RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 MCM7P33993 719 aa9.81□□□□□ -0.84
TDP1-204ENST00000545686 EVA1CP58658 441 aa9.81□□□□□ -0.84
TDP1-204ENST00000545686 FIGNQ5HY92 759 aa9.81□□□□□ -0.84
TDP1-204ENST00000545686 CCDC70Q6NSX1 233 aa9.81□□□□□ -0.84
TDP1-204ENST00000545686 LRRC31Q6UY01 552 aa9.81□□□□□ -0.84
TDP1-204ENST00000545686 FAM114A1Q8IWE2 563 aa9.81□□□□□ -0.84
TDP1-204ENST00000545686 SRBD1Q8N5C6 995 aaKnown RBP9.81□□□□□ -0.84
TDP1-204ENST00000545686 DHTKD1Q96HY7 919 aaPredicted RBP9.81□□□□□ -0.84
TDP1-204ENST00000545686 MMS19Q96T76 1030 aa9.81□□□□□ -0.84
TDP1-204ENST00000545686 CUEDC2Q9H467 287 aa9.81□□□□□ -0.84
TDP1-204ENST00000545686 ZNHIT6Q9NWK9 470 aaKnown RBP9.81□□□□□ -0.84
TDP1-204ENST00000545686 A0A1W2PQJ5 194 aa9.8□□□□□ -0.84
TDP1-204ENST00000545686 SNAP23O00161 211 aa9.8□□□□□ -0.84
TDP1-204ENST00000545686 LAD1O00515 517 aa9.8□□□□□ -0.84
TDP1-204ENST00000545686 TRIM66O15016 1216 aa9.8□□□□□ -0.84
TDP1-204ENST00000545686 SHOX2O60902 331 aaPredicted RBP9.8□□□□□ -0.84
TDP1-204ENST00000545686 KIF5BP33176 963 aa9.8□□□□□ -0.84
TDP1-204ENST00000545686 ZBED6P86452 979 aa9.8□□□□□ -0.84
TDP1-204ENST00000545686 CHRNDQ07001 517 aa9.8□□□□□ -0.84
TDP1-204ENST00000545686 SUSD4Q5VX71 490 aa9.8□□□□□ -0.84
TDP1-204ENST00000545686 ZNF572Q7Z3I7 529 aaPredicted RBP9.8□□□□□ -0.84
TDP1-204ENST00000545686 GIMAP8Q8ND71 665 aaPredicted RBP9.8□□□□□ -0.84
TDP1-204ENST00000545686 FAM107BQ9H098 131 aa9.8□□□□□ -0.84
TDP1-204ENST00000545686 EXOC1Q9NV70 894 aa9.8□□□□□ -0.84
TDP1-204ENST00000545686 TRIM10Q9UDY6 481 aa9.8□□□□□ -0.84
TDP1-204ENST00000545686 MYH14Q7Z406 1995 aaKnown RBP9.8□□□□□ -0.84
TDP1-204ENST00000545686 BICDL2A1A5D9 508 aa9.8□□□□□ -0.84
TDP1-204ENST00000545686 TNNT3P45378 269 aaPredicted RBP9.8□□□□□ -0.84
TDP1-204ENST00000545686 CORO7P57737 925 aa9.8□□□□□ -0.84
TDP1-204ENST00000545686 TTI2Q6NXR4 508 aa9.8□□□□□ -0.84
TDP1-204ENST00000545686 BLIDQ8IZY5 108 aa9.8□□□□□ -0.84
TDP1-204ENST00000545686 TRIM47Q96LD4 638 aa9.8□□□□□ -0.84
TDP1-204ENST00000545686 CRACR2AQ9BSW2 395 aa9.8□□□□□ -0.84
TDP1-204ENST00000545686 CCSER1Q9C0I3 900 aa9.8□□□□□ -0.84
TDP1-204ENST00000545686 KBTBD4Q9NVX7 518 aa9.8□□□□□ -0.84
TDP1-204ENST00000545686 RSPH14Q9UHP6 348 aa9.8□□□□□ -0.84
TDP1-204ENST00000545686 TAF1P21675 1872 aa9.8□□□□□ -0.84
TDP1-204ENST00000545686 NAV1Q8NEY1 1877 aa9.8□□□□□ -0.84
TDP1-204ENST00000545686 ATAD5Q96QE3 1844 aa9.8□□□□□ -0.84
TDP1-204ENST00000545686 COL4A1P02462 1669 aa9.8□□□□□ -0.84
TDP1-204ENST00000545686 TRIM49BA6NDI0 452 aa9.79□□□□□ -0.84
TDP1-204ENST00000545686 KLRC4O43908 158 aa9.79□□□□□ -0.84
TDP1-204ENST00000545686 COBLO75128 1261 aa9.79□□□□□ -0.84
TDP1-204ENST00000545686 EIF5P55010 431 aaKnown RBP9.79□□□□□ -0.84
TDP1-204ENST00000545686 NAALADL2Q58DX5 795 aa9.79□□□□□ -0.84
TDP1-204ENST00000545686 GALNT17Q6IS24 598 aa9.79□□□□□ -0.84
TDP1-204ENST00000545686 CCDC47Q96A33 483 aaKnown RBP9.79□□□□□ -0.84
TDP1-204ENST00000545686 HDAC6Q9UBN7 1215 aa9.79□□□□□ -0.84
TDP1-204ENST00000545686 ABCF2Q9UG63 623 aa9.79□□□□□ -0.84
TDP1-204ENST00000545686 PCDHA4Q9UN74 947 aa9.79□□□□□ -0.84
TDP1-204ENST00000545686 COL5A3P25940 1745 aaPredicted RBP9.79□□□□□ -0.84
TDP1-204ENST00000545686 ENC1O14682 589 aa9.79□□□□□ -0.84
TDP1-204ENST00000545686 PHACTR2O75167 634 aa9.79□□□□□ -0.84
TDP1-204ENST00000545686 PRPHP41219 470 aa9.79□□□□□ -0.84
TDP1-204ENST00000545686 VAV2P52735 878 aa9.79□□□□□ -0.84
TDP1-204ENST00000545686 UBE4AQ14139 1066 aa9.79□□□□□ -0.84
TDP1-204ENST00000545686 COBLL1Q53SF7 1204 aa9.79□□□□□ -0.84
TDP1-204ENST00000545686 CCNI2Q6ZMN8 369 aaPredicted RBP9.79□□□□□ -0.84
TDP1-204ENST00000545686 DTHD1Q6ZMT9 781 aa9.79□□□□□ -0.84
TDP1-204ENST00000545686 AMOTL1Q8IY63 956 aa9.79□□□□□ -0.84
TDP1-204ENST00000545686 MMGT1Q8N4V1 131 aa9.79□□□□□ -0.84
TDP1-204ENST00000545686 DAGLBQ8NCG7 672 aa9.79□□□□□ -0.84
TDP1-204ENST00000545686 CAGE1Q8TC20 777 aa9.79□□□□□ -0.84
TDP1-204ENST00000545686 PPM1EQ8WY54 764 aa9.79□□□□□ -0.84
TDP1-204ENST00000545686 SMARCC1Q92922 1105 aaPredicted RBP9.79□□□□□ -0.84
TDP1-204ENST00000545686 ERGIC2Q96RQ1 377 aa9.79□□□□□ -0.84
TDP1-204ENST00000545686 SELENOOQ9BVL4 669 aa9.79□□□□□ -0.84
TDP1-204ENST00000545686 FAM184BQ9ULE4 1060 aa9.79□□□□□ -0.84
TDP1-204ENST00000545686 PRLRP16471 622 aa9.78□□□□□ -0.84
TDP1-204ENST00000545686 TRIM21P19474 475 aaKnown RBP9.78□□□□□ -0.84
TDP1-204ENST00000545686 ZSCAN29Q8IWY8 852 aaPredicted RBP9.78□□□□□ -0.84
TDP1-204ENST00000545686 TRIM58Q8NG06 486 aa9.78□□□□□ -0.84
TDP1-204ENST00000545686 AENQ8WTP8 325 aaKnown RBP9.78□□□□□ -0.84
TDP1-204ENST00000545686 TUBGCP2Q9BSJ2 902 aa9.78□□□□□ -0.84
TDP1-204ENST00000545686 NHEJ1Q9H9Q4 299 aaPredicted RBP9.78□□□□□ -0.84
TDP1-204ENST00000545686 ARPP21Q9UBL0 812 aaPredicted RBP9.78□□□□□ -0.84
TDP1-204ENST00000545686 MAPK8IP1Q9UQF2 711 aa9.78□□□□□ -0.84
TDP1-204ENST00000545686 KIF13BQ9NQT8 1826 aa9.78□□□□□ -0.84
TDP1-204ENST00000545686 NUTM2BA6NNL0 878 aaPredicted RBP9.78□□□□□ -0.84
TDP1-204ENST00000545686 NUTM2EB1AL46 878 aaPredicted RBP9.78□□□□□ -0.84
TDP1-204ENST00000545686 M0R2N6 131 aa9.78□□□□□ -0.84
TDP1-204ENST00000545686 NTSR2O95665 410 aa9.78□□□□□ -0.84
TDP1-204ENST00000545686 CPP00450 1065 aa9.78□□□□□ -0.84
TDP1-204ENST00000545686 IDEP14735 1019 aa9.78□□□□□ -0.84
TDP1-204ENST00000545686 CCNE1P24864 410 aa9.78□□□□□ -0.84
TDP1-204ENST00000545686 HNRNPH3P31942 346 aaKnown RBP9.78□□□□□ -0.84
TDP1-204ENST00000545686 PMS1P54277 932 aaKnown RBP9.78□□□□□ -0.84
TDP1-204ENST00000545686 KIF5AQ12840 1032 aa9.78□□□□□ -0.84
TDP1-204ENST00000545686 SBK1Q52WX2 424 aa9.78□□□□□ -0.84
TDP1-204ENST00000545686 GBP6Q6ZN66 633 aa9.78□□□□□ -0.84
TDP1-204ENST00000545686 EFCAB13Q8IY85 973 aa9.78□□□□□ -0.84
TDP1-204ENST00000545686 CSGALNACT2Q8N6G5 542 aa9.78□□□□□ -0.84
TDP1-204ENST00000545686 FAM76AQ8TAV0 307 aa9.78□□□□□ -0.84
TDP1-204ENST00000545686 SECISBP2LQ93073 1101 aaKnown RBP9.78□□□□□ -0.84
TDP1-204ENST00000545686 AK8Q96MA6 479 aa9.78□□□□□ -0.84
TDP1-204ENST00000545686 ATP8A2Q9NTI2 1148 aa9.78□□□□□ -0.84
TDP1-204ENST00000545686 JRKLQ9Y4A0 524 aa9.78□□□□□ -0.84
TDP1-204ENST00000545686 MYH7BA7E2Y1 1941 aa9.78□□□□□ -0.84
TDP1-204ENST00000545686 CDK5RAP2Q96SN8 1893 aa9.77□□□□□ -0.84
TDP1-204ENST00000545686 CYP2D7A0A087X1C5 515 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms