RNA–Protein interactions for RNA: ENST00000547204.5

ARFGAP1-220, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 2 BASIC

Gene ARFGAP1, Length 1,327 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-220ENST00000547204 FAM160B2Q86V87 743 aa19.45■□□□□ 0.7
ARFGAP1-220ENST00000547204 CCDC148Q8NFR7 591 aa19.45■□□□□ 0.7
ARFGAP1-220ENST00000547204 CHURC1Q8WUH1 139 aa19.45■□□□□ 0.7
ARFGAP1-220ENST00000547204 SHISA4Q96DD7 197 aa19.45■□□□□ 0.7
ARFGAP1-220ENST00000547204 C12orf42Q96LP6 360 aa19.45■□□□□ 0.7
ARFGAP1-220ENST00000547204 PHF20Q9BVI0 1012 aa19.45■□□□□ 0.7
ARFGAP1-220ENST00000547204 ELP3Q9H9T3 547 aa19.45■□□□□ 0.7
ARFGAP1-220ENST00000547204 BARHL2Q9NY43 387 aa19.45■□□□□ 0.7
ARFGAP1-220ENST00000547204 FEM1BQ9UK73 627 aa19.45■□□□□ 0.7
ARFGAP1-220ENST00000547204 MANSC4A6NHS7 340 aaPredicted RBP19.44■□□□□ 0.7
ARFGAP1-220ENST00000547204 STXBP3O00186 592 aa19.44■□□□□ 0.7
ARFGAP1-220ENST00000547204 TBC1D8O95759 1140 aa19.44■□□□□ 0.7
ARFGAP1-220ENST00000547204 PPATQ06203 517 aa19.44■□□□□ 0.7
ARFGAP1-220ENST00000547204 ERO1BQ86YB8 467 aa19.44■□□□□ 0.7
ARFGAP1-220ENST00000547204 CCDC12Q8WUD4 166 aaPredicted RBP19.44■□□□□ 0.7
ARFGAP1-220ENST00000547204 MYH15Q9Y2K3 1946 aa19.43■□□□□ 0.7
ARFGAP1-220ENST00000547204 SPDYE5A6NIY4 337 aa19.43■□□□□ 0.7
ARFGAP1-220ENST00000547204 CCDC85CA6NKD9 419 aa19.43■□□□□ 0.7
ARFGAP1-220ENST00000547204 VCAM1P19320 739 aa19.43■□□□□ 0.7
ARFGAP1-220ENST00000547204 HMGCS2P54868 508 aa19.43■□□□□ 0.7
ARFGAP1-220ENST00000547204 NLRP5P59047 1200 aa19.43■□□□□ 0.7
ARFGAP1-220ENST00000547204 GNL2Q13823 731 aaKnown RBP19.43■□□□□ 0.7
ARFGAP1-220ENST00000547204 CDC37Q16543 378 aaPredicted RBP19.43■□□□□ 0.7
ARFGAP1-220ENST00000547204 BRAPQ7Z569 592 aa19.43■□□□□ 0.7
ARFGAP1-220ENST00000547204 DIS3L2Q8IYB7 885 aaKnown RBP19.43■□□□□ 0.7
ARFGAP1-220ENST00000547204 BRMS1Q9HCU9 246 aa19.43■□□□□ 0.7
ARFGAP1-220ENST00000547204 TMOD4Q9NZQ9 345 aa19.43■□□□□ 0.7
ARFGAP1-220ENST00000547204 PRR12Q9ULL5 1215 aa19.43■□□□□ 0.7
ARFGAP1-220ENST00000547204 KIF28PB7ZC32 967 aa19.42■□□□□ 0.7
ARFGAP1-220ENST00000547204 CALML3P27482 149 aa19.42■□□□□ 0.7
ARFGAP1-220ENST00000547204 KRT2P35908 639 aa19.42■□□□□ 0.7
ARFGAP1-220ENST00000547204 NAPAP54920 295 aa19.42■□□□□ 0.7
ARFGAP1-220ENST00000547204 QRICH1Q2TAL8 776 aa19.42■□□□□ 0.7
ARFGAP1-220ENST00000547204 FOXD4L6Q3SYB3 417 aaPredicted RBP19.42■□□□□ 0.7
ARFGAP1-220ENST00000547204 SH3D19Q5HYK7 790 aa19.42■□□□□ 0.7
ARFGAP1-220ENST00000547204 FOXD4L3Q6VB84 417 aaPredicted RBP19.42■□□□□ 0.7
ARFGAP1-220ENST00000547204 FOXP1Q9H334 677 aaPredicted RBP19.42■□□□□ 0.7
ARFGAP1-220ENST00000547204 U2AF2P26368 475 aaKnown RBP eCLIP19.41■□□□□ 0.72e-6■■□□□ 11.9
ARFGAP1-220ENST00000547204 GJA5P36382 358 aa19.41■□□□□ 0.7
ARFGAP1-220ENST00000547204 PPIL2Q13356 520 aa19.41■□□□□ 0.7
ARFGAP1-220ENST00000547204 GALNT17Q6IS24 598 aa19.41■□□□□ 0.7
ARFGAP1-220ENST00000547204 TYW1BQ6NUM6 668 aa19.41■□□□□ 0.7
ARFGAP1-220ENST00000547204 PPP1R18Q6NYC8 613 aa19.41■□□□□ 0.7
ARFGAP1-220ENST00000547204 ZNF296Q8WUU4 475 aaPredicted RBP19.41■□□□□ 0.7
ARFGAP1-220ENST00000547204 CNKSR2Q8WXI2 1034 aa19.41■□□□□ 0.7
ARFGAP1-220ENST00000547204 OTUD5Q96G74 571 aa19.41■□□□□ 0.7
ARFGAP1-220ENST00000547204 TANGO6Q9C0B7 1094 aa19.41■□□□□ 0.7
ARFGAP1-220ENST00000547204 RPAP3Q9H6T3 665 aaPredicted RBP19.41■□□□□ 0.7
ARFGAP1-220ENST00000547204 PTPRFP10586 1907 aa19.41■□□□□ 0.7
ARFGAP1-220ENST00000547204 LOC285556D6RIA3 1793 aa19.4■□□□□ 0.7
ARFGAP1-220ENST00000547204 BTBD18B2RXH4 712 aa19.4■□□□□ 0.7
ARFGAP1-220ENST00000547204 PPP1R11O60927 126 aaPredicted RBP19.4■□□□□ 0.7
ARFGAP1-220ENST00000547204 ALDH1A1P00352 501 aa19.4■□□□□ 0.7
ARFGAP1-220ENST00000547204 MCM4P33991 863 aa19.4■□□□□ 0.7
ARFGAP1-220ENST00000547204 INHBEP58166 350 aa19.4■□□□□ 0.7
ARFGAP1-220ENST00000547204 NFKBIBQ15653 356 aa19.4■□□□□ 0.7
ARFGAP1-220ENST00000547204 NPY5RQ15761 445 aa19.4■□□□□ 0.7
ARFGAP1-220ENST00000547204 FAM173BQ6P4H8 233 aa19.4■□□□□ 0.7
ARFGAP1-220ENST00000547204 CTU1Q7Z7A3 348 aaKnown RBP19.4■□□□□ 0.7
ARFGAP1-220ENST00000547204 IFNL1Q8IU54 200 aa19.4■□□□□ 0.7
ARFGAP1-220ENST00000547204 DAGLBQ8NCG7 672 aa19.4■□□□□ 0.7
ARFGAP1-220ENST00000547204 KIFC2Q96AC6 838 aa19.4■□□□□ 0.7
ARFGAP1-220ENST00000547204 CHAMP1Q96JM3 812 aa19.4■□□□□ 0.7
ARFGAP1-220ENST00000547204 SLF1Q9BQI6 1058 aa19.4■□□□□ 0.7
ARFGAP1-220ENST00000547204 CFHR5Q9BXR6 569 aa19.4■□□□□ 0.7
ARFGAP1-220ENST00000547204 PCDHA4Q9UN74 947 aa19.4■□□□□ 0.7
ARFGAP1-220ENST00000547204 ESYT2A0FGR8 921 aa19.39■□□□□ 0.69
ARFGAP1-220ENST00000547204 GOLGA6L22H0YM25 854 aa19.39■□□□□ 0.69
ARFGAP1-220ENST00000547204 GPR25O00155 361 aa19.39■□□□□ 0.69
ARFGAP1-220ENST00000547204 CXCL11O14625 94 aa19.39■□□□□ 0.69
ARFGAP1-220ENST00000547204 DNM1Q05193 864 aaKnown RBP19.39■□□□□ 0.69
ARFGAP1-220ENST00000547204 NOSTRINQ8IVI9 506 aa19.39■□□□□ 0.69
ARFGAP1-220ENST00000547204 PRPF38AQ8NAV1 312 aaKnown RBP19.39■□□□□ 0.69
ARFGAP1-220ENST00000547204 OXER1Q8TDS5 423 aa19.39■□□□□ 0.69
ARFGAP1-220ENST00000547204 COA7Q96BR5 231 aa19.39■□□□□ 0.69
ARFGAP1-220ENST00000547204 OPTNQ96CV9 577 aa19.39■□□□□ 0.69
ARFGAP1-220ENST00000547204 AMNQ9BXJ7 453 aa19.39■□□□□ 0.69
ARFGAP1-220ENST00000547204 ZMYND12Q9H0C1 365 aa19.39■□□□□ 0.69
ARFGAP1-220ENST00000547204 RANBP17Q9H2T7 1088 aaKnown RBP19.39■□□□□ 0.69
ARFGAP1-220ENST00000547204 C6orf50Q9HD87 102 aa19.39■□□□□ 0.69
ARFGAP1-220ENST00000547204 FBXO28Q9NVF7 368 aa19.39■□□□□ 0.69
ARFGAP1-220ENST00000547204 KCNH4Q9UQ05 1017 aa19.39■□□□□ 0.69
ARFGAP1-220ENST00000547204 IGF2BP3O00425 579 aaKnown RBP eCLIP19.38■□□□□ 0.69
ARFGAP1-220ENST00000547204 IRF6O14896 467 aa19.38■□□□□ 0.69
ARFGAP1-220ENST00000547204 FLOT1O75955 427 aa19.38■□□□□ 0.69
ARFGAP1-220ENST00000547204 NCLP19338 710 aaKnown RBP19.38■□□□□ 0.69
ARFGAP1-220ENST00000547204 KRT85P78386 507 aa19.38■□□□□ 0.69
ARFGAP1-220ENST00000547204 TRAF1Q13077 416 aa19.38■□□□□ 0.69
ARFGAP1-220ENST00000547204 NOM1Q5C9Z4 860 aaKnown RBP19.38■□□□□ 0.69
ARFGAP1-220ENST00000547204 ATL3Q6DD88 541 aa19.38■□□□□ 0.69
ARFGAP1-220ENST00000547204 FBXO11Q86XK2 927 aa19.38■□□□□ 0.69
ARFGAP1-220ENST00000547204 BLIDQ8IZY5 108 aa19.38■□□□□ 0.69
ARFGAP1-220ENST00000547204 ZNF396Q96N95 335 aaPredicted RBP19.38■□□□□ 0.69
ARFGAP1-220ENST00000547204 PPP1R9AQ9ULJ8 1098 aa19.38■□□□□ 0.69
ARFGAP1-220ENST00000547204 PARP14Q460N5 1801 aa19.37■□□□□ 0.69
ARFGAP1-220ENST00000547204 A0A0G2JLL6 359 aaPredicted RBP19.37■□□□□ 0.69
ARFGAP1-220ENST00000547204 SMCO2A6NFE2 343 aa19.37■□□□□ 0.69
ARFGAP1-220ENST00000547204 DDX11L8A8MPP1 907 aa19.37■□□□□ 0.69
ARFGAP1-220ENST00000547204 GNA11P29992 359 aa19.37■□□□□ 0.69
ARFGAP1-220ENST00000547204 SNAP25P60880 206 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms