RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 ATP2B2Q01814 1243 aa8.75□□□□□ -1.01
CPSF7-224ENST00000544990 NR6A1Q15406 480 aa8.75□□□□□ -1.01
CPSF7-224ENST00000544990 ALX1Q15699 326 aa8.75□□□□□ -1.01
CPSF7-224ENST00000544990 SLC9C1Q4G0N8 1177 aa8.75□□□□□ -1.01
CPSF7-224ENST00000544990 CATSPERGQ6ZRH7 1159 aa8.75□□□□□ -1.01
CPSF7-224ENST00000544990 CCAR1Q8IX12 1150 aaKnown RBP8.75□□□□□ -1.01
CPSF7-224ENST00000544990 GPRC5AQ8NFJ5 357 aa8.75□□□□□ -1.01
CPSF7-224ENST00000544990 RAET1EQ8TD07 263 aa8.75□□□□□ -1.01
CPSF7-224ENST00000544990 LPAR1Q92633 364 aa8.75□□□□□ -1.01
CPSF7-224ENST00000544990 FAM227BQ96M60 508 aa8.75□□□□□ -1.01
CPSF7-224ENST00000544990 RPAP3Q9H6T3 665 aaPredicted RBP8.75□□□□□ -1.01
CPSF7-224ENST00000544990 HOXC10Q9NYD6 342 aa8.75□□□□□ -1.01
CPSF7-224ENST00000544990 PCDH10Q9P2E7 1040 aa8.75□□□□□ -1.01
CPSF7-224ENST00000544990 MORF4L1Q9UBU8 362 aa8.75□□□□□ -1.01
CPSF7-224ENST00000544990 PTCH2Q9Y6C5 1203 aa8.75□□□□□ -1.01
CPSF7-224ENST00000544990 CCDC171Q6TFL3 1326 aa8.75□□□□□ -1.01
CPSF7-224ENST00000544990 MYPNQ86TC9 1320 aa8.75□□□□□ -1.01
CPSF7-224ENST00000544990 ZSWIM8A7E2V4 1837 aa8.75□□□□□ -1.01
CPSF7-224ENST00000544990 PRDM1O75626 825 aa8.74□□□□□ -1.01
CPSF7-224ENST00000544990 TSPY3P0CV98 308 aa8.74□□□□□ -1.01
CPSF7-224ENST00000544990 TSPY8P0CW00 308 aa8.74□□□□□ -1.01
CPSF7-224ENST00000544990 HSPD1P10809 573 aaKnown RBP8.74□□□□□ -1.01
CPSF7-224ENST00000544990 EEF2P13639 858 aaKnown RBP8.74□□□□□ -1.01
CPSF7-224ENST00000544990 CTGFP29279 349 aa8.74□□□□□ -1.01
CPSF7-224ENST00000544990 CCNA1P78396 465 aa8.74□□□□□ -1.01
CPSF7-224ENST00000544990 COG2Q14746 738 aa8.74□□□□□ -1.01
CPSF7-224ENST00000544990 TTC22Q5TAA0 569 aa8.74□□□□□ -1.01
CPSF7-224ENST00000544990 VPS53Q5VIR6 699 aa8.74□□□□□ -1.01
CPSF7-224ENST00000544990 CWC27Q6UX04 472 aaKnown RBP8.74□□□□□ -1.01
CPSF7-224ENST00000544990 THAP11Q96EK4 314 aa8.74□□□□□ -1.01
CPSF7-224ENST00000544990 TANGO6Q9C0B7 1094 aa8.74□□□□□ -1.01
CPSF7-224ENST00000544990 VCPKMTQ9H867 229 aa8.74□□□□□ -1.01
CPSF7-224ENST00000544990 PLSCR2Q9NRY7 297 aa8.74□□□□□ -1.01
CPSF7-224ENST00000544990 NYAP2Q9P242 653 aa8.74□□□□□ -1.01
CPSF7-224ENST00000544990 RABGAP1Q9Y3P9 1069 aa8.74□□□□□ -1.01
CPSF7-224ENST00000544990 DOCK3Q8IZD9 2030 aa8.74□□□□□ -1.01
CPSF7-224ENST00000544990 MYH4Q9Y623 1939 aa8.74□□□□□ -1.01
CPSF7-224ENST00000544990 WDR46O15213 610 aaKnown RBP8.73□□□□□ -1.01
CPSF7-224ENST00000544990 FGAP02671 866 aa8.73□□□□□ -1.01
CPSF7-224ENST00000544990 NEFLP07196 543 aa8.73□□□□□ -1.01
CPSF7-224ENST00000544990 MAPK4P31152 587 aa8.73□□□□□ -1.01
CPSF7-224ENST00000544990 GRK4P32298 578 aa8.73□□□□□ -1.01
CPSF7-224ENST00000544990 CTHP32929 405 aa8.73□□□□□ -1.01
CPSF7-224ENST00000544990 ERVK-9P63128 1117 aa8.73□□□□□ -1.01
CPSF7-224ENST00000544990 ERVK-24P63145 666 aa8.73□□□□□ -1.01
CPSF7-224ENST00000544990 TFAP4Q01664 338 aa8.73□□□□□ -1.01
CPSF7-224ENST00000544990 PRKCZQ05513 592 aa8.73□□□□□ -1.01
CPSF7-224ENST00000544990 PTPRNQ16849 979 aa8.73□□□□□ -1.01
CPSF7-224ENST00000544990 MSS51Q4VC12 460 aa8.73□□□□□ -1.01
CPSF7-224ENST00000544990 POTEGQ6S5H5 508 aa8.73□□□□□ -1.01
CPSF7-224ENST00000544990 LBX2Q6XYB7 198 aa8.73□□□□□ -1.01
CPSF7-224ENST00000544990 CENPQQ7L2Z9 268 aaPredicted RBP8.73□□□□□ -1.01
CPSF7-224ENST00000544990 CLEC10AQ8IUN9 316 aa8.73□□□□□ -1.01
CPSF7-224ENST00000544990 SIAH1Q8IUQ4 282 aa8.73□□□□□ -1.01
CPSF7-224ENST00000544990 NEDD1Q8NHV4 660 aa8.73□□□□□ -1.01
CPSF7-224ENST00000544990 RUFY2Q8WXA3 655 aa8.73□□□□□ -1.01
CPSF7-224ENST00000544990 ARMC5Q96C12 935 aa8.73□□□□□ -1.01
CPSF7-224ENST00000544990 PAGR1Q9BTK6 254 aa8.73□□□□□ -1.01
CPSF7-224ENST00000544990 CWC22Q9HCG8 908 aaKnown RBP8.73□□□□□ -1.01
CPSF7-224ENST00000544990 RBPJLQ9UBG7 517 aa8.73□□□□□ -1.01
CPSF7-224ENST00000544990 ANAPC4Q9UJX5 808 aa8.73□□□□□ -1.01
CPSF7-224ENST00000544990 GREB1LQ9C091 1923 aaPredicted RBP8.73□□□□□ -1.01
CPSF7-224ENST00000544990 ZMYM6O95789 1325 aa8.73□□□□□ -1.01
CPSF7-224ENST00000544990 TSPY2A6NKD2 308 aa8.72□□□□□ -1.01
CPSF7-224ENST00000544990 FOXP2O15409 715 aa8.72□□□□□ -1.01
CPSF7-224ENST00000544990 FLOT1O75955 427 aa8.72□□□□□ -1.01
CPSF7-224ENST00000544990 TTLL1O95922 423 aa8.72□□□□□ -1.01
CPSF7-224ENST00000544990 FLT3LGP49771 235 aa8.72□□□□□ -1.01
CPSF7-224ENST00000544990 SOX10P56693 466 aa8.72□□□□□ -1.01
CPSF7-224ENST00000544990 UBXN2AP68543 259 aa8.72□□□□□ -1.01
CPSF7-224ENST00000544990 IRF5Q13568 498 aa8.72□□□□□ -1.01
CPSF7-224ENST00000544990 ZNF589Q86UQ0 364 aaPredicted RBP8.72□□□□□ -1.01
CPSF7-224ENST00000544990 SPICE1Q8N0Z3 855 aa8.72□□□□□ -1.01
CPSF7-224ENST00000544990 MB21D1Q8N884 522 aa8.72□□□□□ -1.01
CPSF7-224ENST00000544990 TXNRD2Q9NNW7 524 aa8.72□□□□□ -1.01
CPSF7-224ENST00000544990 TOMM22Q9NS69 142 aa8.72□□□□□ -1.01
CPSF7-224ENST00000544990 MTMR4Q9NYA4 1195 aa8.72□□□□□ -1.01
CPSF7-224ENST00000544990 BIN2Q9UBW5 565 aaPredicted RBP8.72□□□□□ -1.01
CPSF7-224ENST00000544990 CLIP2Q9UDT6 1046 aa8.72□□□□□ -1.01
CPSF7-224ENST00000544990 SYNPO2Q9UMS6 1093 aa8.72□□□□□ -1.01
CPSF7-224ENST00000544990 GABRQQ9UN88 632 aa8.72□□□□□ -1.01
CPSF7-224ENST00000544990 IGKV6D-41A0A0C4DH26 115 aa8.71□□□□□ -1.02
CPSF7-224ENST00000544990 POTEMA6NI47 508 aa8.71□□□□□ -1.02
CPSF7-224ENST00000544990 F5H6K3 240 aa8.71□□□□□ -1.02
CPSF7-224ENST00000544990 ZNF213O14771 459 aa8.71□□□□□ -1.02
CPSF7-224ENST00000544990 ORC4O43929 436 aa8.71□□□□□ -1.02
CPSF7-224ENST00000544990 ADCY3O60266 1144 aa8.71□□□□□ -1.02
CPSF7-224ENST00000544990 RANBP6O60518 1105 aaKnown RBP8.71□□□□□ -1.02
CPSF7-224ENST00000544990 PCP11498 1178 aaKnown RBP8.71□□□□□ -1.02
CPSF7-224ENST00000544990 GSPT1P15170 499 aaKnown RBP8.71□□□□□ -1.02
CPSF7-224ENST00000544990 MLLT1Q03111 559 aaPredicted RBP8.71□□□□□ -1.02
CPSF7-224ENST00000544990 KLRC3Q07444 240 aa8.71□□□□□ -1.02
CPSF7-224ENST00000544990 FAM47AQ5JRC9 791 aa8.71□□□□□ -1.02
CPSF7-224ENST00000544990 MFSD6Q6ZSS7 791 aa8.71□□□□□ -1.02
CPSF7-224ENST00000544990 ARMC2Q8NEN0 867 aa8.71□□□□□ -1.02
CPSF7-224ENST00000544990 EPS8L1Q8TE68 723 aa8.71□□□□□ -1.02
CPSF7-224ENST00000544990 SH3TC2Q8TF17 1288 aa8.71□□□□□ -1.02
CPSF7-224ENST00000544990 GLMNQ92990 594 aa8.71□□□□□ -1.02
CPSF7-224ENST00000544990 MKL1Q969V6 931 aa8.71□□□□□ -1.02
CPSF7-224ENST00000544990 CEP95Q96GE4 821 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 2201.5 ms