RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 F5H6K3 240 aa16.25■□□□□ 0.19
CDX2-202ENST00000548877 OAZ1P54368 228 aa16.25■□□□□ 0.19
CDX2-202ENST00000548877 KLRC3Q07444 240 aa16.25■□□□□ 0.19
CDX2-202ENST00000548877 DDRGK1Q96HY6 314 aa16.25■□□□□ 0.19
CDX2-202ENST00000548877 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.25■□□□□ 0.19
CDX2-202ENST00000548877 SLC38A10Q9HBR0 1119 aa16.25■□□□□ 0.19
CDX2-202ENST00000548877 FBXO40Q9UH90 709 aa16.25■□□□□ 0.19
CDX2-202ENST00000548877 XIRP2A4UGR9 3374 aa16.24■□□□□ 0.19
CDX2-202ENST00000548877 MYH4Q9Y623 1939 aa16.24■□□□□ 0.19
CDX2-202ENST00000548877 CABYRO75952 493 aa16.24■□□□□ 0.19
CDX2-202ENST00000548877 NDUFB10O96000 172 aa16.24■□□□□ 0.19
CDX2-202ENST00000548877 FGBP02675 491 aa16.24■□□□□ 0.19
CDX2-202ENST00000548877 BMP1P13497 986 aa16.24■□□□□ 0.19
CDX2-202ENST00000548877 ATP5JP18859 108 aa16.24■□□□□ 0.19
CDX2-202ENST00000548877 CYP2C18P33260 490 aa16.24■□□□□ 0.19
CDX2-202ENST00000548877 SLFNL1Q499Z3 407 aa16.24■□□□□ 0.19
CDX2-202ENST00000548877 SBK1Q52WX2 424 aa16.24■□□□□ 0.19
CDX2-202ENST00000548877 ARMCX2Q7L311 632 aa16.24■□□□□ 0.19
CDX2-202ENST00000548877 CHST13Q8NET6 341 aa16.24■□□□□ 0.19
CDX2-202ENST00000548877 VTI1AQ96AJ9 217 aa16.24■□□□□ 0.19
CDX2-202ENST00000548877 PPP1R12CQ9BZL4 782 aa16.24■□□□□ 0.19
CDX2-202ENST00000548877 SLC28A3Q9HAS3 691 aa16.24■□□□□ 0.19
CDX2-202ENST00000548877 SYNPO2Q9UMS6 1093 aa16.24■□□□□ 0.19
CDX2-202ENST00000548877 YBX2Q9Y2T7 364 aaKnown RBP16.24■□□□□ 0.19
CDX2-202ENST00000548877 ARIH1Q9Y4X5 557 aaPredicted RBP16.24■□□□□ 0.19
CDX2-202ENST00000548877 TCF20Q9UGU0 1960 aaKnown RBP16.24■□□□□ 0.19
CDX2-202ENST00000548877 ZBED4O75132 1171 aa16.23■□□□□ 0.19
CDX2-202ENST00000548877 IFIT2P09913 472 aaKnown RBP16.23■□□□□ 0.19
CDX2-202ENST00000548877 POU3F3P20264 500 aaPredicted RBP16.23■□□□□ 0.19
CDX2-202ENST00000548877 RASA1P20936 1047 aa16.23■□□□□ 0.19
CDX2-202ENST00000548877 MKL1Q969V6 931 aa16.23■□□□□ 0.19
CDX2-202ENST00000548877 NUP88Q99567 741 aaPredicted RBP16.23■□□□□ 0.19
CDX2-202ENST00000548877 HAUS7Q99871 368 aa16.23■□□□□ 0.19
CDX2-202ENST00000548877 NKX2-4Q9H2Z4 354 aa16.23■□□□□ 0.19
CDX2-202ENST00000548877 ARPP21Q9UBL0 812 aaPredicted RBP16.23■□□□□ 0.19
CDX2-202ENST00000548877 GNEQ9Y223 722 aaKnown RBP16.23■□□□□ 0.19
CDX2-202ENST00000548877 ASTN1O14525 1302 aa16.22■□□□□ 0.19
CDX2-202ENST00000548877 IGKV6D-41A0A0C4DH26 115 aa16.22■□□□□ 0.19
CDX2-202ENST00000548877 FDX1P10109 184 aa16.22■□□□□ 0.19
CDX2-202ENST00000548877 IGFBP4P22692 258 aa16.22■□□□□ 0.19
CDX2-202ENST00000548877 CCDC85BQ15834 202 aaPredicted RBP16.22■□□□□ 0.19
CDX2-202ENST00000548877 GIMAP6Q6P9H5 292 aa16.22■□□□□ 0.19
CDX2-202ENST00000548877 FAM133AQ8N9E0 248 aa16.22■□□□□ 0.19
CDX2-202ENST00000548877 FAM122AQ96E09 287 aa16.22■□□□□ 0.19
CDX2-202ENST00000548877 C1QTNF1Q9BXJ1 281 aa16.22■□□□□ 0.19
CDX2-202ENST00000548877 TSPYL2Q9H2G4 693 aaPredicted RBP16.22■□□□□ 0.19
CDX2-202ENST00000548877 HIPK3Q9H422 1215 aa16.22■□□□□ 0.19
CDX2-202ENST00000548877 PCDHA11Q9Y5I1 949 aa16.22■□□□□ 0.19
CDX2-202ENST00000548877 SLC4A4Q9Y6R1 1079 aa16.22■□□□□ 0.19
CDX2-202ENST00000548877 GRIN2DO15399 1336 aa16.21■□□□□ 0.19
CDX2-202ENST00000548877 RPAP2Q8IXW5 612 aaPredicted RBP16.21■□□□□ 0.19
CDX2-202ENST00000548877 CCDC144CPQ8IYA2 1237 aa16.21■□□□□ 0.19
CDX2-202ENST00000548877 CPXCR1Q8N123 301 aa16.21■□□□□ 0.19
CDX2-202ENST00000548877 ANKRD35Q8N283 1001 aa16.21■□□□□ 0.19
CDX2-202ENST00000548877 IL27Q8NEV9 243 aa16.21■□□□□ 0.19
CDX2-202ENST00000548877 VWCEQ96DN2 955 aa16.21■□□□□ 0.19
CDX2-202ENST00000548877 NOC4LQ9BVI4 516 aaKnown RBP16.21■□□□□ 0.19
CDX2-202ENST00000548877 BOLA2Q9H3K6 86 aa16.21■□□□□ 0.19
CDX2-202ENST00000548877 FEM1BQ9UK73 627 aa16.21■□□□□ 0.19
CDX2-202ENST00000548877 RAD21O60216 631 aa16.2■□□□□ 0.18
CDX2-202ENST00000548877 RAB11FIP3O75154 756 aa16.2■□□□□ 0.18
CDX2-202ENST00000548877 CHGBP05060 677 aa16.2■□□□□ 0.18
CDX2-202ENST00000548877 HOXD11P31277 338 aaPredicted RBP16.2■□□□□ 0.18
CDX2-202ENST00000548877 HNRNPUQ00839 825 aaKnown RBP eCLIP16.2■□□□□ 0.18
CDX2-202ENST00000548877 TNFAIP2Q03169 654 aa16.2■□□□□ 0.18
CDX2-202ENST00000548877 ITGA7Q13683 1181 aa16.2■□□□□ 0.18
CDX2-202ENST00000548877 AAK1Q2M2I8 961 aa16.2■□□□□ 0.18
CDX2-202ENST00000548877 RPUSD2Q8IZ73 545 aaKnown RBP16.2■□□□□ 0.18
CDX2-202ENST00000548877 PUS7LQ9H0K6 701 aaKnown RBP16.2■□□□□ 0.18
CDX2-202ENST00000548877 WNT8AQ9H1J5 351 aa16.2■□□□□ 0.18
CDX2-202ENST00000548877 RAVER2Q9HCJ3 691 aaKnown RBP16.2■□□□□ 0.18
CDX2-202ENST00000548877 Q9Y3F1 56 aa16.2■□□□□ 0.18
CDX2-202ENST00000548877 UMODL1Q5DID0 1318 aa16.19■□□□□ 0.18
CDX2-202ENST00000548877 LRRC37A2A6NM11 1700 aa16.19■□□□□ 0.18
CDX2-202ENST00000548877 APBB1O00213 710 aa16.19■□□□□ 0.18
CDX2-202ENST00000548877 ERC2O15083 957 aa16.19■□□□□ 0.18
CDX2-202ENST00000548877 BEX3Q00994 111 aa16.19■□□□□ 0.18
CDX2-202ENST00000548877 ZSCAN25Q6NSZ9 544 aa16.19■□□□□ 0.18
CDX2-202ENST00000548877 CXCL17Q6UXB2 119 aa16.19■□□□□ 0.18
CDX2-202ENST00000548877 OTOP2Q7RTS6 562 aa16.19■□□□□ 0.18
CDX2-202ENST00000548877 GMCL1P1Q8NEA9 526 aa16.19■□□□□ 0.18
CDX2-202ENST00000548877 STRBPQ96SI9 672 aaKnown RBP16.19■□□□□ 0.18
CDX2-202ENST00000548877 SLC4A7Q9Y6M7 1214 aa16.19■□□□□ 0.18
CDX2-202ENST00000548877 PRRC2BQ5JSZ5 2229 aaKnown RBP16.19■□□□□ 0.18
CDX2-202ENST00000548877 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.18■□□□□ 0.18
CDX2-202ENST00000548877 ASB14A6NK59 587 aa16.18■□□□□ 0.18
CDX2-202ENST00000548877 GSG1L2A8MUP6 293 aa16.18■□□□□ 0.18
CDX2-202ENST00000548877 PFKMP08237 780 aa16.18■□□□□ 0.18
CDX2-202ENST00000548877 CNTN2Q02246 1040 aa16.18■□□□□ 0.18
CDX2-202ENST00000548877 FSCN1Q16658 493 aaKnown RBP16.18■□□□□ 0.18
CDX2-202ENST00000548877 TLK2Q86UE8 772 aa16.18■□□□□ 0.18
CDX2-202ENST00000548877 SIRT2Q8IXJ6 389 aa16.18■□□□□ 0.18
CDX2-202ENST00000548877 KIFC2Q96AC6 838 aa16.18■□□□□ 0.18
CDX2-202ENST00000548877 AGBL1Q96MI9 1066 aa16.18■□□□□ 0.18
CDX2-202ENST00000548877 MKNK2Q9HBH9 465 aa16.18■□□□□ 0.18
CDX2-202ENST00000548877 CLIP2Q9UDT6 1046 aa16.18■□□□□ 0.18
CDX2-202ENST00000548877 CTDP1Q9Y5B0 961 aaPredicted RBP16.18■□□□□ 0.18
CDX2-202ENST00000548877 SOWAHBA6NEL2 793 aa16.17■□□□□ 0.18
CDX2-202ENST00000548877 ZEB2O60315 1214 aa16.17■□□□□ 0.18
CDX2-202ENST00000548877 B4GALT4O60513 344 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms