RNA–Protein interactions for RNA: ENST00000546318.2

IFIT1-202, Transcript of interferon induced protein with tetratricopeptide repeats 1, humanhuman

TSL 3 BASIC

Gene IFIT1, Length 4,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFIT1-202ENST00000546318 TRIM14Q14142 442 aa7.4□□□□□ -1.23
IFIT1-202ENST00000546318 IL17AQ16552 155 aa7.4□□□□□ -1.23
IFIT1-202ENST00000546318 GPATCH4Q5T3I0 446 aaKnown RBP7.4□□□□□ -1.23
IFIT1-202ENST00000546318 CALML4Q96GE6 196 aa7.4□□□□□ -1.23
IFIT1-202ENST00000546318 CCDC17Q96LX7 622 aa7.4□□□□□ -1.23
IFIT1-202ENST00000546318 BAG1Q99933 345 aaPredicted RBP7.4□□□□□ -1.23
IFIT1-202ENST00000546318 CCSER1Q9C0I3 900 aa7.4□□□□□ -1.23
IFIT1-202ENST00000546318 GLT8D2Q9H1C3 349 aa7.4□□□□□ -1.23
IFIT1-202ENST00000546318 DHX36Q9H2U1 1008 aaKnown RBP7.4□□□□□ -1.23
IFIT1-202ENST00000546318 PPP1R3GB7ZBB8 358 aa7.39□□□□□ -1.23
IFIT1-202ENST00000546318 CTIFO43310 598 aaKnown RBP7.39□□□□□ -1.23
IFIT1-202ENST00000546318 MMP10P09238 476 aa7.39□□□□□ -1.23
IFIT1-202ENST00000546318 GABPAQ06546 454 aa7.39□□□□□ -1.23
IFIT1-202ENST00000546318 LETM2Q2VYF4 491 aa7.39□□□□□ -1.23
IFIT1-202ENST00000546318 NOC3LQ8WTT2 800 aaKnown RBP7.39□□□□□ -1.23
IFIT1-202ENST00000546318 RIOX1Q9H6W3 641 aa7.39□□□□□ -1.23
IFIT1-202ENST00000546318 SAMSN1Q9NSI8 373 aaKnown RBP7.39□□□□□ -1.23
IFIT1-202ENST00000546318 FRMPD2Q68DX3 1309 aaPredicted RBP7.39□□□□□ -1.23
IFIT1-202ENST00000546318 IGKV6D-41A0A0C4DH26 115 aa7.39□□□□□ -1.23
IFIT1-202ENST00000546318 TMEM232C9JQI7 657 aa7.39□□□□□ -1.23
IFIT1-202ENST00000546318 H0YIN7 160 aa7.39□□□□□ -1.23
IFIT1-202ENST00000546318 STX10O60499 249 aa7.39□□□□□ -1.23
IFIT1-202ENST00000546318 TBX2Q13207 712 aaPredicted RBP7.39□□□□□ -1.23
IFIT1-202ENST00000546318 KCNB1Q14721 858 aa7.39□□□□□ -1.23
IFIT1-202ENST00000546318 KARSQ15046 597 aaKnown RBP7.39□□□□□ -1.23
IFIT1-202ENST00000546318 DOK7Q18PE1 504 aa7.39□□□□□ -1.23
IFIT1-202ENST00000546318 CCDC96Q2M329 555 aa7.39□□□□□ -1.23
IFIT1-202ENST00000546318 TYW1BQ6NUM6 668 aa7.39□□□□□ -1.23
IFIT1-202ENST00000546318 CABP7Q86V35 215 aa7.39□□□□□ -1.23
IFIT1-202ENST00000546318 C2CD5Q86YS7 1000 aa7.39□□□□□ -1.23
IFIT1-202ENST00000546318 LRRC47Q8N1G4 583 aaKnown RBP7.39□□□□□ -1.23
IFIT1-202ENST00000546318 NELFBQ8WX92 580 aa7.39□□□□□ -1.23
IFIT1-202ENST00000546318 AKR1B15C9JRZ8 316 aaPredicted RBP7.39□□□□□ -1.23
IFIT1-202ENST00000546318 HOXA7P31268 230 aaPredicted RBP7.39□□□□□ -1.23
IFIT1-202ENST00000546318 CRKP46108 304 aa7.39□□□□□ -1.23
IFIT1-202ENST00000546318 CDKAL1Q5VV42 579 aa7.39□□□□□ -1.23
IFIT1-202ENST00000546318 CDK5RAP3Q96JB5 506 aa7.39□□□□□ -1.23
IFIT1-202ENST00000546318 TMX1Q9H3N1 280 aa7.39□□□□□ -1.23
IFIT1-202ENST00000546318 VAT1LQ9HCJ6 419 aa7.39□□□□□ -1.23
IFIT1-202ENST00000546318 MAGEC2Q9UBF1 373 aaPredicted RBP7.39□□□□□ -1.23
IFIT1-202ENST00000546318 PHLPP2Q6ZVD8 1323 aa7.39□□□□□ -1.23
IFIT1-202ENST00000546318 PNMA6FA0A0J9YX94 578 aa7.39□□□□□ -1.23
IFIT1-202ENST00000546318 SNHG28P0DPA3 235 aa7.39□□□□□ -1.23
IFIT1-202ENST00000546318 AKR1B1P15121 316 aa7.39□□□□□ -1.23
IFIT1-202ENST00000546318 SCNN1DP51172 638 aa7.39□□□□□ -1.23
IFIT1-202ENST00000546318 NR1I3Q14994 352 aa7.39□□□□□ -1.23
IFIT1-202ENST00000546318 HSP90AA4PQ58FG1 418 aa7.39□□□□□ -1.23
IFIT1-202ENST00000546318 E4F1Q66K89 784 aaPredicted RBP7.39□□□□□ -1.23
IFIT1-202ENST00000546318 CDC42EP5Q6NZY7 148 aa7.39□□□□□ -1.23
IFIT1-202ENST00000546318 SUPT20HQ8NEM7 779 aa7.39□□□□□ -1.23
IFIT1-202ENST00000546318 CCDC51Q96ER9 411 aa7.39□□□□□ -1.23
IFIT1-202ENST00000546318 PANX2Q96RD6 677 aa7.39□□□□□ -1.23
IFIT1-202ENST00000546318 MRIQ9BWK5 157 aa7.39□□□□□ -1.23
IFIT1-202ENST00000546318 LRRC27Q9C0I9 530 aa7.39□□□□□ -1.23
IFIT1-202ENST00000546318 EXOC1Q9NV70 894 aa7.39□□□□□ -1.23
IFIT1-202ENST00000546318 ITIH6Q6UXX5 1313 aa7.39□□□□□ -1.23
IFIT1-202ENST00000546318 A0A0U1RQG5 324 aaPredicted RBP7.38□□□□□ -1.23
IFIT1-202ENST00000546318 PSMA7O14818 248 aa7.38□□□□□ -1.23
IFIT1-202ENST00000546318 VEGFAP15692 232 aaPredicted RBP7.38□□□□□ -1.23
IFIT1-202ENST00000546318 STX17P56962 302 aa7.38□□□□□ -1.23
IFIT1-202ENST00000546318 HDLBPQ00341 1268 aaKnown RBP7.38□□□□□ -1.23
IFIT1-202ENST00000546318 SLC35G1Q2M3R5 365 aa7.38□□□□□ -1.23
IFIT1-202ENST00000546318 STRIP1Q5VSL9 837 aa7.38□□□□□ -1.23
IFIT1-202ENST00000546318 CNGA4Q8IV77 575 aa7.38□□□□□ -1.23
IFIT1-202ENST00000546318 PROM2Q8N271 834 aa7.38□□□□□ -1.23
IFIT1-202ENST00000546318 CERS5Q8N5B7 392 aa7.38□□□□□ -1.23
IFIT1-202ENST00000546318 DCAF4Q8WV16 495 aa7.38□□□□□ -1.23
IFIT1-202ENST00000546318 CUL5Q93034 780 aa7.38□□□□□ -1.23
IFIT1-202ENST00000546318 ZDHHC15Q96MV8 337 aa7.38□□□□□ -1.23
IFIT1-202ENST00000546318 ADAMTSL1Q8N6G6 1762 aa7.38□□□□□ -1.23
IFIT1-202ENST00000546318 GREB1LQ9C091 1923 aaPredicted RBP7.38□□□□□ -1.23
IFIT1-202ENST00000546318 BICDL2A1A5D9 508 aa7.38□□□□□ -1.23
IFIT1-202ENST00000546318 CD44P16070 742 aaKnown RBP7.38□□□□□ -1.23
IFIT1-202ENST00000546318 RBM5P52756 815 aaKnown RBP eCLIP7.38□□□□□ -1.23
IFIT1-202ENST00000546318 CALCRLQ16602 461 aa7.38□□□□□ -1.23
IFIT1-202ENST00000546318 FAM114A1Q8IWE2 563 aa7.38□□□□□ -1.23
IFIT1-202ENST00000546318 TBCKQ8TEA7 893 aa7.38□□□□□ -1.23
IFIT1-202ENST00000546318 GPCPD1Q9NPB8 672 aa7.38□□□□□ -1.23
IFIT1-202ENST00000546318 RIC8AQ9NPQ8 531 aa7.38□□□□□ -1.23
IFIT1-202ENST00000546318 INTS13Q9NVM9 706 aa7.38□□□□□ -1.23
IFIT1-202ENST00000546318 BIN2Q9UBW5 565 aaPredicted RBP7.38□□□□□ -1.23
IFIT1-202ENST00000546318 TNS1Q9HBL0 1735 aaKnown RBP7.38□□□□□ -1.23
IFIT1-202ENST00000546318 IGSF22Q8N9C0 903 aa7.38□□□□□ -1.23
IFIT1-202ENST00000546318 CNKSR1Q969H4 720 aa7.38□□□□□ -1.23
IFIT1-202ENST00000546318 DDX4Q9NQI0 724 aaKnown RBP7.38□□□□□ -1.23
IFIT1-202ENST00000546318 LIMA1Q9UHB6 759 aaKnown RBP7.38□□□□□ -1.23
IFIT1-202ENST00000546318 ECE2O60344 883 aa7.37□□□□□ -1.23
IFIT1-202ENST00000546318 ZNF543Q08ER8 600 aa7.37□□□□□ -1.23
IFIT1-202ENST00000546318 JAKMIP3Q5VZ66 844 aa7.37□□□□□ -1.23
IFIT1-202ENST00000546318 SMYD4Q8IYR2 804 aaPredicted RBP7.37□□□□□ -1.23
IFIT1-202ENST00000546318 TMEM60Q9H2L4 133 aa7.37□□□□□ -1.23
IFIT1-202ENST00000546318 THAP9Q9H5L6 903 aa7.37□□□□□ -1.23
IFIT1-202ENST00000546318 CGNQ9P2M7 1197 aaKnown RBP7.37□□□□□ -1.23
IFIT1-202ENST00000546318 KCNJ18B7U540 433 aa7.37□□□□□ -1.23
IFIT1-202ENST00000546318 H7C1D1 291 aa7.37□□□□□ -1.23
IFIT1-202ENST00000546318 CASP1P29466 404 aa7.37□□□□□ -1.23
IFIT1-202ENST00000546318 SHMT1P34896 483 aa7.37□□□□□ -1.23
IFIT1-202ENST00000546318 EIF6P56537 245 aaKnown RBP7.37□□□□□ -1.23
IFIT1-202ENST00000546318 ATP2B2Q01814 1243 aa7.37□□□□□ -1.23
IFIT1-202ENST00000546318 KCNJ12Q14500 433 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms