RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 KCTD1Q719H9 257 aa13.41□□□□□ -0.26
BEST3-209ENST00000548658 IQCA1Q86XH1 822 aa13.41□□□□□ -0.26
BEST3-209ENST00000548658 DGKHQ86XP1 1220 aa13.41□□□□□ -0.26
BEST3-209ENST00000548658 RUFY2Q8WXA3 655 aa13.41□□□□□ -0.26
BEST3-209ENST00000548658 TMEM47Q9BQJ4 181 aa13.41□□□□□ -0.26
BEST3-209ENST00000548658 ACAD9Q9H845 621 aa13.41□□□□□ -0.26
BEST3-209ENST00000548658 AKR1A1P14550 325 aa13.4□□□□□ -0.26
BEST3-209ENST00000548658 CCDC96Q2M329 555 aa13.4□□□□□ -0.26
BEST3-209ENST00000548658 TTC22Q5TAA0 569 aa13.4□□□□□ -0.26
BEST3-209ENST00000548658 BTNL9Q6UXG8 535 aa13.4□□□□□ -0.26
BEST3-209ENST00000548658 RNF180Q86T96 592 aa13.4□□□□□ -0.26
BEST3-209ENST00000548658 RBM27Q9P2N5 1060 aaKnown RBP13.4□□□□□ -0.26
BEST3-209ENST00000548658 PRR12Q9ULL5 1215 aa13.4□□□□□ -0.26
BEST3-209ENST00000548658 SSUH2Q9Y2M2 353 aa13.4□□□□□ -0.26
BEST3-209ENST00000548658 TACC3Q9Y6A5 838 aa13.4□□□□□ -0.26
BEST3-209ENST00000548658 BMP8BP34820 402 aa13.39□□□□□ -0.27
BEST3-209ENST00000548658 GJC2Q5T442 439 aaPredicted RBP13.39□□□□□ -0.27
BEST3-209ENST00000548658 TRERF1Q96PN7 1200 aa13.39□□□□□ -0.27
BEST3-209ENST00000548658 KRT23Q9C075 422 aa13.39□□□□□ -0.27
BEST3-209ENST00000548658 PRO3102Q9H379 93 aa13.39□□□□□ -0.27
BEST3-209ENST00000548658 ABHD16BQ9H3Z7 469 aa13.39□□□□□ -0.27
BEST3-209ENST00000548658 CNNM2Q9H8M5 875 aa13.39□□□□□ -0.27
BEST3-209ENST00000548658 XPNPEP3Q9NQH7 507 aa13.39□□□□□ -0.27
BEST3-209ENST00000548658 HOMER2Q9NSB8 354 aa13.39□□□□□ -0.27
BEST3-209ENST00000548658 RNF146Q9NTX7 359 aa13.39□□□□□ -0.27
BEST3-209ENST00000548658 FAM184BQ9ULE4 1060 aa13.39□□□□□ -0.27
BEST3-209ENST00000548658 MTMR7Q9Y216 660 aa13.39□□□□□ -0.27
BEST3-209ENST00000548658 ZNF536O15090 1300 aa13.39□□□□□ -0.27
BEST3-209ENST00000548658 RAD50Q92878 1312 aa13.39□□□□□ -0.27
BEST3-209ENST00000548658 PLXNA1Q9UIW2 1896 aa13.38□□□□□ -0.27
BEST3-209ENST00000548658 POTEB2H3BUK9 544 aa13.38□□□□□ -0.27
BEST3-209ENST00000548658 ICAM1P05362 532 aa13.38□□□□□ -0.27
BEST3-209ENST00000548658 ZNF865P0CJ78 1059 aaPredicted RBP13.38□□□□□ -0.27
BEST3-209ENST00000548658 ALAS1P13196 640 aa13.38□□□□□ -0.27
BEST3-209ENST00000548658 PDE4AP27815 886 aa13.38□□□□□ -0.27
BEST3-209ENST00000548658 FXR1P51114 621 aaKnown RBP eCLIP13.38□□□□□ -0.27
BEST3-209ENST00000548658 IRX6P78412 446 aaPredicted RBP13.38□□□□□ -0.27
BEST3-209ENST00000548658 LRRC26Q2I0M4 334 aa13.38□□□□□ -0.27
BEST3-209ENST00000548658 GPATCH4Q5T3I0 446 aaKnown RBP13.38□□□□□ -0.27
BEST3-209ENST00000548658 ANO1Q5XXA6 986 aa13.38□□□□□ -0.27
BEST3-209ENST00000548658 TBC1D10CQ8IV04 446 aa13.38□□□□□ -0.27
BEST3-209ENST00000548658 AGBL1Q96MI9 1066 aa13.38□□□□□ -0.27
BEST3-209ENST00000548658 PCDH10Q9P2E7 1040 aa13.38□□□□□ -0.27
BEST3-209ENST00000548658 PRKAG2Q9UGJ0 569 aa13.38□□□□□ -0.27
BEST3-209ENST00000548658 ASB14A6NK59 587 aa13.37□□□□□ -0.27
BEST3-209ENST00000548658 KDM4AO75164 1064 aa13.37□□□□□ -0.27
BEST3-209ENST00000548658 SNAI1O95863 264 aaPredicted RBP13.37□□□□□ -0.27
BEST3-209ENST00000548658 PDHBP11177 359 aa13.37□□□□□ -0.27
BEST3-209ENST00000548658 ACVR2BQ13705 512 aa13.37□□□□□ -0.27
BEST3-209ENST00000548658 LRRC41Q15345 812 aa13.37□□□□□ -0.27
BEST3-209ENST00000548658 SYDE2Q5VT97 1194 aa13.37□□□□□ -0.27
BEST3-209ENST00000548658 C1orf53Q5VUE5 145 aa13.37□□□□□ -0.27
BEST3-209ENST00000548658 CCDC174Q6PII3 467 aa13.37□□□□□ -0.27
BEST3-209ENST00000548658 FAM133AQ8N9E0 248 aa13.37□□□□□ -0.27
BEST3-209ENST00000548658 ANKS1AQ92625 1134 aa13.37□□□□□ -0.27
BEST3-209ENST00000548658 CHMP4CQ96CF2 233 aa13.37□□□□□ -0.27
BEST3-209ENST00000548658 GDF15Q99988 308 aa13.37□□□□□ -0.27
BEST3-209ENST00000548658 RANBP17Q9H2T7 1088 aaKnown RBP13.37□□□□□ -0.27
BEST3-209ENST00000548658 SPC25Q9HBM1 224 aa13.37□□□□□ -0.27
BEST3-209ENST00000548658 A1CFQ9NQ94 594 aaKnown RBP13.37□□□□□ -0.27
BEST3-209ENST00000548658 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.37□□□□□ -0.27
BEST3-209ENST00000548658 CCPG1Q9ULG6 757 aa13.37□□□□□ -0.27
BEST3-209ENST00000548658 ZMYND8Q9ULU4 1186 aaPredicted RBP13.37□□□□□ -0.27
BEST3-209ENST00000548658 FRMPD3Q5JV73 1810 aa13.36□□□□□ -0.27
BEST3-209ENST00000548658 SMCHD1A6NHR9 2005 aa13.36□□□□□ -0.27
BEST3-209ENST00000548658 DUSP11O75319 330 aaKnown RBP13.36□□□□□ -0.27
BEST3-209ENST00000548658 SNHG28P0DPA3 235 aa13.36□□□□□ -0.27
BEST3-209ENST00000548658 GSPT1P15170 499 aaKnown RBP13.36□□□□□ -0.27
BEST3-209ENST00000548658 TAL1P17542 331 aaPredicted RBP13.36□□□□□ -0.27
BEST3-209ENST00000548658 ATN1P54259 1190 aaPredicted RBP13.36□□□□□ -0.27
BEST3-209ENST00000548658 ZNF543Q08ER8 600 aa13.36□□□□□ -0.27
BEST3-209ENST00000548658 TRDNQ13061 729 aa13.36□□□□□ -0.27
BEST3-209ENST00000548658 SLC39A5Q6ZMH5 540 aa13.36□□□□□ -0.27
BEST3-209ENST00000548658 ARMCX2Q7L311 632 aa13.36□□□□□ -0.27
BEST3-209ENST00000548658 ZSCAN10Q96SZ4 725 aaPredicted RBP13.36□□□□□ -0.27
BEST3-209ENST00000548658 UBAC1Q9BSL1 405 aa13.36□□□□□ -0.27
BEST3-209ENST00000548658 TSEN34Q9BSV6 310 aaKnown RBP13.36□□□□□ -0.27
BEST3-209ENST00000548658 KAT14Q9H8E8 782 aa13.36□□□□□ -0.27
BEST3-209ENST00000548658 GPCPD1Q9NPB8 672 aa13.36□□□□□ -0.27
BEST3-209ENST00000548658 ZSWIM5Q9P217 1185 aa13.36□□□□□ -0.27
BEST3-209ENST00000548658 ZHX1Q9UKY1 873 aaPredicted RBP13.36□□□□□ -0.27
BEST3-209ENST00000548658 PHF24Q9UPV7 400 aa13.36□□□□□ -0.27
BEST3-209ENST00000548658 NEDD4P46934 1319 aa13.36□□□□□ -0.27
BEST3-209ENST00000548658 ALPK3Q96L96 1907 aa13.35□□□□□ -0.27
BEST3-209ENST00000548658 LOC102724159A0A0B4J2E5 919 aa13.35□□□□□ -0.27
BEST3-209ENST00000548658 SYN1P17600 705 aa13.35□□□□□ -0.27
BEST3-209ENST00000548658 SLC16A2P36021 539 aa13.35□□□□□ -0.27
BEST3-209ENST00000548658 ADCYAP1R1P41586 468 aa13.35□□□□□ -0.27
BEST3-209ENST00000548658 PWP2Q15269 919 aaKnown RBP13.35□□□□□ -0.27
BEST3-209ENST00000548658 TTBK2Q6IQ55 1244 aa13.35□□□□□ -0.27
BEST3-209ENST00000548658 CCDC144CPQ8IYA2 1237 aa13.35□□□□□ -0.27
BEST3-209ENST00000548658 PNMA1Q8ND90 353 aa13.35□□□□□ -0.27
BEST3-209ENST00000548658 NUP133Q8WUM0 1156 aa13.35□□□□□ -0.27
BEST3-209ENST00000548658 LBHD1Q9BQE6 289 aaPredicted RBP13.35□□□□□ -0.27
BEST3-209ENST00000548658 ZKSCAN3Q9BRR0 538 aa13.35□□□□□ -0.27
BEST3-209ENST00000548658 MAF1Q9H063 256 aa13.35□□□□□ -0.27
BEST3-209ENST00000548658 ADD3Q9UEY8 706 aaKnown RBP13.35□□□□□ -0.27
BEST3-209ENST00000548658 FRMPD2Q68DX3 1309 aaPredicted RBP13.35□□□□□ -0.27
BEST3-209ENST00000548658 MOXD2PA6NHM9 499 aa13.34□□□□□ -0.27
BEST3-209ENST00000548658 B4E1Z4 1266 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms