RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.94□□□□□ -0.66
TRAF1-203ENST00000546084 KRT31Q15323 416 aa10.94□□□□□ -0.66
TRAF1-203ENST00000546084 SLC30A10Q6XR72 485 aa10.94□□□□□ -0.66
TRAF1-203ENST00000546084 KRT26Q7Z3Y9 468 aa10.94□□□□□ -0.66
TRAF1-203ENST00000546084 TRIM31Q9BZY9 425 aa10.94□□□□□ -0.66
TRAF1-203ENST00000546084 C6orf50Q9HD87 102 aa10.94□□□□□ -0.66
TRAF1-203ENST00000546084 FBXO2Q9UK22 296 aaPredicted RBP10.94□□□□□ -0.66
TRAF1-203ENST00000546084 TTF2Q9UNY4 1162 aaKnown RBP10.94□□□□□ -0.66
TRAF1-203ENST00000546084 SMIM23A6NLE4 172 aa10.94□□□□□ -0.66
TRAF1-203ENST00000546084 CALML3P27482 149 aa10.94□□□□□ -0.66
TRAF1-203ENST00000546084 KLK7P49862 253 aa10.94□□□□□ -0.66
TRAF1-203ENST00000546084 FXR1P51114 621 aaKnown RBP eCLIP10.94□□□□□ -0.66
TRAF1-203ENST00000546084 NKX1-1Q15270 411 aaPredicted RBP10.94□□□□□ -0.66
TRAF1-203ENST00000546084 HDXQ7Z353 690 aa10.94□□□□□ -0.66
TRAF1-203ENST00000546084 CEP112Q8N8E3 955 aa10.94□□□□□ -0.66
TRAF1-203ENST00000546084 SMARCC1Q92922 1105 aaPredicted RBP10.94□□□□□ -0.66
TRAF1-203ENST00000546084 HSD3B7Q9H2F3 369 aa10.94□□□□□ -0.66
TRAF1-203ENST00000546084 RASSF4Q9H2L5 321 aa10.94□□□□□ -0.66
TRAF1-203ENST00000546084 FOXP1Q9H334 677 aaPredicted RBP10.94□□□□□ -0.66
TRAF1-203ENST00000546084 A0A087X0B3 334 aa10.94□□□□□ -0.66
TRAF1-203ENST00000546084 TRIM66O15016 1216 aa10.94□□□□□ -0.66
TRAF1-203ENST00000546084 FANCGO15287 622 aa10.94□□□□□ -0.66
TRAF1-203ENST00000546084 FCER1AP12319 257 aa10.94□□□□□ -0.66
TRAF1-203ENST00000546084 BMP6P22004 513 aa10.94□□□□□ -0.66
TRAF1-203ENST00000546084 PRCPP42785 496 aa10.94□□□□□ -0.66
TRAF1-203ENST00000546084 CT47A1Q5JQC4 288 aaPredicted RBP10.94□□□□□ -0.66
TRAF1-203ENST00000546084 SPATA1Q5VX52 437 aa10.94□□□□□ -0.66
TRAF1-203ENST00000546084 TSPYL1Q9H0U9 437 aa10.94□□□□□ -0.66
TRAF1-203ENST00000546084 ACBD3Q9H3P7 528 aa10.94□□□□□ -0.66
TRAF1-203ENST00000546084 SMARCAL1Q9NZC9 954 aa10.94□□□□□ -0.66
TRAF1-203ENST00000546084 SRPRBQ9Y5M8 271 aaKnown RBP10.94□□□□□ -0.66
TRAF1-203ENST00000546084 FMN2Q9NZ56 1722 aa10.93□□□□□ -0.66
TRAF1-203ENST00000546084 ZEB2O60315 1214 aa10.93□□□□□ -0.66
TRAF1-203ENST00000546084 TRIM37O94972 964 aa10.93□□□□□ -0.66
TRAF1-203ENST00000546084 PTPAQ15257 358 aa10.93□□□□□ -0.66
TRAF1-203ENST00000546084 ODF2Q5BJF6 829 aa10.93□□□□□ -0.66
TRAF1-203ENST00000546084 HERC4Q5GLZ8 1057 aaPredicted RBP10.93□□□□□ -0.66
TRAF1-203ENST00000546084 KRT79Q5XKE5 535 aa10.93□□□□□ -0.66
TRAF1-203ENST00000546084 SRGAP1Q7Z6B7 1085 aa10.93□□□□□ -0.66
TRAF1-203ENST00000546084 DNAAF5Q86Y56 855 aa10.93□□□□□ -0.66
TRAF1-203ENST00000546084 TBCKQ8TEA7 893 aa10.93□□□□□ -0.66
TRAF1-203ENST00000546084 SPAG5Q96R06 1193 aa10.93□□□□□ -0.66
TRAF1-203ENST00000546084 HOMER2Q9NSB8 354 aa10.93□□□□□ -0.66
TRAF1-203ENST00000546084 TACC3Q9Y6A5 838 aa10.93□□□□□ -0.66
TRAF1-203ENST00000546084 GDF11O95390 407 aa10.93□□□□□ -0.66
TRAF1-203ENST00000546084 COPB1P53618 953 aaKnown RBP10.93□□□□□ -0.66
TRAF1-203ENST00000546084 KIF5AQ12840 1032 aa10.93□□□□□ -0.66
TRAF1-203ENST00000546084 CNGA4Q8IV77 575 aa10.93□□□□□ -0.66
TRAF1-203ENST00000546084 CTAGE1Q96RT6 745 aa10.93□□□□□ -0.66
TRAF1-203ENST00000546084 CEP89Q96ST8 783 aa10.93□□□□□ -0.66
TRAF1-203ENST00000546084 SH2D3AQ9BRG2 576 aa10.93□□□□□ -0.66
TRAF1-203ENST00000546084 CCDC113Q9H0I3 377 aa10.93□□□□□ -0.66
TRAF1-203ENST00000546084 TMEM60Q9H2L4 133 aa10.93□□□□□ -0.66
TRAF1-203ENST00000546084 INTS13Q9NVM9 706 aa10.93□□□□□ -0.66
TRAF1-203ENST00000546084 USP21Q9UK80 565 aa10.93□□□□□ -0.66
TRAF1-203ENST00000546084 CCDC151A5D8V7 595 aa10.93□□□□□ -0.66
TRAF1-203ENST00000546084 SFI1A8K8P3 1242 aa10.93□□□□□ -0.66
TRAF1-203ENST00000546084 TMEM110-MUSTN1A8MSY1 372 aa10.93□□□□□ -0.66
TRAF1-203ENST00000546084 ATP8B1O43520 1251 aa10.93□□□□□ -0.66
TRAF1-203ENST00000546084 PLCG1P19174 1290 aa10.93□□□□□ -0.66
TRAF1-203ENST00000546084 SLC7A5Q01650 507 aa10.93□□□□□ -0.66
TRAF1-203ENST00000546084 NTRK3Q16288 839 aa10.93□□□□□ -0.66
TRAF1-203ENST00000546084 GRIK5Q16478 980 aa10.93□□□□□ -0.66
TRAF1-203ENST00000546084 RNF26Q9BY78 433 aaPredicted RBP10.93□□□□□ -0.66
TRAF1-203ENST00000546084 RBM28Q9NW13 759 aaKnown RBP10.93□□□□□ -0.66
TRAF1-203ENST00000546084 GGA1Q9UJY5 639 aa10.93□□□□□ -0.66
TRAF1-203ENST00000546084 FAN1Q9Y2M0 1017 aa10.93□□□□□ -0.66
TRAF1-203ENST00000546084 USP17L5A8MUK1 530 aa10.92□□□□□ -0.66
TRAF1-203ENST00000546084 CAMTA2O94983 1202 aa10.92□□□□□ -0.66
TRAF1-203ENST00000546084 ABL1P00519 1130 aa10.92□□□□□ -0.66
TRAF1-203ENST00000546084 NONOQ15233 471 aaKnown RBP eCLIP10.92□□□□□ -0.66
TRAF1-203ENST00000546084 TAX1BP1Q86VP1 789 aa10.92□□□□□ -0.66
TRAF1-203ENST00000546084 REXO1Q8N1G1 1221 aaKnown RBP10.92□□□□□ -0.66
TRAF1-203ENST00000546084 ENOX1Q8TC92 643 aaKnown RBP10.92□□□□□ -0.66
TRAF1-203ENST00000546084 ARHGEF1Q92888 912 aaKnown RBP10.92□□□□□ -0.66
TRAF1-203ENST00000546084 ZNF287Q9HBT7 754 aa10.92□□□□□ -0.66
TRAF1-203ENST00000546084 ABCB6Q9NP58 842 aa10.92□□□□□ -0.66
TRAF1-203ENST00000546084 CDC23Q9UJX2 597 aa10.92□□□□□ -0.66
TRAF1-203ENST00000546084 HPSEQ9Y251 543 aa10.92□□□□□ -0.66
TRAF1-203ENST00000546084 SSR1P43307 286 aaKnown RBP10.92□□□□□ -0.66
TRAF1-203ENST00000546084 BRD3Q15059 726 aa10.92□□□□□ -0.66
TRAF1-203ENST00000546084 INTS5Q6P9B9 1019 aaKnown RBP10.92□□□□□ -0.66
TRAF1-203ENST00000546084 RAD9BQ6WBX8 426 aa10.92□□□□□ -0.66
TRAF1-203ENST00000546084 ZNF34Q8IZ26 560 aa10.92□□□□□ -0.66
TRAF1-203ENST00000546084 LINC00116Q8NCU8 138 aa10.92□□□□□ -0.66
TRAF1-203ENST00000546084 STAG1Q8WVM7 1258 aa10.92□□□□□ -0.66
TRAF1-203ENST00000546084 NAPGQ99747 312 aaPredicted RBP10.92□□□□□ -0.66
TRAF1-203ENST00000546084 FUT8Q9BYC5 575 aa10.92□□□□□ -0.66
TRAF1-203ENST00000546084 GOPCQ9HD26 462 aa10.92□□□□□ -0.66
TRAF1-203ENST00000546084 USP40Q9NVE5 1235 aa10.92□□□□□ -0.66
TRAF1-203ENST00000546084 HGSO14964 777 aaPredicted RBP10.92□□□□□ -0.66
TRAF1-203ENST00000546084 ADAMTS3O15072 1205 aa10.92□□□□□ -0.66
TRAF1-203ENST00000546084 UBE4AQ14139 1066 aa10.92□□□□□ -0.66
TRAF1-203ENST00000546084 CALCRLQ16602 461 aa10.92□□□□□ -0.66
TRAF1-203ENST00000546084 FAM43BQ6ZT52 329 aaPredicted RBP10.92□□□□□ -0.66
TRAF1-203ENST00000546084 CPXCR1Q8N123 301 aa10.92□□□□□ -0.66
TRAF1-203ENST00000546084 JAKMIP2Q96AA8 810 aa10.92□□□□□ -0.66
TRAF1-203ENST00000546084 RMND1Q9NWS8 449 aa10.92□□□□□ -0.66
TRAF1-203ENST00000546084 FAM53CQ9NYF3 392 aa10.92□□□□□ -0.66
TRAF1-203ENST00000546084 USP17L15C9J2P7 530 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms