RNA–Protein interactions for RNA: ENST00000547208.5

BEST3-208, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 1,187 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-208ENST00000547208 TCP11L1Q9NUJ3 509 aa12.19□□□□□ -0.46
BEST3-208ENST00000547208 NRBP1Q9UHY1 535 aa12.19□□□□□ -0.46
BEST3-208ENST00000547208 NEDD4P46934 1319 aa12.18□□□□□ -0.46
BEST3-208ENST00000547208 ZNF865P0CJ78 1059 aaPredicted RBP12.18□□□□□ -0.46
BEST3-208ENST00000547208 FDX1P10109 184 aa12.18□□□□□ -0.46
BEST3-208ENST00000547208 SYN1P17600 705 aa12.18□□□□□ -0.46
BEST3-208ENST00000547208 MFAP1P55081 439 aaKnown RBP12.18□□□□□ -0.46
BEST3-208ENST00000547208 RRP12Q5JTH9 1297 aaKnown RBP12.18□□□□□ -0.46
BEST3-208ENST00000547208 MAMDC4Q6UXC1 1216 aa12.18□□□□□ -0.46
BEST3-208ENST00000547208 FAM160B2Q86V87 743 aa12.18□□□□□ -0.46
BEST3-208ENST00000547208 CHURC1Q8WUH1 139 aa12.18□□□□□ -0.46
BEST3-208ENST00000547208 TMEM47Q9BQJ4 181 aa12.18□□□□□ -0.46
BEST3-208ENST00000547208 DIAPH3Q9NSV4 1193 aa12.18□□□□□ -0.46
BEST3-208ENST00000547208 PRR12Q9ULL5 1215 aa12.18□□□□□ -0.46
BEST3-208ENST00000547208 ZMYND8Q9ULU4 1186 aaPredicted RBP12.18□□□□□ -0.46
BEST3-208ENST00000547208 VCANP13611 3396 aa12.18□□□□□ -0.46
BEST3-208ENST00000547208 SYNGAP1Q96PV0 1343 aa12.17□□□□□ -0.46
BEST3-208ENST00000547208 SNAI1O95863 264 aaPredicted RBP12.17□□□□□ -0.46
BEST3-208ENST00000547208 TOP1P11387 765 aaKnown RBP12.17□□□□□ -0.46
BEST3-208ENST00000547208 PCP11498 1178 aaKnown RBP12.17□□□□□ -0.46
BEST3-208ENST00000547208 SLC4A3P48751 1232 aa12.17□□□□□ -0.46
BEST3-208ENST00000547208 GJC2Q5T442 439 aaPredicted RBP12.17□□□□□ -0.46
BEST3-208ENST00000547208 TTC22Q5TAA0 569 aa12.17□□□□□ -0.46
BEST3-208ENST00000547208 ZNF467Q7Z7K2 595 aaPredicted RBP12.17□□□□□ -0.46
BEST3-208ENST00000547208 MSL3Q8N5Y2 521 aaKnown RBP12.17□□□□□ -0.46
BEST3-208ENST00000547208 CHST13Q8NET6 341 aa12.17□□□□□ -0.46
BEST3-208ENST00000547208 DCAF4Q8WV16 495 aa12.17□□□□□ -0.46
BEST3-208ENST00000547208 AGBL1Q96MI9 1066 aa12.17□□□□□ -0.46
BEST3-208ENST00000547208 GDF15Q99988 308 aa12.17□□□□□ -0.46
BEST3-208ENST00000547208 DSCC1Q9BVC3 393 aa12.17□□□□□ -0.46
BEST3-208ENST00000547208 SENP6Q9GZR1 1112 aaPredicted RBP12.17□□□□□ -0.46
BEST3-208ENST00000547208 HIP1O00291 1037 aa12.16□□□□□ -0.46
BEST3-208ENST00000547208 SNAP25P60880 206 aa12.16□□□□□ -0.46
BEST3-208ENST00000547208 LRRC41Q15345 812 aa12.16□□□□□ -0.46
BEST3-208ENST00000547208 TTBK2Q6IQ55 1244 aa12.16□□□□□ -0.46
BEST3-208ENST00000547208 BTNL9Q6UXG8 535 aa12.16□□□□□ -0.46
BEST3-208ENST00000547208 MFSD6Q6ZSS7 791 aa12.16□□□□□ -0.46
BEST3-208ENST00000547208 ARRDC4Q8NCT1 418 aa12.16□□□□□ -0.46
BEST3-208ENST00000547208 LENG1Q96BZ8 264 aaPredicted RBP12.16□□□□□ -0.46
BEST3-208ENST00000547208 DDX11Q96FC9 970 aa12.16□□□□□ -0.46
BEST3-208ENST00000547208 TOMM22Q9NS69 142 aa12.16□□□□□ -0.46
BEST3-208ENST00000547208 HOMER2Q9NSB8 354 aa12.16□□□□□ -0.46
BEST3-208ENST00000547208 FBXO40Q9UH90 709 aa12.16□□□□□ -0.46
BEST3-208ENST00000547208 ASTN1O14525 1302 aa12.15□□□□□ -0.46
BEST3-208ENST00000547208 EYSQ5T1H1 3165 aa12.15□□□□□ -0.46
BEST3-208ENST00000547208 A0A1W2PPC1 479 aa12.15□□□□□ -0.46
BEST3-208ENST00000547208 ZNF213O14771 459 aa12.15□□□□□ -0.46
BEST3-208ENST00000547208 ADCY6O43306 1168 aa12.15□□□□□ -0.46
BEST3-208ENST00000547208 SNHG28P0DPA3 235 aa12.15□□□□□ -0.46
BEST3-208ENST00000547208 PDHBP11177 359 aa12.15□□□□□ -0.46
BEST3-208ENST00000547208 BMP8BP34820 402 aa12.15□□□□□ -0.46
BEST3-208ENST00000547208 CNTN2Q02246 1040 aa12.15□□□□□ -0.46
BEST3-208ENST00000547208 IKQ13123 557 aaPredicted RBP12.15□□□□□ -0.46
BEST3-208ENST00000547208 SNX17Q15036 470 aa12.15□□□□□ -0.46
BEST3-208ENST00000547208 ANKRD35Q8N283 1001 aa12.15□□□□□ -0.46
BEST3-208ENST00000547208 FAM133AQ8N9E0 248 aa12.15□□□□□ -0.46
BEST3-208ENST00000547208 TTC14Q96N46 770 aa12.15□□□□□ -0.46
BEST3-208ENST00000547208 KATNBL1Q9H079 304 aa12.15□□□□□ -0.46
BEST3-208ENST00000547208 RANBP17Q9H2T7 1088 aaKnown RBP12.15□□□□□ -0.46
BEST3-208ENST00000547208 RNF41Q9H4P4 317 aaPredicted RBP12.15□□□□□ -0.46
BEST3-208ENST00000547208 ACAD9Q9H845 621 aa12.15□□□□□ -0.46
BEST3-208ENST00000547208 A1CFQ9NQ94 594 aaKnown RBP12.15□□□□□ -0.46
BEST3-208ENST00000547208 RNF146Q9NTX7 359 aa12.15□□□□□ -0.46
BEST3-208ENST00000547208 ISY1Q9ULR0 285 aaKnown RBP12.15□□□□□ -0.46
BEST3-208ENST00000547208 MTMR7Q9Y216 660 aa12.15□□□□□ -0.46
BEST3-208ENST00000547208 CTDP1Q9Y5B0 961 aaPredicted RBP12.15□□□□□ -0.46
BEST3-208ENST00000547208 FRMPD2Q68DX3 1309 aaPredicted RBP12.14□□□□□ -0.47
BEST3-208ENST00000547208 ADAMTS4O75173 837 aa12.14□□□□□ -0.47
BEST3-208ENST00000547208 ICAM1P05362 532 aa12.14□□□□□ -0.47
BEST3-208ENST00000547208 RARBP10826 455 aa12.14□□□□□ -0.47
BEST3-208ENST00000547208 AKR1A1P14550 325 aa12.14□□□□□ -0.47
BEST3-208ENST00000547208 SLC16A2P36021 539 aa12.14□□□□□ -0.47
BEST3-208ENST00000547208 MAGEA10P43363 369 aaPredicted RBP12.14□□□□□ -0.47
BEST3-208ENST00000547208 ATN1P54259 1190 aaPredicted RBP12.14□□□□□ -0.47
BEST3-208ENST00000547208 ZNF543Q08ER8 600 aa12.14□□□□□ -0.47
BEST3-208ENST00000547208 CCDC96Q2M329 555 aa12.14□□□□□ -0.47
BEST3-208ENST00000547208 TKFCQ3LXA3 575 aa12.14□□□□□ -0.47
BEST3-208ENST00000547208 MUM1L1Q5H9M0 696 aa12.14□□□□□ -0.47
BEST3-208ENST00000547208 CCDC174Q6PII3 467 aa12.14□□□□□ -0.47
BEST3-208ENST00000547208 SLC39A5Q6ZMH5 540 aa12.14□□□□□ -0.47
BEST3-208ENST00000547208 ESR2Q92731 530 aa12.14□□□□□ -0.47
BEST3-208ENST00000547208 TRERF1Q96PN7 1200 aa12.14□□□□□ -0.47
BEST3-208ENST00000547208 ZKSCAN3Q9BRR0 538 aa12.14□□□□□ -0.47
BEST3-208ENST00000547208 COL25A1Q9BXS0 654 aaPredicted RBP12.14□□□□□ -0.47
BEST3-208ENST00000547208 XPNPEP3Q9NQH7 507 aa12.14□□□□□ -0.47
BEST3-208ENST00000547208 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.14□□□□□ -0.47
BEST3-208ENST00000547208 PHF24Q9UPV7 400 aa12.14□□□□□ -0.47
BEST3-208ENST00000547208 CNPY2Q9Y2B0 182 aa12.14□□□□□ -0.47
BEST3-208ENST00000547208 KIAA1217Q5T5P2 1943 aa12.13□□□□□ -0.47
BEST3-208ENST00000547208 SOWAHBA6NEL2 793 aa12.13□□□□□ -0.47
BEST3-208ENST00000547208 B4E1Z4 1266 aa12.13□□□□□ -0.47
BEST3-208ENST00000547208 KBTBD13C9JR72 458 aa12.13□□□□□ -0.47
BEST3-208ENST00000547208 KDM4AO75164 1064 aa12.13□□□□□ -0.47
BEST3-208ENST00000547208 PGK1P00558 417 aa12.13□□□□□ -0.47
BEST3-208ENST00000547208 ALAS1P13196 640 aa12.13□□□□□ -0.47
BEST3-208ENST00000547208 ADCYAP1R1P41586 468 aa12.13□□□□□ -0.47
BEST3-208ENST00000547208 NT5C2P49902 561 aa12.13□□□□□ -0.47
BEST3-208ENST00000547208 RTP1P59025 263 aa12.13□□□□□ -0.47
BEST3-208ENST00000547208 ACVR2BQ13705 512 aa12.13□□□□□ -0.47
BEST3-208ENST00000547208 SYDE2Q5VT97 1194 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms