RNA–Protein interactions for RNA: ENST00000547372.5

RBFOX1-208, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-208ENST00000547372 PIDD1Q9HB75 910 aa13.23□□□□□ -0.29
RBFOX1-208ENST00000547372 THRAP3Q9Y2W1 955 aaKnown RBP13.23□□□□□ -0.29
RBFOX1-208ENST00000547372 CACNA1FO60840 1977 aa13.23□□□□□ -0.29
RBFOX1-208ENST00000547372 NCAPD2Q15021 1401 aa13.23□□□□□ -0.29
RBFOX1-208ENST00000547372 RCCD1A6NED2 376 aa13.23□□□□□ -0.29
RBFOX1-208ENST00000547372 GCOM1H8Y6P7 765 aaPredicted RBP13.23□□□□□ -0.29
RBFOX1-208ENST00000547372 ZBTB43O43298 467 aa13.23□□□□□ -0.29
RBFOX1-208ENST00000547372 MYZAPP0CAP1 466 aa13.23□□□□□ -0.29
RBFOX1-208ENST00000547372 EIF4A1P60842 406 aaKnown RBP13.23□□□□□ -0.29
RBFOX1-208ENST00000547372 ZC3H6P61129 1189 aaKnown RBP13.23□□□□□ -0.29
RBFOX1-208ENST00000547372 MORC3Q14149 939 aa13.23□□□□□ -0.29
RBFOX1-208ENST00000547372 MDM1Q8TC05 714 aa13.23□□□□□ -0.29
RBFOX1-208ENST00000547372 KAZALD1Q96I82 304 aa13.23□□□□□ -0.29
RBFOX1-208ENST00000547372 BABAM1Q9NWV8 329 aa13.23□□□□□ -0.29
RBFOX1-208ENST00000547372 KCNJ14Q9UNX9 436 aa13.23□□□□□ -0.29
RBFOX1-208ENST00000547372 EMBQ6PCB8 327 aa13.22□□□□□ -0.29
RBFOX1-208ENST00000547372 CMTR1Q8N1G2 835 aaKnown RBP13.22□□□□□ -0.29
RBFOX1-208ENST00000547372 CHCHD3Q9NX63 227 aaKnown RBP13.22□□□□□ -0.29
RBFOX1-208ENST00000547372 SMNDC1O75940 238 aaKnown RBP eCLIP13.22□□□□□ -0.29
RBFOX1-208ENST00000547372 HEXIM1O94992 359 aaKnown RBP13.22□□□□□ -0.29
RBFOX1-208ENST00000547372 HSPD1P10809 573 aaKnown RBP13.22□□□□□ -0.29
RBFOX1-208ENST00000547372 XBP1P17861 261 aa13.22□□□□□ -0.29
RBFOX1-208ENST00000547372 MDM2Q00987 491 aaPredicted RBP13.22□□□□□ -0.29
RBFOX1-208ENST00000547372 ANKRD13DQ6ZTN6 518 aa13.22□□□□□ -0.29
RBFOX1-208ENST00000547372 KLHL7Q8IXQ5 586 aa13.22□□□□□ -0.29
RBFOX1-208ENST00000547372 KBTBD3Q8NAB2 608 aa13.22□□□□□ -0.29
RBFOX1-208ENST00000547372 EPAS1Q99814 870 aa13.22□□□□□ -0.29
RBFOX1-208ENST00000547372 DSCC1Q9BVC3 393 aa13.22□□□□□ -0.29
RBFOX1-208ENST00000547372 MLXIPQ9HAP2 919 aa13.22□□□□□ -0.29
RBFOX1-208ENST00000547372 LMCD1Q9NZU5 365 aa13.22□□□□□ -0.29
RBFOX1-208ENST00000547372 NOVA2Q9UNW9 492 aaKnown RBP13.22□□□□□ -0.29
RBFOX1-208ENST00000547372 IGSF1Q8N6C5 1336 aa13.22□□□□□ -0.29
RBFOX1-208ENST00000547372 RTN3O95197 1032 aaPredicted RBP13.22□□□□□ -0.29
RBFOX1-208ENST00000547372 MOCS3O95396 460 aa13.22□□□□□ -0.29
RBFOX1-208ENST00000547372 KRT83P78385 493 aa13.22□□□□□ -0.29
RBFOX1-208ENST00000547372 DRP2Q13474 957 aa13.22□□□□□ -0.29
RBFOX1-208ENST00000547372 PTPROQ16827 1216 aa13.22□□□□□ -0.29
RBFOX1-208ENST00000547372 LRRC23Q53EV4 343 aaPredicted RBP13.22□□□□□ -0.29
RBFOX1-208ENST00000547372 TAX1BP1Q86VP1 789 aa13.22□□□□□ -0.29
RBFOX1-208ENST00000547372 UBLCP1Q8WVY7 318 aaPredicted RBP13.22□□□□□ -0.29
RBFOX1-208ENST00000547372 RAPGEF4Q8WZA2 1011 aa13.22□□□□□ -0.29
RBFOX1-208ENST00000547372 ZKSCAN3Q9BRR0 538 aa13.22□□□□□ -0.29
RBFOX1-208ENST00000547372 TRIM4Q9C037 500 aa13.22□□□□□ -0.29
RBFOX1-208ENST00000547372 EID1Q9Y6B2 187 aa13.22□□□□□ -0.29
RBFOX1-208ENST00000547372 FAM237AA0A1B0GTK4 181 aa13.21□□□□□ -0.29
RBFOX1-208ENST00000547372 MGRN1O60291 552 aa13.21□□□□□ -0.29
RBFOX1-208ENST00000547372 GLI1P08151 1106 aa13.21□□□□□ -0.29
RBFOX1-208ENST00000547372 PYGBP11216 843 aa13.21□□□□□ -0.29
RBFOX1-208ENST00000547372 ERCC5P28715 1186 aaPredicted RBP13.21□□□□□ -0.29
RBFOX1-208ENST00000547372 HERVK_113P62684 666 aa13.21□□□□□ -0.29
RBFOX1-208ENST00000547372 PAK2Q13177 524 aa13.21□□□□□ -0.29
RBFOX1-208ENST00000547372 CCDC57Q2TAC2 916 aa13.21□□□□□ -0.29
RBFOX1-208ENST00000547372 CHADLQ6NUI6 762 aa13.21□□□□□ -0.29
RBFOX1-208ENST00000547372 IFT20Q8IY31 132 aa13.21□□□□□ -0.29
RBFOX1-208ENST00000547372 ARFGAP2Q8N6H7 521 aa13.21□□□□□ -0.29
RBFOX1-208ENST00000547372 LRWD1Q9UFC0 647 aa13.21□□□□□ -0.29
RBFOX1-208ENST00000547372 ATP4AP20648 1035 aa13.21□□□□□ -0.29
RBFOX1-208ENST00000547372 PAPD7Q5XG87 772 aaKnown RBP13.21□□□□□ -0.29
RBFOX1-208ENST00000547372 C6orf89Q6UWU4 347 aa13.21□□□□□ -0.29
RBFOX1-208ENST00000547372 APTXQ7Z2E3 356 aaKnown RBP13.21□□□□□ -0.29
RBFOX1-208ENST00000547372 LONP2Q86WA8 852 aa13.21□□□□□ -0.29
RBFOX1-208ENST00000547372 CABP5Q9NP86 173 aa13.21□□□□□ -0.29
RBFOX1-208ENST00000547372 HOMER3Q9NSC5 361 aa13.21□□□□□ -0.29
RBFOX1-208ENST00000547372 RBM12Q9NTZ6 932 aaKnown RBP13.21□□□□□ -0.29
RBFOX1-208ENST00000547372 PCDHGC5Q9Y5F6 944 aa13.21□□□□□ -0.29
RBFOX1-208ENST00000547372 PRR36Q9H6K5 1346 aa13.21□□□□□ -0.29
RBFOX1-208ENST00000547372 TLDC2A0PJX2 215 aa13.21□□□□□ -0.3
RBFOX1-208ENST00000547372 LRRD1A4D1F6 860 aa13.21□□□□□ -0.3
RBFOX1-208ENST00000547372 BTBD18B2RXH4 712 aa13.21□□□□□ -0.3
RBFOX1-208ENST00000547372 PBX1P40424 430 aa13.21□□□□□ -0.3
RBFOX1-208ENST00000547372 TTF1Q15361 905 aaPredicted RBP13.21□□□□□ -0.3
RBFOX1-208ENST00000547372 OSBPL9Q96SU4 736 aa13.21□□□□□ -0.3
RBFOX1-208ENST00000547372 CCDC113Q9H0I3 377 aa13.21□□□□□ -0.3
RBFOX1-208ENST00000547372 ABCF2Q9UG63 623 aa13.21□□□□□ -0.3
RBFOX1-208ENST00000547372 CD2APQ9Y5K6 639 aa13.21□□□□□ -0.3
RBFOX1-208ENST00000547372 A8MUI8 341 aa13.2□□□□□ -0.3
RBFOX1-208ENST00000547372 BUB1O43683 1085 aa13.2□□□□□ -0.3
RBFOX1-208ENST00000547372 VIMP08670 466 aaKnown RBP13.2□□□□□ -0.3
RBFOX1-208ENST00000547372 LINGO3P0C6S8 592 aa13.2□□□□□ -0.3
RBFOX1-208ENST00000547372 TRIML1Q8N9V2 468 aa13.2□□□□□ -0.3
RBFOX1-208ENST00000547372 TEKT4Q8WW24 435 aa13.2□□□□□ -0.3
RBFOX1-208ENST00000547372 MAP3K14Q99558 947 aa13.2□□□□□ -0.3
RBFOX1-208ENST00000547372 HAUS7Q99871 368 aa13.2□□□□□ -0.3
RBFOX1-208ENST00000547372 TANGO6Q9C0B7 1094 aa13.2□□□□□ -0.3
RBFOX1-208ENST00000547372 FLT4P35916 1363 aa13.2□□□□□ -0.3
RBFOX1-208ENST00000547372 DPPA5A6NC42 116 aa13.2□□□□□ -0.3
RBFOX1-208ENST00000547372 B4E1Z4 1266 aa13.2□□□□□ -0.3
RBFOX1-208ENST00000547372 CTNNA1P35221 906 aaKnown RBP13.2□□□□□ -0.3
RBFOX1-208ENST00000547372 ANKS4BQ8N8V4 417 aa13.2□□□□□ -0.3
RBFOX1-208ENST00000547372 DRAXINQ8NBI3 349 aaPredicted RBP13.2□□□□□ -0.3
RBFOX1-208ENST00000547372 ZNF594Q96JF6 807 aaPredicted RBP13.2□□□□□ -0.3
RBFOX1-208ENST00000547372 KRT12Q99456 494 aa13.2□□□□□ -0.3
RBFOX1-208ENST00000547372 SELENOSQ9BQE4 189 aa13.2□□□□□ -0.3
RBFOX1-208ENST00000547372 LBHD1Q9BQE6 289 aaPredicted RBP13.2□□□□□ -0.3
RBFOX1-208ENST00000547372 INCENPQ9NQS7 918 aa13.2□□□□□ -0.3
RBFOX1-208ENST00000547372 HPS5Q9UPZ3 1129 aa13.2□□□□□ -0.3
RBFOX1-208ENST00000547372 hCG_1642624A0A1W2PR95 340 aa13.19□□□□□ -0.3
RBFOX1-208ENST00000547372 TACC1O75410 805 aa13.19□□□□□ -0.3
RBFOX1-208ENST00000547372 TRIM37O94972 964 aa13.19□□□□□ -0.3
RBFOX1-208ENST00000547372 EPB41P11171 864 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms