RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 PLA2G6O60733 806 aa18.5■□□□□ 0.55
DDX54-205ENST00000548786 CDC45O75419 566 aa18.5■□□□□ 0.55
DDX54-205ENST00000548786 OAZ1P54368 228 aa18.5■□□□□ 0.55
DDX54-205ENST00000548786 CCDC178Q5BJE1 867 aa18.5■□□□□ 0.55
DDX54-205ENST00000548786 IFIT1BQ5T764 474 aaKnown RBP18.5■□□□□ 0.55
DDX54-205ENST00000548786 ANO1Q5XXA6 986 aa18.5■□□□□ 0.55
DDX54-205ENST00000548786 OLFML2BQ68BL8 750 aa18.5■□□□□ 0.55
DDX54-205ENST00000548786 CRISPLD2Q9H0B8 497 aa18.5■□□□□ 0.55
DDX54-205ENST00000548786 RNF146Q9NTX7 359 aa18.5■□□□□ 0.55
DDX54-205ENST00000548786 CCPG1Q9ULG6 757 aa18.5■□□□□ 0.55
DDX54-205ENST00000548786 ZNF792Q3KQV3 632 aa18.49■□□□□ 0.55
DDX54-205ENST00000548786 CASC1Q6TDU7 716 aa18.49■□□□□ 0.55
DDX54-205ENST00000548786 TRERF1Q96PN7 1200 aa18.49■□□□□ 0.55
DDX54-205ENST00000548786 UBA5Q9GZZ9 404 aa18.49■□□□□ 0.55
DDX54-205ENST00000548786 IFIT3O14879 490 aaKnown RBP18.48■□□□□ 0.55
DDX54-205ENST00000548786 SNHG28P0DPA3 235 aa18.48■□□□□ 0.55
DDX54-205ENST00000548786 FDX1P10109 184 aa18.48■□□□□ 0.55
DDX54-205ENST00000548786 CYBAP13498 195 aa18.48■□□□□ 0.55
DDX54-205ENST00000548786 MUM1L1Q5H9M0 696 aa18.48■□□□□ 0.55
DDX54-205ENST00000548786 CHST13Q8NET6 341 aa18.48■□□□□ 0.55
DDX54-205ENST00000548786 NCOA7Q8NI08 942 aa18.48■□□□□ 0.55
DDX54-205ENST00000548786 PAWRQ96IZ0 340 aaKnown RBP18.48■□□□□ 0.55
DDX54-205ENST00000548786 RANBP17Q9H2T7 1088 aaKnown RBP18.48■□□□□ 0.55
DDX54-205ENST00000548786 ACAD9Q9H845 621 aa18.48■□□□□ 0.55
DDX54-205ENST00000548786 SENP2Q9HC62 589 aa18.48■□□□□ 0.55
DDX54-205ENST00000548786 PPP4R2Q9NY27 417 aa18.48■□□□□ 0.55
DDX54-205ENST00000548786 FBXO40Q9UH90 709 aa18.48■□□□□ 0.55
DDX54-205ENST00000548786 SLC27A2O14975 620 aa18.47■□□□□ 0.55
DDX54-205ENST00000548786 NT5C2P49902 561 aa18.47■□□□□ 0.55
DDX54-205ENST00000548786 SEC23AQ15436 765 aa18.47■□□□□ 0.55
DDX54-205ENST00000548786 LHX8Q68G74 356 aa18.47■□□□□ 0.55
DDX54-205ENST00000548786 BTNL9Q6UXG8 535 aa18.47■□□□□ 0.55
DDX54-205ENST00000548786 UBE2Q1Q7Z7E8 422 aa18.47■□□□□ 0.55
DDX54-205ENST00000548786 ANKS1AQ92625 1134 aa18.47■□□□□ 0.55
DDX54-205ENST00000548786 DHX16O60231 1041 aaKnown RBP18.46■□□□□ 0.55
DDX54-205ENST00000548786 IGHA2P01877 340 aa18.46■□□□□ 0.55
DDX54-205ENST00000548786 MYCNP04198 464 aaPredicted RBP18.46■□□□□ 0.55
DDX54-205ENST00000548786 ICAM1P05362 532 aa18.46■□□□□ 0.55
DDX54-205ENST00000548786 ANTXR2P58335 489 aa18.46■□□□□ 0.55
DDX54-205ENST00000548786 CNTN2Q02246 1040 aa18.46■□□□□ 0.55
DDX54-205ENST00000548786 COL9A3Q14050 684 aaPredicted RBP18.46■□□□□ 0.55
DDX54-205ENST00000548786 GPATCH4Q5T3I0 446 aaKnown RBP18.46■□□□□ 0.55
DDX54-205ENST00000548786 CREB3L3Q68CJ9 461 aa18.46■□□□□ 0.55
DDX54-205ENST00000548786 NSMFQ6X4W1 530 aa18.46■□□□□ 0.55
DDX54-205ENST00000548786 DPF3Q92784 378 aa18.46■□□□□ 0.55
DDX54-205ENST00000548786 TINF2Q9BSI4 451 aa18.46■□□□□ 0.55
DDX54-205ENST00000548786 A1CFQ9NQ94 594 aaKnown RBP18.46■□□□□ 0.55
DDX54-205ENST00000548786 DDX20Q9UHI6 824 aaKnown RBP18.46■□□□□ 0.55
DDX54-205ENST00000548786 OGDHLQ9ULD0 1010 aa18.46■□□□□ 0.55
DDX54-205ENST00000548786 FRMPD3Q5JV73 1810 aa18.46■□□□□ 0.55
DDX54-205ENST00000548786 DNAJC25-GNG10A0A024R161 153 aa18.45■□□□□ 0.54
DDX54-205ENST00000548786 ERICH2A1L162 156 aa18.45■□□□□ 0.54
DDX54-205ENST00000548786 PARP1P09874 1014 aaKnown RBP18.45■□□□□ 0.54
DDX54-205ENST00000548786 USH1GQ495M9 461 aa18.45■□□□□ 0.54
DDX54-205ENST00000548786 TMEM67Q5HYA8 995 aa18.45■□□□□ 0.54
DDX54-205ENST00000548786 MB21D2Q8IYB1 491 aaPredicted RBP18.45■□□□□ 0.54
DDX54-205ENST00000548786 STAG2Q8N3U4 1231 aa18.45■□□□□ 0.54
DDX54-205ENST00000548786 VAT1LQ9HCJ6 419 aa18.45■□□□□ 0.54
DDX54-205ENST00000548786 GPHNQ9NQX3 736 aaPredicted RBP18.45■□□□□ 0.54
DDX54-205ENST00000548786 DDX49Q9Y6V7 483 aaKnown RBP18.45■□□□□ 0.54
DDX54-205ENST00000548786 SMCHD1A6NHR9 2005 aa18.45■□□□□ 0.54
DDX54-205ENST00000548786 POTEB2H3BUK9 544 aa18.44■□□□□ 0.54
DDX54-205ENST00000548786 MNX1P50219 401 aaPredicted RBP18.44■□□□□ 0.54
DDX54-205ENST00000548786 WTAPQ15007 396 aa18.44■□□□□ 0.54
DDX54-205ENST00000548786 SART3Q15020 963 aaKnown RBP18.44■□□□□ 0.54
DDX54-205ENST00000548786 TKFCQ3LXA3 575 aa18.44■□□□□ 0.54
DDX54-205ENST00000548786 ASPRV1Q53RT3 343 aa18.44■□□□□ 0.54
DDX54-205ENST00000548786 ADGRF4Q8IZF3 695 aa18.44■□□□□ 0.54
DDX54-205ENST00000548786 LENG1Q96BZ8 264 aaPredicted RBP18.44■□□□□ 0.54
DDX54-205ENST00000548786 FGD4Q96M96 766 aa18.44■□□□□ 0.54
DDX54-205ENST00000548786 PURBQ96QR8 312 aaKnown RBP18.44■□□□□ 0.54
DDX54-205ENST00000548786 DIS3Q9Y2L1 958 aaKnown RBP18.44■□□□□ 0.54
DDX54-205ENST00000548786 NFIBO00712 420 aa18.43■□□□□ 0.54
DDX54-205ENST00000548786 PRC1O43663 620 aa18.43■□□□□ 0.54
DDX54-205ENST00000548786 NECTIN1Q15223 517 aa18.43■□□□□ 0.54
DDX54-205ENST00000548786 CDC37Q16543 378 aaPredicted RBP18.43■□□□□ 0.54
DDX54-205ENST00000548786 NECAB2Q7Z6G3 386 aa18.43■□□□□ 0.54
DDX54-205ENST00000548786 ZHX1Q9UKY1 873 aaPredicted RBP18.43■□□□□ 0.54
DDX54-205ENST00000548786 CNPY2Q9Y2B0 182 aa18.43■□□□□ 0.54
DDX54-205ENST00000548786 PTPDC1A2A3K4 754 aa18.42■□□□□ 0.54
DDX54-205ENST00000548786 SEPT4O43236 478 aa18.42■□□□□ 0.54
DDX54-205ENST00000548786 ANKLE1Q8NAG6 615 aa18.42■□□□□ 0.54
DDX54-205ENST00000548786 MYL10Q9BUA6 226 aa18.42■□□□□ 0.54
DDX54-205ENST00000548786 LRRC2Q9BYS8 371 aa18.42■□□□□ 0.54
DDX54-205ENST00000548786 C11orf49Q9H6J7 331 aa18.42■□□□□ 0.54
DDX54-205ENST00000548786 CYP39A1Q9NYL5 469 aa18.42■□□□□ 0.54
DDX54-205ENST00000548786 PFASO15067 1338 aa18.42■□□□□ 0.54
DDX54-205ENST00000548786 MCM3APO60318 1980 aa18.41■□□□□ 0.54
DDX54-205ENST00000548786 SOWAHBA6NEL2 793 aa18.41■□□□□ 0.54
DDX54-205ENST00000548786 SNAI1O95863 264 aaPredicted RBP18.41■□□□□ 0.54
DDX54-205ENST00000548786 GJC2Q5T442 439 aaPredicted RBP18.41■□□□□ 0.54
DDX54-205ENST00000548786 PRPF38BQ5VTL8 546 aaKnown RBP18.41■□□□□ 0.54
DDX54-205ENST00000548786 SLC30A10Q6XR72 485 aa18.41■□□□□ 0.54
DDX54-205ENST00000548786 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.41■□□□□ 0.54
DDX54-205ENST00000548786 CCDC144CPQ8IYA2 1237 aa18.41■□□□□ 0.54
DDX54-205ENST00000548786 FAM133AQ8N9E0 248 aa18.41■□□□□ 0.54
DDX54-205ENST00000548786 IGDCC4Q8TDY8 1250 aa18.41■□□□□ 0.54
DDX54-205ENST00000548786 NUP133Q8WUM0 1156 aa18.41■□□□□ 0.54
DDX54-205ENST00000548786 HTATIP2Q9BUP3 242 aa18.41■□□□□ 0.54
DDX54-205ENST00000548786 MAD2L2Q9UI95 211 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms