RNA–Protein interactions for RNA: ENST00000545115.5

DDX11-228, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-228ENST00000545115 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.76■□□□□ 0.27
DDX11-228ENST00000545115 KIAA0355O15063 1070 aa16.75■□□□□ 0.27
DDX11-228ENST00000545115 FOXP2O15409 715 aa16.75■□□□□ 0.27
DDX11-228ENST00000545115 RAG1P15918 1043 aa16.75■□□□□ 0.27
DDX11-228ENST00000545115 ITGB8P26012 769 aa16.75■□□□□ 0.27
DDX11-228ENST00000545115 CST5P28325 142 aaPredicted RBP16.75■□□□□ 0.27
DDX11-228ENST00000545115 RRP1P56182 461 aaKnown RBP16.75■□□□□ 0.27
DDX11-228ENST00000545115 CCSAPQ6IQ19 270 aaPredicted RBP16.75■□□□□ 0.27
DDX11-228ENST00000545115 CCDC129Q6ZRS4 1044 aa16.75■□□□□ 0.27
DDX11-228ENST00000545115 ANKRD33Q7Z3H0 272 aa16.75■□□□□ 0.27
DDX11-228ENST00000545115 STAG1Q8WVM7 1258 aa16.75■□□□□ 0.27
DDX11-228ENST00000545115 TOX2Q96NM4 488 aa16.75■□□□□ 0.27
DDX11-228ENST00000545115 GUCD1Q96NT3 240 aa16.75■□□□□ 0.27
DDX11-228ENST00000545115 STX8Q9UNK0 236 aa16.75■□□□□ 0.27
DDX11-228ENST00000545115 MYADML2A6NDP7 307 aa16.74■□□□□ 0.27
DDX11-228ENST00000545115 DCDC2CA8MYV0 355 aa16.74■□□□□ 0.27
DDX11-228ENST00000545115 C6orf222P0C671 652 aaPredicted RBP16.74■□□□□ 0.27
DDX11-228ENST00000545115 MCCP23508 829 aa16.74■□□□□ 0.27
DDX11-228ENST00000545115 CTDSPL2Q05D32 466 aa16.74■□□□□ 0.27
DDX11-228ENST00000545115 KCNA10Q16322 511 aa16.74■□□□□ 0.27
DDX11-228ENST00000545115 CCDC144BQ3MJ40 725 aa16.74■□□□□ 0.27
DDX11-228ENST00000545115 PCSK9Q8NBP7 692 aaKnown RBP16.74■□□□□ 0.27
DDX11-228ENST00000545115 EVI5LQ96CN4 794 aa16.74■□□□□ 0.27
DDX11-228ENST00000545115 FAM161BQ96MY7 647 aa16.74■□□□□ 0.27
DDX11-228ENST00000545115 SPC25Q9HBM1 224 aa16.74■□□□□ 0.27
DDX11-228ENST00000545115 TMEM39AQ9NV64 488 aa16.74■□□□□ 0.27
DDX11-228ENST00000545115 ZNF536O15090 1300 aa16.73■□□□□ 0.27
DDX11-228ENST00000545115 ADCY6O43306 1168 aa16.73■□□□□ 0.27
DDX11-228ENST00000545115 PLA2G6O60733 806 aa16.73■□□□□ 0.27
DDX11-228ENST00000545115 SMAD3P84022 425 aaKnown RBP16.73■□□□□ 0.27
DDX11-228ENST00000545115 FAAP100Q0VG06 881 aa16.73■□□□□ 0.27
DDX11-228ENST00000545115 TKFCQ3LXA3 575 aa16.73■□□□□ 0.27
DDX11-228ENST00000545115 ANKRD45Q5TZF3 282 aa16.73■□□□□ 0.27
DDX11-228ENST00000545115 CCDC144CPQ8IYA2 1237 aa16.73■□□□□ 0.27
DDX11-228ENST00000545115 FAM133AQ8N9E0 248 aa16.73■□□□□ 0.27
DDX11-228ENST00000545115 AGBL1Q96MI9 1066 aa16.73■□□□□ 0.27
DDX11-228ENST00000545115 GLT1D1Q96MS3 346 aa16.73■□□□□ 0.27
DDX11-228ENST00000545115 UPF3AQ9H1J1 476 aaKnown RBP16.73■□□□□ 0.27
DDX11-228ENST00000545115 A1CFQ9NQ94 594 aaKnown RBP16.73■□□□□ 0.27
DDX11-228ENST00000545115 IL17RBQ9NRM6 502 aa16.73■□□□□ 0.27
DDX11-228ENST00000545115 RNF146Q9NTX7 359 aa16.73■□□□□ 0.27
DDX11-228ENST00000545115 ANAPC4Q9UJX5 808 aa16.73■□□□□ 0.27
DDX11-228ENST00000545115 ELP1O95163 1332 aa16.72■□□□□ 0.27
DDX11-228ENST00000545115 MROH7Q68CQ1 1323 aa16.72■□□□□ 0.27
DDX11-228ENST00000545115 NMT2O60551 498 aa16.72■□□□□ 0.27
DDX11-228ENST00000545115 GJA9P57773 515 aa16.72■□□□□ 0.27
DDX11-228ENST00000545115 CNTN2Q02246 1040 aa16.72■□□□□ 0.27
DDX11-228ENST00000545115 FPGSQ05932 587 aa16.72■□□□□ 0.27
DDX11-228ENST00000545115 RCSD1Q6JBY9 416 aa16.72■□□□□ 0.27
DDX11-228ENST00000545115 KCTD1Q719H9 257 aa16.72■□□□□ 0.27
DDX11-228ENST00000545115 RNPC3Q96LT9 517 aaKnown RBP16.72■□□□□ 0.27
DDX11-228ENST00000545115 TRERF1Q96PN7 1200 aa16.72■□□□□ 0.27
DDX11-228ENST00000545115 KATNBL1Q9H079 304 aa16.72■□□□□ 0.27
DDX11-228ENST00000545115 HELLSQ9NRZ9 838 aa16.72■□□□□ 0.27
DDX11-228ENST00000545115 RANBP6O60518 1105 aaKnown RBP16.71■□□□□ 0.27
DDX11-228ENST00000545115 ASGR1P07306 291 aa16.71■□□□□ 0.27
DDX11-228ENST00000545115 ALAS1P13196 640 aa16.71■□□□□ 0.27
DDX11-228ENST00000545115 PDE1AP54750 535 aa16.71■□□□□ 0.27
DDX11-228ENST00000545115 IRX5P78411 483 aaPredicted RBP16.71■□□□□ 0.27
DDX11-228ENST00000545115 VPS53Q5VIR6 699 aa16.71■□□□□ 0.27
DDX11-228ENST00000545115 CHMP4CQ96CF2 233 aa16.71■□□□□ 0.27
DDX11-228ENST00000545115 INCENPQ9NQS7 918 aa16.71■□□□□ 0.27
DDX11-228ENST00000545115 MCM3APO60318 1980 aa16.71■□□□□ 0.27
DDX11-228ENST00000545115 A0A0U1RQG5 324 aaPredicted RBP16.7■□□□□ 0.26
DDX11-228ENST00000545115 ASB14A6NK59 587 aa16.7■□□□□ 0.26
DDX11-228ENST00000545115 ORC4O43929 436 aa16.7■□□□□ 0.26
DDX11-228ENST00000545115 EPHB4P54760 987 aa16.7■□□□□ 0.26
DDX11-228ENST00000545115 HDAC1Q13547 482 aaPredicted RBP16.7■□□□□ 0.26
DDX11-228ENST00000545115 ALX1Q15699 326 aa16.7■□□□□ 0.26
DDX11-228ENST00000545115 GNASQ5JWF2 1037 aa16.7■□□□□ 0.26
DDX11-228ENST00000545115 CCDC174Q6PII3 467 aa16.7■□□□□ 0.26
DDX11-228ENST00000545115 VTI1AQ96AJ9 217 aa16.7■□□□□ 0.26
DDX11-228ENST00000545115 CRBNQ96SW2 442 aa16.7■□□□□ 0.26
DDX11-228ENST00000545115 TBX21Q9UL17 535 aa16.7■□□□□ 0.26
DDX11-228ENST00000545115 PRR12Q9ULL5 1215 aa16.7■□□□□ 0.26
DDX11-228ENST00000545115 SOWAHBA6NEL2 793 aa16.69■□□□□ 0.26
DDX11-228ENST00000545115 TIMP1P01033 207 aa16.69■□□□□ 0.26
DDX11-228ENST00000545115 FGRP09769 529 aa16.69■□□□□ 0.26
DDX11-228ENST00000545115 NOVP48745 357 aa16.69■□□□□ 0.26
DDX11-228ENST00000545115 CDK7P50613 346 aa16.69■□□□□ 0.26
DDX11-228ENST00000545115 NKX3-2P78367 333 aa16.69■□□□□ 0.26
DDX11-228ENST00000545115 TNFAIP2Q03169 654 aa16.69■□□□□ 0.26
DDX11-228ENST00000545115 CCDC96Q2M329 555 aa16.69■□□□□ 0.26
DDX11-228ENST00000545115 RASGRP2Q7LDG7 609 aa16.69■□□□□ 0.26
DDX11-228ENST00000545115 TICAM2Q86XR7 235 aa16.69■□□□□ 0.26
DDX11-228ENST00000545115 DCAF4Q8WV16 495 aa16.69■□□□□ 0.26
DDX11-228ENST00000545115 CDX2Q99626 313 aaPredicted RBP16.69■□□□□ 0.26
DDX11-228ENST00000545115 SEMA6BQ9H3T3 888 aa16.69■□□□□ 0.26
DDX11-228ENST00000545115 TOMM22Q9NS69 142 aa16.69■□□□□ 0.26
DDX11-228ENST00000545115 MTMR7Q9Y216 660 aa16.69■□□□□ 0.26
DDX11-228ENST00000545115 LAMA2P24043 3122 aaKnown RBP16.68■□□□□ 0.26
DDX11-228ENST00000545115 TMEM265A0A087WTH1 108 aa16.68■□□□□ 0.26
DDX11-228ENST00000545115 A0A0D9SFI3 127 aa16.68■□□□□ 0.26
DDX11-228ENST00000545115 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.68■□□□□ 0.26
DDX11-228ENST00000545115 ARVCFO00192 962 aa16.68■□□□□ 0.26
DDX11-228ENST00000545115 CTAGE5O15320 804 aa16.68■□□□□ 0.26
DDX11-228ENST00000545115 ICAM1P05362 532 aa16.68■□□□□ 0.26
DDX11-228ENST00000545115 SNAP25P60880 206 aa16.68■□□□□ 0.26
DDX11-228ENST00000545115 MCMDC2Q4G0Z9 681 aa16.68■□□□□ 0.26
DDX11-228ENST00000545115 MUM1L1Q5H9M0 696 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms