RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 MTMR8Q96EF0 704 aa16.87■□□□□ 0.29
DDX54-203ENST00000546869 LZTS2Q9BRK4 669 aa16.87■□□□□ 0.29
DDX54-203ENST00000546869 LRRC2Q9BYS8 371 aa16.87■□□□□ 0.29
DDX54-203ENST00000546869 UBA5Q9GZZ9 404 aa16.87■□□□□ 0.29
DDX54-203ENST00000546869 ALDH8A1Q9H2A2 487 aaPredicted RBP16.87■□□□□ 0.29
DDX54-203ENST00000546869 RIOX1Q9H6W3 641 aa16.87■□□□□ 0.29
DDX54-203ENST00000546869 CYP46A1Q9Y6A2 500 aa16.87■□□□□ 0.29
DDX54-203ENST00000546869 PTCH2Q9Y6C5 1203 aa16.87■□□□□ 0.29
DDX54-203ENST00000546869 FCER1AP12319 257 aa16.86■□□□□ 0.29
DDX54-203ENST00000546869 RGS2P41220 211 aa16.86■□□□□ 0.29
DDX54-203ENST00000546869 GNAQP50148 359 aa16.86■□□□□ 0.29
DDX54-203ENST00000546869 MAP2K5Q13163 448 aa16.86■□□□□ 0.29
DDX54-203ENST00000546869 PPP2R5BQ15173 497 aa16.86■□□□□ 0.29
DDX54-203ENST00000546869 SYNE3Q6ZMZ3 975 aa16.86■□□□□ 0.29
DDX54-203ENST00000546869 CPXCR1Q8N123 301 aa16.86■□□□□ 0.29
DDX54-203ENST00000546869 FANCBQ8NB91 859 aa16.86■□□□□ 0.29
DDX54-203ENST00000546869 SLAIN1Q8ND83 568 aa16.86■□□□□ 0.29
DDX54-203ENST00000546869 CTCFLQ8NI51 663 aaPredicted RBP16.86■□□□□ 0.29
DDX54-203ENST00000546869 RAET1EQ8TD07 263 aa16.86■□□□□ 0.29
DDX54-203ENST00000546869 CWC22Q9HCG8 908 aaKnown RBP16.86■□□□□ 0.29
DDX54-203ENST00000546869 HPS5Q9UPZ3 1129 aa16.86■□□□□ 0.29
DDX54-203ENST00000546869 RIPK3Q9Y572 518 aa16.86■□□□□ 0.29
DDX54-203ENST00000546869 MGAMO43451 1857 aa16.85■□□□□ 0.29
DDX54-203ENST00000546869 CPA1P15085 419 aa16.85■□□□□ 0.29
DDX54-203ENST00000546869 APOA5Q6Q788 366 aa16.85■□□□□ 0.29
DDX54-203ENST00000546869 Q6ZUG5 572 aa16.85■□□□□ 0.29
DDX54-203ENST00000546869 NBPF11Q86T75 865 aa16.85■□□□□ 0.29
DDX54-203ENST00000546869 ARMC5Q96C12 935 aa16.85■□□□□ 0.29
DDX54-203ENST00000546869 AGBL1Q96MI9 1066 aa16.85■□□□□ 0.29
DDX54-203ENST00000546869 TCEANC2Q96MN5 208 aa16.85■□□□□ 0.29
DDX54-203ENST00000546869 JMJD4Q9H9V9 463 aa16.85■□□□□ 0.29
DDX54-203ENST00000546869 SLC5A4Q9NY91 659 aa16.85■□□□□ 0.29
DDX54-203ENST00000546869 BRPF3Q9ULD4 1205 aa16.85■□□□□ 0.29
DDX54-203ENST00000546869 ADCY3O60266 1144 aa16.84■□□□□ 0.29
DDX54-203ENST00000546869 ECM2O94769 699 aaPredicted RBP16.84■□□□□ 0.29
DDX54-203ENST00000546869 GRK4P32298 578 aa16.84■□□□□ 0.29
DDX54-203ENST00000546869 FGD1P98174 961 aa16.84■□□□□ 0.29
DDX54-203ENST00000546869 KCTD2Q14681 263 aa16.84■□□□□ 0.29
DDX54-203ENST00000546869 WDR78Q5VTH9 848 aa16.84■□□□□ 0.29
DDX54-203ENST00000546869 NUP133Q8WUM0 1156 aa16.84■□□□□ 0.29
DDX54-203ENST00000546869 SPZ1Q9BXG8 430 aa16.84■□□□□ 0.29
DDX54-203ENST00000546869 DIS3Q9Y2L1 958 aaKnown RBP16.84■□□□□ 0.29
DDX54-203ENST00000546869 ZSWIM8A7E2V4 1837 aa16.83■□□□□ 0.28
DDX54-203ENST00000546869 ZBTB5O15062 677 aa16.83■□□□□ 0.28
DDX54-203ENST00000546869 ZBTB43O43298 467 aa16.83■□□□□ 0.28
DDX54-203ENST00000546869 IGHA2P01877 340 aa16.83■□□□□ 0.28
DDX54-203ENST00000546869 ADORA2AP29274 412 aa16.83■□□□□ 0.28
DDX54-203ENST00000546869 TRAF1Q13077 416 aa16.83■□□□□ 0.28
DDX54-203ENST00000546869 CDC37Q16543 378 aaPredicted RBP16.83■□□□□ 0.28
DDX54-203ENST00000546869 CCDC174Q6PII3 467 aa16.83■□□□□ 0.28
DDX54-203ENST00000546869 RGS22Q8NE09 1264 aa16.83■□□□□ 0.28
DDX54-203ENST00000546869 BRF1Q92994 677 aa16.83■□□□□ 0.28
DDX54-203ENST00000546869 ABHD8Q96I13 439 aa16.83■□□□□ 0.28
DDX54-203ENST00000546869 TRERF1Q96PN7 1200 aa16.83■□□□□ 0.28
DDX54-203ENST00000546869 MMP19Q99542 508 aa16.83■□□□□ 0.28
DDX54-203ENST00000546869 APBA2Q99767 749 aa16.83■□□□□ 0.28
DDX54-203ENST00000546869 MYL10Q9BUA6 226 aa16.83■□□□□ 0.28
DDX54-203ENST00000546869 CPVLQ9H3G5 476 aa16.83■□□□□ 0.28
DDX54-203ENST00000546869 ACAD9Q9H845 621 aa16.83■□□□□ 0.28
DDX54-203ENST00000546869 RBM28Q9NW13 759 aaKnown RBP16.83■□□□□ 0.28
DDX54-203ENST00000546869 CCPG1Q9ULG6 757 aa16.83■□□□□ 0.28
DDX54-203ENST00000546869 KLF18A0A0U1RQI7 1052 aa16.82■□□□□ 0.28
DDX54-203ENST00000546869 CYTH3O43739 400 aa16.82■□□□□ 0.28
DDX54-203ENST00000546869 RBM25P49756 843 aaKnown RBP16.82■□□□□ 0.28
DDX54-203ENST00000546869 SNAP25P60880 206 aa16.82■□□□□ 0.28
DDX54-203ENST00000546869 SLC35G1Q2M3R5 365 aa16.82■□□□□ 0.28
DDX54-203ENST00000546869 QRICH1Q2TAL8 776 aa16.82■□□□□ 0.28
DDX54-203ENST00000546869 SLC9C1Q4G0N8 1177 aa16.82■□□□□ 0.28
DDX54-203ENST00000546869 IL27Q8NEV9 243 aa16.82■□□□□ 0.28
DDX54-203ENST00000546869 COL11A1P12107 1806 aaPredicted RBP16.82■□□□□ 0.28
DDX54-203ENST00000546869 NID2Q14112 1375 aa16.81■□□□□ 0.28
DDX54-203ENST00000546869 DNAJC25-GNG10A0A024R161 153 aa16.81■□□□□ 0.28
DDX54-203ENST00000546869 PNMA6FA0A0J9YX94 578 aa16.81■□□□□ 0.28
DDX54-203ENST00000546869 CCDC196A0A1B0GTZ2 297 aa16.81■□□□□ 0.28
DDX54-203ENST00000546869 COBLO75128 1261 aa16.81■□□□□ 0.28
DDX54-203ENST00000546869 ALAS1P13196 640 aa16.81■□□□□ 0.28
DDX54-203ENST00000546869 CYP2B6P20813 491 aa16.81■□□□□ 0.28
DDX54-203ENST00000546869 TOB2Q14106 344 aaPredicted RBP16.81■□□□□ 0.28
DDX54-203ENST00000546869 ZNF792Q3KQV3 632 aa16.81■□□□□ 0.28
DDX54-203ENST00000546869 OLFML2BQ68BL8 750 aa16.81■□□□□ 0.28
DDX54-203ENST00000546869 DPP9Q86TI2 863 aa16.81■□□□□ 0.28
DDX54-203ENST00000546869 ZNF274Q96GC6 653 aaPredicted RBP16.81■□□□□ 0.28
DDX54-203ENST00000546869 ZNF333Q96JL9 665 aa16.81■□□□□ 0.28
DDX54-203ENST00000546869 AMNQ9BXJ7 453 aa16.81■□□□□ 0.28
DDX54-203ENST00000546869 UPF3BQ9BZI7 483 aaKnown RBP16.81■□□□□ 0.28
DDX54-203ENST00000546869 VAT1LQ9HCJ6 419 aa16.81■□□□□ 0.28
DDX54-203ENST00000546869 RNF146Q9NTX7 359 aa16.81■□□□□ 0.28
DDX54-203ENST00000546869 PDRG1Q9NUG6 133 aa16.81■□□□□ 0.28
DDX54-203ENST00000546869 ZNF236Q9UL36 1845 aa16.81■□□□□ 0.28
DDX54-203ENST00000546869 PFASO15067 1338 aa16.8■□□□□ 0.28
DDX54-203ENST00000546869 ABCB11O95342 1321 aa16.8■□□□□ 0.28
DDX54-203ENST00000546869 DHX16O60231 1041 aaKnown RBP16.8■□□□□ 0.28
DDX54-203ENST00000546869 HMGCRP04035 888 aa16.8■□□□□ 0.28
DDX54-203ENST00000546869 APOBRQ0VD83 1088 aa16.8■□□□□ 0.28
DDX54-203ENST00000546869 TMTC3Q6ZXV5 915 aa16.8■□□□□ 0.28
DDX54-203ENST00000546869 MICU3Q86XE3 530 aa16.8■□□□□ 0.28
DDX54-203ENST00000546869 FBXO11Q86XK2 927 aa16.8■□□□□ 0.28
DDX54-203ENST00000546869 ANKRD35Q8N283 1001 aa16.8■□□□□ 0.28
DDX54-203ENST00000546869 SRBD1Q8N5C6 995 aaKnown RBP16.8■□□□□ 0.28
DDX54-203ENST00000546869 MSL3Q8N5Y2 521 aaKnown RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms