RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 SKOR2Q2VWA4 1001 aaPredicted RBP6.43□□□□□ -1.38
SCAF11-210ENST00000547654 BBS9Q3SYG4 887 aa6.43□□□□□ -1.38
SCAF11-210ENST00000547654 SEZ6Q53EL9 994 aa6.43□□□□□ -1.38
SCAF11-210ENST00000547654 GALNT18Q6P9A2 607 aa6.43□□□□□ -1.38
SCAF11-210ENST00000547654 TMC6Q7Z403 805 aa6.43□□□□□ -1.38
SCAF11-210ENST00000547654 ZDHHC14Q8IZN3 488 aa6.43□□□□□ -1.38
SCAF11-210ENST00000547654 BORCS6Q96GS4 357 aa6.43□□□□□ -1.38
SCAF11-210ENST00000547654 FCRL2Q96LA5 508 aaPredicted RBP6.43□□□□□ -1.38
SCAF11-210ENST00000547654 PLCD4Q9BRC7 762 aa6.43□□□□□ -1.38
SCAF11-210ENST00000547654 ZNRF3Q9ULT6 936 aa6.43□□□□□ -1.38
SCAF11-210ENST00000547654 GPR55Q9Y2T6 319 aaPredicted RBP6.43□□□□□ -1.38
SCAF11-210ENST00000547654 PCDHGB7Q9Y5F8 929 aa6.43□□□□□ -1.38
SCAF11-210ENST00000547654 PRAMEF1O95521 474 aa6.42□□□□□ -1.38
SCAF11-210ENST00000547654 ENDOUP21128 410 aaKnown RBP6.42□□□□□ -1.38
SCAF11-210ENST00000547654 RAD51AP2Q09MP3 1159 aa6.42□□□□□ -1.38
SCAF11-210ENST00000547654 NBPF12Q5TAG4 269 aaPredicted RBP6.42□□□□□ -1.38
SCAF11-210ENST00000547654 ZPBP2Q6X784 338 aa6.42□□□□□ -1.38
SCAF11-210ENST00000547654 TMEM192Q8IY95 271 aa6.42□□□□□ -1.38
SCAF11-210ENST00000547654 EPB41L4AQ9HCS5 686 aaPredicted RBP6.42□□□□□ -1.38
SCAF11-210ENST00000547654 TNFRSF10DQ9UBN6 386 aa6.42□□□□□ -1.38
SCAF11-210ENST00000547654 WTIPA6NIX2 430 aaPredicted RBP6.41□□□□□ -1.38
SCAF11-210ENST00000547654 NME1P15531 152 aaKnown RBP6.41□□□□□ -1.38
SCAF11-210ENST00000547654 HDLBPQ00341 1268 aaKnown RBP6.41□□□□□ -1.38
SCAF11-210ENST00000547654 SNW1Q13573 536 aaKnown RBP6.41□□□□□ -1.38
SCAF11-210ENST00000547654 RAB3GAP1Q15042 981 aa6.41□□□□□ -1.38
SCAF11-210ENST00000547654 NBPF9Q3BBW0 867 aa6.41□□□□□ -1.38
SCAF11-210ENST00000547654 KIAA0825Q8IV33 1275 aa6.41□□□□□ -1.38
SCAF11-210ENST00000547654 RBBP8NLQ8NC74 664 aaPredicted RBP6.41□□□□□ -1.38
SCAF11-210ENST00000547654 SPON2Q9BUD6 331 aa6.41□□□□□ -1.38
SCAF11-210ENST00000547654 NUDT19A8MXV4 375 aa6.4□□□□□ -1.38
SCAF11-210ENST00000547654 SHOXO15266 292 aa6.4□□□□□ -1.38
SCAF11-210ENST00000547654 SIGLEC6O43699 453 aa6.4□□□□□ -1.38
SCAF11-210ENST00000547654 APOBRQ0VD83 1088 aa6.4□□□□□ -1.38
SCAF11-210ENST00000547654 LAPTM5Q13571 262 aa6.4□□□□□ -1.38
SCAF11-210ENST00000547654 HSF5Q4G112 596 aaPredicted RBP6.4□□□□□ -1.38
SCAF11-210ENST00000547654 NLRC3Q7RTR2 1065 aa6.4□□□□□ -1.38
SCAF11-210ENST00000547654 USP48Q86UV5 1035 aa6.4□□□□□ -1.38
SCAF11-210ENST00000547654 FAM129CQ86XR2 697 aa6.4□□□□□ -1.38
SCAF11-210ENST00000547654 TAB3Q8N5C8 712 aaPredicted RBP6.4□□□□□ -1.38
SCAF11-210ENST00000547654 SYT8Q8NBV8 401 aa6.4□□□□□ -1.38
SCAF11-210ENST00000547654 SREK1Q8WXA9 508 aaKnown RBP6.4□□□□□ -1.38
SCAF11-210ENST00000547654 NKD1Q969G9 470 aa6.4□□□□□ -1.38
SCAF11-210ENST00000547654 TEPSINQ96N21 525 aa6.4□□□□□ -1.38
SCAF11-210ENST00000547654 PWWP2AQ96N64 755 aa6.4□□□□□ -1.38
SCAF11-210ENST00000547654 C8orf37Q96NL8 207 aa6.4□□□□□ -1.38
SCAF11-210ENST00000547654 SLC9A7Q96T83 725 aa6.4□□□□□ -1.38
SCAF11-210ENST00000547654 CDADC1Q9BWV3 514 aa6.4□□□□□ -1.38
SCAF11-210ENST00000547654 LUC7LQ9NQ29 371 aaKnown RBP6.4□□□□□ -1.38
SCAF11-210ENST00000547654 ZC3H12DA2A288 527 aaKnown RBP6.39□□□□□ -1.39
SCAF11-210ENST00000547654 FADS2P1A8MWK0 482 aa6.39□□□□□ -1.39
SCAF11-210ENST00000547654 MEIS1O00470 390 aa6.39□□□□□ -1.39
SCAF11-210ENST00000547654 SCAMP3O14828 347 aaKnown RBP6.39□□□□□ -1.39
SCAF11-210ENST00000547654 CLEC3AO75596 197 aa6.39□□□□□ -1.39
SCAF11-210ENST00000547654 PRKCAP17252 672 aa6.39□□□□□ -1.39
SCAF11-210ENST00000547654 CCNFP41002 786 aa6.39□□□□□ -1.39
SCAF11-210ENST00000547654 INTS3Q68E01 1043 aaKnown RBP6.39□□□□□ -1.39
SCAF11-210ENST00000547654 GK5Q6ZS86 529 aa6.39□□□□□ -1.39
SCAF11-210ENST00000547654 LDHDQ86WU2 507 aa6.39□□□□□ -1.39
SCAF11-210ENST00000547654 IGDCC3Q8IVU1 814 aa6.39□□□□□ -1.39
SCAF11-210ENST00000547654 TMEFF1Q8IYR6 380 aa6.39□□□□□ -1.39
SCAF11-210ENST00000547654 FAM177A1Q8N128 213 aaPredicted RBP6.39□□□□□ -1.39
SCAF11-210ENST00000547654 NUP43Q8NFH3 380 aa6.39□□□□□ -1.39
SCAF11-210ENST00000547654 RASGRP4Q8TDF6 673 aa6.39□□□□□ -1.39
SCAF11-210ENST00000547654 RNF34Q969K3 372 aa6.39□□□□□ -1.39
SCAF11-210ENST00000547654 DRC1Q96MC2 740 aa6.39□□□□□ -1.39
SCAF11-210ENST00000547654 CHST7Q9NS84 486 aa6.39□□□□□ -1.39
SCAF11-210ENST00000547654 KLHL14Q9P2G3 628 aa6.39□□□□□ -1.39
SCAF11-210ENST00000547654 ADRB1P08588 477 aa6.38□□□□□ -1.39
SCAF11-210ENST00000547654 GJA8P48165 433 aa6.38□□□□□ -1.39
SCAF11-210ENST00000547654 ZNF165P49910 485 aa6.38□□□□□ -1.39
SCAF11-210ENST00000547654 CYP4F8P98187 520 aa6.38□□□□□ -1.39
SCAF11-210ENST00000547654 LINC01356Q8N9X3 169 aa6.38□□□□□ -1.39
SCAF11-210ENST00000547654 ZNF512BQ96KM6 892 aaPredicted RBP6.38□□□□□ -1.39
SCAF11-210ENST00000547654 PRDM14Q9GZV8 571 aa6.38□□□□□ -1.39
SCAF11-210ENST00000547654 MKRN2Q9H000 416 aaKnown RBP6.38□□□□□ -1.39
SCAF11-210ENST00000547654 ADAM7Q9H2U9 754 aa6.38□□□□□ -1.39
SCAF11-210ENST00000547654 ERVK13-1Q9NX77 482 aa6.38□□□□□ -1.39
SCAF11-210ENST00000547654 SOX9P48436 509 aa6.37□□□□□ -1.39
SCAF11-210ENST00000547654 ZC3H6P61129 1189 aaKnown RBP6.37□□□□□ -1.39
SCAF11-210ENST00000547654 KIR3DS1Q14943 382 aa6.37□□□□□ -1.39
SCAF11-210ENST00000547654 FRMD5Q7Z6J6 570 aa6.37□□□□□ -1.39
SCAF11-210ENST00000547654 SLCO6A1Q86UG4 719 aa6.37□□□□□ -1.39
SCAF11-210ENST00000547654 MINPP1Q9UNW1 487 aa6.37□□□□□ -1.39
SCAF11-210ENST00000547654 BUB1BO60566 1050 aaPredicted RBP6.36□□□□□ -1.39
SCAF11-210ENST00000547654 NCKAP1LP55160 1127 aa6.36□□□□□ -1.39
SCAF11-210ENST00000547654 KRTAP10-2P60368 255 aa6.36□□□□□ -1.39
SCAF11-210ENST00000547654 PLEKHN1Q494U1 663 aaPredicted RBP6.36□□□□□ -1.39
SCAF11-210ENST00000547654 BDH2Q9BUT1 245 aa6.36□□□□□ -1.39
SCAF11-210ENST00000547654 TNFRSF12AQ9NP84 129 aa6.36□□□□□ -1.39
SCAF11-210ENST00000547654 GFOD1Q9NXC2 390 aa6.36□□□□□ -1.39
SCAF11-210ENST00000547654 PCDHB12Q9Y5F1 795 aa6.36□□□□□ -1.39
SCAF11-210ENST00000547654 A0A1W2PQ45 241 aaPredicted RBP6.35□□□□□ -1.39
SCAF11-210ENST00000547654 A0A1W2PQY0 241 aa6.35□□□□□ -1.39
SCAF11-210ENST00000547654 C9IYK1 514 aa6.35□□□□□ -1.39
SCAF11-210ENST00000547654 CANXP27824 592 aaKnown RBP6.35□□□□□ -1.39
SCAF11-210ENST00000547654 BMP8BP34820 402 aa6.35□□□□□ -1.39
SCAF11-210ENST00000547654 PAK2Q13177 524 aa6.35□□□□□ -1.39
SCAF11-210ENST00000547654 SF3A1Q15459 793 aaKnown RBP6.35□□□□□ -1.39
SCAF11-210ENST00000547654 ZYXQ15942 572 aaKnown RBP6.35□□□□□ -1.39
SCAF11-210ENST00000547654 SPATS1Q496A3 300 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms