RNA–Protein interactions for RNA: ENST00000546992.5

LETMD1-205, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-205ENST00000546992 PNMA3Q9UL41 463 aa18.93■□□□□ 0.62
LETMD1-205ENST00000546992 ZNF214Q9UL59 606 aaPredicted RBP18.93■□□□□ 0.62
LETMD1-205ENST00000546992 PLXNB2O15031 1838 aa18.93■□□□□ 0.62
LETMD1-205ENST00000546992 CPLX1O14810 134 aa18.92■□□□□ 0.62
LETMD1-205ENST00000546992 DHX16O60231 1041 aaKnown RBP18.92■□□□□ 0.62
LETMD1-205ENST00000546992 TMEM132BQ14DG7 1078 aa18.92■□□□□ 0.62
LETMD1-205ENST00000546992 CCDC174Q6PII3 467 aa18.92■□□□□ 0.62
LETMD1-205ENST00000546992 AIFM3Q96NN9 605 aa18.92■□□□□ 0.62
LETMD1-205ENST00000546992 PARK7Q99497 189 aaKnown RBP18.92■□□□□ 0.62
LETMD1-205ENST00000546992 RNF26Q9BY78 433 aaPredicted RBP18.92■□□□□ 0.62
LETMD1-205ENST00000546992 HOXC10Q9NYD6 342 aa18.92■□□□□ 0.62
LETMD1-205ENST00000546992 V9GY48 417 aaPredicted RBP18.92■□□□□ 0.62
LETMD1-205ENST00000546992 STK36Q9NRP7 1315 aa18.92■□□□□ 0.62
LETMD1-205ENST00000546992 PRPF3O43395 683 aaKnown RBP18.91■□□□□ 0.62
LETMD1-205ENST00000546992 CRHR2Q13324 411 aa18.91■□□□□ 0.62
LETMD1-205ENST00000546992 DDX11Q96FC9 970 aa18.91■□□□□ 0.62
LETMD1-205ENST00000546992 RAVER2Q9HCJ3 691 aaKnown RBP18.91■□□□□ 0.62
LETMD1-205ENST00000546992 FOXD4L1Q9NU39 408 aa18.91■□□□□ 0.62
LETMD1-205ENST00000546992 DOCK3Q8IZD9 2030 aa18.91■□□□□ 0.62
LETMD1-205ENST00000546992 ZNFX1Q9P2E3 1918 aaKnown RBP18.9■□□□□ 0.62
LETMD1-205ENST00000546992 ZBTB5O15062 677 aa18.9■□□□□ 0.62
LETMD1-205ENST00000546992 SLC4A3P48751 1232 aa18.9■□□□□ 0.62
LETMD1-205ENST00000546992 SSRP1Q08945 709 aaKnown RBP18.9■□□□□ 0.62
LETMD1-205ENST00000546992 TYW1BQ6NUM6 668 aa18.9■□□□□ 0.62
LETMD1-205ENST00000546992 REM2Q8IYK8 340 aaPredicted RBP18.9■□□□□ 0.62
LETMD1-205ENST00000546992 GPKOWQ92917 476 aaPredicted RBP eCLIP18.9■□□□□ 0.62
LETMD1-205ENST00000546992 RRP36Q96EU6 259 aaKnown RBP18.9■□□□□ 0.62
LETMD1-205ENST00000546992 AGBL1Q96MI9 1066 aa18.9■□□□□ 0.62
LETMD1-205ENST00000546992 LLPHQ9BRT6 129 aaKnown RBP18.9■□□□□ 0.62
LETMD1-205ENST00000546992 PAGR1Q9BTK6 254 aa18.9■□□□□ 0.62
LETMD1-205ENST00000546992 ORC3Q9UBD5 711 aaPredicted RBP18.9■□□□□ 0.62
LETMD1-205ENST00000546992 PNMA6FA0A0J9YX94 578 aa18.89■□□□□ 0.61
LETMD1-205ENST00000546992 BCRP11274 1271 aa18.89■□□□□ 0.61
LETMD1-205ENST00000546992 PFKFB3Q16875 520 aaPredicted RBP18.89■□□□□ 0.61
LETMD1-205ENST00000546992 Q3C1V9 767 aa18.89■□□□□ 0.61
LETMD1-205ENST00000546992 WWC2Q6AWC2 1192 aa18.89■□□□□ 0.61
LETMD1-205ENST00000546992 CPLX2Q6PUV4 134 aaKnown RBP18.89■□□□□ 0.61
LETMD1-205ENST00000546992 CPXCR1Q8N123 301 aa18.89■□□□□ 0.61
LETMD1-205ENST00000546992 SMCR8Q8TEV9 937 aaPredicted RBP18.89■□□□□ 0.61
LETMD1-205ENST00000546992 GJB4Q9NTQ9 266 aa18.89■□□□□ 0.61
LETMD1-205ENST00000546992 RNF186Q9NXI6 227 aa18.89■□□□□ 0.61
LETMD1-205ENST00000546992 CPA4Q9UI42 421 aa18.89■□□□□ 0.61
LETMD1-205ENST00000546992 RIPK3Q9Y572 518 aa18.89■□□□□ 0.61
LETMD1-205ENST00000546992 ATP2A1O14983 1001 aa18.88■□□□□ 0.61
LETMD1-205ENST00000546992 CA12O43570 354 aa18.88■□□□□ 0.61
LETMD1-205ENST00000546992 ZBED4O75132 1171 aa18.88■□□□□ 0.61
LETMD1-205ENST00000546992 CDKL5O76039 1030 aa18.88■□□□□ 0.61
LETMD1-205ENST00000546992 ICAM1P05362 532 aa18.88■□□□□ 0.61
LETMD1-205ENST00000546992 SCG2P13521 617 aa18.88■□□□□ 0.61
LETMD1-205ENST00000546992 ANP32AP39687 249 aaKnown RBP18.88■□□□□ 0.61
LETMD1-205ENST00000546992 OTUD7BQ6GQQ9 843 aa18.88■□□□□ 0.61
LETMD1-205ENST00000546992 C17orf99Q6UX52 265 aa18.88■□□□□ 0.61
LETMD1-205ENST00000546992 ANKRD13CQ8N6S4 541 aa18.88■□□□□ 0.61
LETMD1-205ENST00000546992 MB21D1Q8N884 522 aa18.88■□□□□ 0.61
LETMD1-205ENST00000546992 COA7Q96BR5 231 aa18.88■□□□□ 0.61
LETMD1-205ENST00000546992 MORF4L1Q9UBU8 362 aa18.88■□□□□ 0.61
LETMD1-205ENST00000546992 RABGAP1Q9Y3P9 1069 aa18.88■□□□□ 0.61
LETMD1-205ENST00000546992 STXBP3O00186 592 aa18.87■□□□□ 0.61
LETMD1-205ENST00000546992 OPLAHO14841 1288 aa18.87■□□□□ 0.61
LETMD1-205ENST00000546992 TLR2O60603 784 aa18.87■□□□□ 0.61
LETMD1-205ENST00000546992 FDX1P10109 184 aa18.87■□□□□ 0.61
LETMD1-205ENST00000546992 GJB2P29033 226 aa18.87■□□□□ 0.61
LETMD1-205ENST00000546992 GCLCP48506 637 aaPredicted RBP18.87■□□□□ 0.61
LETMD1-205ENST00000546992 ERVK-9P63128 1117 aa18.87■□□□□ 0.61
LETMD1-205ENST00000546992 ERVK-24P63145 666 aa18.87■□□□□ 0.61
LETMD1-205ENST00000546992 USH1GQ495M9 461 aa18.87■□□□□ 0.61
LETMD1-205ENST00000546992 FBXO11Q86XK2 927 aa18.87■□□□□ 0.61
LETMD1-205ENST00000546992 TRIM22Q8IYM9 498 aa18.87■□□□□ 0.61
LETMD1-205ENST00000546992 SPRYD3Q8NCJ5 442 aa18.87■□□□□ 0.61
LETMD1-205ENST00000546992 INTS4Q96HW7 963 aaKnown RBP18.87■□□□□ 0.61
LETMD1-205ENST00000546992 CFHR5Q9BXR6 569 aa18.87■□□□□ 0.61
LETMD1-205ENST00000546992 SPATC1LQ9H0A9 340 aa18.87■□□□□ 0.61
LETMD1-205ENST00000546992 ADAMTS3O15072 1205 aa18.86■□□□□ 0.61
LETMD1-205ENST00000546992 TRPA1O75762 1119 aa18.86■□□□□ 0.61
LETMD1-205ENST00000546992 DEXIO95424 95 aa18.86■□□□□ 0.61
LETMD1-205ENST00000546992 TBC1D8O95759 1140 aa18.86■□□□□ 0.61
LETMD1-205ENST00000546992 ALDH1A1P00352 501 aa18.86■□□□□ 0.61
LETMD1-205ENST00000546992 OAZ1P54368 228 aa18.86■□□□□ 0.61
LETMD1-205ENST00000546992 BECN1Q14457 450 aa18.86■□□□□ 0.61
LETMD1-205ENST00000546992 SNRNP48Q6IEG0 339 aaKnown RBP18.86■□□□□ 0.61
LETMD1-205ENST00000546992 HEATR3Q7Z4Q2 680 aa18.86■□□□□ 0.61
LETMD1-205ENST00000546992 GTF3C2Q8WUA4 911 aaPredicted RBP18.86■□□□□ 0.61
LETMD1-205ENST00000546992 MOV10L1Q9BXT6 1211 aaKnown RBP18.86■□□□□ 0.61
LETMD1-205ENST00000546992 TEX13BQ9BXU2 312 aa18.86■□□□□ 0.61
LETMD1-205ENST00000546992 PORCNQ9H237 461 aa18.86■□□□□ 0.61
LETMD1-205ENST00000546992 ZFYVE28Q9HCC9 887 aa18.86■□□□□ 0.61
LETMD1-205ENST00000546992 SEC63Q9UGP8 760 aaKnown RBP18.86■□□□□ 0.61
LETMD1-205ENST00000546992 CCPG1Q9ULG6 757 aa18.86■□□□□ 0.61
LETMD1-205ENST00000546992 PLXNA1Q9UIW2 1896 aa18.86■□□□□ 0.61
LETMD1-205ENST00000546992 STAT3P40763 770 aa18.85■□□□□ 0.61
LETMD1-205ENST00000546992 FOSBP53539 338 aa18.85■□□□□ 0.61
LETMD1-205ENST00000546992 PLS1Q14651 629 aa18.85■□□□□ 0.61
LETMD1-205ENST00000546992 FAM110CQ1W6H9 321 aa18.85■□□□□ 0.61
LETMD1-205ENST00000546992 MUM1L1Q5H9M0 696 aa18.85■□□□□ 0.61
LETMD1-205ENST00000546992 CLEC4DQ8WXI8 215 aa18.85■□□□□ 0.61
LETMD1-205ENST00000546992 AMNQ9BXJ7 453 aa18.85■□□□□ 0.61
LETMD1-205ENST00000546992 BARHL2Q9NY43 387 aa18.85■□□□□ 0.61
LETMD1-205ENST00000546992 VPS54Q9P1Q0 977 aa18.85■□□□□ 0.61
LETMD1-205ENST00000546992 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.85■□□□□ 0.61
LETMD1-205ENST00000546992 ZNF236Q9UL36 1845 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 154.8 ms