35Q8N283 1001 aa11.15□□□□□ -0.62
RAB5B-205ENST00000549034 FBXL16Q8N461 479 aa11.15□□□□□ -0.62
RAB5B-205ENST00000549034 SRBD1Q8N5C6 995 aaKnown RBP11.15□□□□□ -0.62
RAB5B-205ENST00000549034 PIGSQ96S52 555 aa11.15□□□□□ -0.62
RAB5B-205ENST00000549034 RIOX1Q9H6W3 641 aa11.15□□□□□ -0.62
RAB5B-205ENST00000549034 RNF146Q9NTX7 359 aa11.15□□□□□ -0.62
RAB5B-205ENST00000549034 RBM28Q9NW13 759 aaKnown RBP11.15□□□□□ -0.62
RAB5B-205ENST00000549034 SLC5A4Q9NY91 659 aa11.15□□□□□ -0.62
RAB5B-205ENST00000549034 FBXO40Q9UH90 709 aa11.15□□□□□ -0.62
RAB5B-205ENST00000549034 PNMA2Q9UL42 364 aa11.15□□□□□ -0.62
RAB5B-205ENST00000549034 HPS5Q9UPZ3 1129 aa11.15□□□□□ -0.62
RAB5B-205ENST00000549034 ZBTB5O15062 677 aa11.14□□□□□ -0.63
RAB5B-205ENST00000549034 CYTH3O43739 400 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms