RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 SPATC1LQ9H0A9 340 aa23.36■■□□□ 1.33
CTDSP2-204ENST00000548823 PUS7LQ9H0K6 701 aaKnown RBP23.36■■□□□ 1.33
CTDSP2-204ENST00000548823 HOXC10Q9NYD6 342 aa23.36■■□□□ 1.33
CTDSP2-204ENST00000548823 NRBP1Q9UHY1 535 aa23.36■■□□□ 1.33
CTDSP2-204ENST00000548823 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.36■■□□□ 1.33
CTDSP2-204ENST00000548823 DCDC2CA8MYV0 355 aa23.35■■□□□ 1.33
CTDSP2-204ENST00000548823 GPAA1O43292 621 aa23.35■■□□□ 1.33
CTDSP2-204ENST00000548823 IGSF3O75054 1194 aa23.35■■□□□ 1.33
CTDSP2-204ENST00000548823 CPA1P15085 419 aa23.35■■□□□ 1.33
CTDSP2-204ENST00000548823 ADGRE1Q14246 886 aa23.35■■□□□ 1.33
CTDSP2-204ENST00000548823 COG2Q14746 738 aa23.35■■□□□ 1.33
CTDSP2-204ENST00000548823 ADGRA1Q86SQ6 560 aa23.35■■□□□ 1.33
CTDSP2-204ENST00000548823 ABRAQ8N0Z2 381 aa23.35■■□□□ 1.33
CTDSP2-204ENST00000548823 MAML3Q96JK9 1138 aa23.35■■□□□ 1.33
CTDSP2-204ENST00000548823 TCF20Q9UGU0 1960 aaKnown RBP23.34■■□□□ 1.33
CTDSP2-204ENST00000548823 IDH1O75874 414 aaKnown RBP23.34■■□□□ 1.33
CTDSP2-204ENST00000548823 TIMP1P01033 207 aa23.34■■□□□ 1.33
CTDSP2-204ENST00000548823 CCDC174Q6PII3 467 aa23.34■■□□□ 1.33
CTDSP2-204ENST00000548823 TMED8Q6PL24 325 aaPredicted RBP23.34■■□□□ 1.33
CTDSP2-204ENST00000548823 TAF6LQ9Y6J9 622 aa23.34■■□□□ 1.33
CTDSP2-204ENST00000548823 MYH1P12882 1939 aa23.34■■□□□ 1.33
CTDSP2-204ENST00000548823 ZMYM6O95789 1325 aa23.33■■□□□ 1.33
CTDSP2-204ENST00000548823 ZNF532Q9HCE3 1301 aa23.33■■□□□ 1.33
CTDSP2-204ENST00000548823 FOXP2O15409 715 aa23.33■■□□□ 1.33
CTDSP2-204ENST00000548823 ALX1Q15699 326 aa23.33■■□□□ 1.33
CTDSP2-204ENST00000548823 RASIP1Q5U651 963 aa23.33■■□□□ 1.33
CTDSP2-204ENST00000548823 TSPYL2Q9H2G4 693 aaPredicted RBP23.33■■□□□ 1.33
CTDSP2-204ENST00000548823 MROH8Q9H579 483 aa23.33■■□□□ 1.33
CTDSP2-204ENST00000548823 GRXCR1A8MXD5 290 aa23.32■■□□□ 1.32
CTDSP2-204ENST00000548823 PGK1P00558 417 aa23.32■■□□□ 1.32
CTDSP2-204ENST00000548823 IGFBP4P22692 258 aa23.32■■□□□ 1.32
CTDSP2-204ENST00000548823 PPIGQ13427 754 aaKnown RBP eCLIP23.32■■□□□ 1.323e-7■■■□□ 15.8
CTDSP2-204ENST00000548823 ABCB5Q2M3G0 1257 aa23.32■■□□□ 1.32
CTDSP2-204ENST00000548823 CERKLQ49MI3 558 aaPredicted RBP23.32■■□□□ 1.32
CTDSP2-204ENST00000548823 TMEM240Q5SV17 173 aa23.32■■□□□ 1.32
CTDSP2-204ENST00000548823 MFSD5Q6N075 450 aa23.32■■□□□ 1.32
CTDSP2-204ENST00000548823 NOL8Q76FK4 1167 aaKnown RBP23.32■■□□□ 1.32
CTDSP2-204ENST00000548823 CABP5Q9NP86 173 aa23.32■■□□□ 1.32
CTDSP2-204ENST00000548823 CXXC1Q9P0U4 656 aaPredicted RBP23.32■■□□□ 1.32
CTDSP2-204ENST00000548823 SERPINB13Q9UIV8 391 aa23.32■■□□□ 1.32
CTDSP2-204ENST00000548823 HCN4Q9Y3Q4 1203 aa23.32■■□□□ 1.32
CTDSP2-204ENST00000548823 ZNFX1Q9P2E3 1918 aaKnown RBP23.32■■□□□ 1.32
CTDSP2-204ENST00000548823 CHD9Q3L8U1 2897 aa23.32■■□□□ 1.32
CTDSP2-204ENST00000548823 BMP1P13497 986 aa23.31■■□□□ 1.32
CTDSP2-204ENST00000548823 PDIA4P13667 645 aaKnown RBP23.31■■□□□ 1.32
CTDSP2-204ENST00000548823 IMMTQ16891 758 aaKnown RBP23.31■■□□□ 1.32
CTDSP2-204ENST00000548823 C16orf59Q7L2K0 433 aa23.31■■□□□ 1.32
CTDSP2-204ENST00000548823 DHX32Q7L7V1 743 aaKnown RBP23.31■■□□□ 1.32
CTDSP2-204ENST00000548823 FBXL16Q8N461 479 aa23.31■■□□□ 1.32
CTDSP2-204ENST00000548823 NECAB3Q96P71 396 aaPredicted RBP23.31■■□□□ 1.32
CTDSP2-204ENST00000548823 TSEN34Q9BSV6 310 aaKnown RBP23.31■■□□□ 1.32
CTDSP2-204ENST00000548823 EHD4Q9H223 541 aa23.31■■□□□ 1.32
CTDSP2-204ENST00000548823 TOB2Q14106 344 aaPredicted RBP23.3■■□□□ 1.32
CTDSP2-204ENST00000548823 STOX1Q6ZVD7 989 aa23.3■■□□□ 1.32
CTDSP2-204ENST00000548823 MB21D1Q8N884 522 aa23.3■■□□□ 1.32
CTDSP2-204ENST00000548823 AGXT2Q9BYV1 514 aa23.3■■□□□ 1.32
CTDSP2-204ENST00000548823 TBX21Q9UL17 535 aa23.3■■□□□ 1.32
CTDSP2-204ENST00000548823 A0A0G2JMZ2 1700 aa23.3■■□□□ 1.32
CTDSP2-204ENST00000548823 E7EWF7 191 aa23.29■■□□□ 1.32
CTDSP2-204ENST00000548823 BRD1O95696 1058 aa23.29■■□□□ 1.32
CTDSP2-204ENST00000548823 FGAP02671 866 aa23.29■■□□□ 1.32
CTDSP2-204ENST00000548823 EXOSC10Q01780 885 aaKnown RBP23.29■■□□□ 1.32
CTDSP2-204ENST00000548823 RAB30Q15771 203 aa23.29■■□□□ 1.32
CTDSP2-204ENST00000548823 NCAPG2Q86XI2 1143 aa23.29■■□□□ 1.32
CTDSP2-204ENST00000548823 NUP133Q8WUM0 1156 aa23.29■■□□□ 1.32
CTDSP2-204ENST00000548823 STRBPQ96SI9 672 aaKnown RBP23.29■■□□□ 1.32
CTDSP2-204ENST00000548823 STARD7Q9NQZ5 370 aa23.29■■□□□ 1.32
CTDSP2-204ENST00000548823 MSRAQ9UJ68 235 aa23.29■■□□□ 1.32
CTDSP2-204ENST00000548823 ROBO3Q96MS0 1386 aa23.29■■□□□ 1.32
CTDSP2-204ENST00000548823 FCER1AP12319 257 aa23.28■■□□□ 1.32
CTDSP2-204ENST00000548823 GNAT2P19087 354 aa23.28■■□□□ 1.32
CTDSP2-204ENST00000548823 ME3Q16798 604 aa23.28■■□□□ 1.32
CTDSP2-204ENST00000548823 LRFN3Q9BTN0 628 aa23.28■■□□□ 1.32
CTDSP2-204ENST00000548823 TPCN1Q9ULQ1 816 aa23.28■■□□□ 1.32
CTDSP2-204ENST00000548823 ZDHHC9Q9Y397 364 aa23.28■■□□□ 1.32
CTDSP2-204ENST00000548823 ACLYP53396 1101 aa23.27■■□□□ 1.32
CTDSP2-204ENST00000548823 DYNLL1P63167 89 aaKnown RBP23.27■■□□□ 1.32
CTDSP2-204ENST00000548823 PLS1Q14651 629 aa23.27■■□□□ 1.32
CTDSP2-204ENST00000548823 AAK1Q2M2I8 961 aa23.27■■□□□ 1.32
CTDSP2-204ENST00000548823 MAGEB6Q8N7X4 407 aa23.27■■□□□ 1.32
CTDSP2-204ENST00000548823 TANGO6Q9C0B7 1094 aa23.27■■□□□ 1.32
CTDSP2-204ENST00000548823 WDR19Q8NEZ3 1342 aa23.27■■□□□ 1.32
CTDSP2-204ENST00000548823 PATL2C9JE40 543 aaKnown RBP23.27■■□□□ 1.31
CTDSP2-204ENST00000548823 GOLGA6L22H0YM25 854 aa23.27■■□□□ 1.31
CTDSP2-204ENST00000548823 ADAMTS4O75173 837 aa23.27■■□□□ 1.31
CTDSP2-204ENST00000548823 BAG4O95429 457 aaKnown RBP23.27■■□□□ 1.31
CTDSP2-204ENST00000548823 LARGE1O95461 756 aa23.27■■□□□ 1.31
CTDSP2-204ENST00000548823 AKR1A1P14550 325 aa23.27■■□□□ 1.31
CTDSP2-204ENST00000548823 GUCY1A2P33402 732 aa23.27■■□□□ 1.31
CTDSP2-204ENST00000548823 PSRC1Q6PGN9 363 aaPredicted RBP23.27■■□□□ 1.31
CTDSP2-204ENST00000548823 TTC6Q86TZ1 520 aa23.27■■□□□ 1.31
CTDSP2-204ENST00000548823 TINF2Q9BSI4 451 aa23.27■■□□□ 1.31
CTDSP2-204ENST00000548823 SMC3Q9UQE7 1217 aa23.27■■□□□ 1.31
CTDSP2-204ENST00000548823 MROH7Q68CQ1 1323 aa23.26■■□□□ 1.31
CTDSP2-204ENST00000548823 MOXD2PA6NHM9 499 aa23.26■■□□□ 1.31
CTDSP2-204ENST00000548823 DSG3P32926 999 aa23.26■■□□□ 1.31
CTDSP2-204ENST00000548823 USP5P45974 858 aa23.26■■□□□ 1.31
CTDSP2-204ENST00000548823 ZNF365Q70YC5 407 aa23.26■■□□□ 1.31
CTDSP2-204ENST00000548823 CERS3Q8IU89 383 aa23.26■■□□□ 1.31
CTDSP2-204ENST00000548823 TMEM199Q8N511 208 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms