RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 CNNM4Q6P4Q7 775 aa5.22□□□□□ -1.57
SCFD1-207ENST00000544052 CRACR2BQ8N4Y2 399 aaPredicted RBP5.22□□□□□ -1.57
SCFD1-207ENST00000544052 NKX2-4Q9H2Z4 354 aa5.22□□□□□ -1.57
SCFD1-207ENST00000544052 CHST7Q9NS84 486 aa5.22□□□□□ -1.57
SCFD1-207ENST00000544052 NDOR1Q9UHB4 597 aa5.22□□□□□ -1.57
SCFD1-207ENST00000544052 SFMBT1Q9UHJ3 866 aa5.22□□□□□ -1.57
SCFD1-207ENST00000544052 DCAF1Q9Y4B6 1507 aa5.21□□□□□ -1.57
SCFD1-207ENST00000544052 FAM83GA6ND36 823 aa5.21□□□□□ -1.58
SCFD1-207ENST00000544052 SNRPB2P08579 225 aaKnown RBP5.21□□□□□ -1.58
SCFD1-207ENST00000544052 DENND5AQ6IQ26 1287 aa5.21□□□□□ -1.58
SCFD1-207ENST00000544052 CRTC3Q6UUV7 619 aa5.21□□□□□ -1.58
SCFD1-207ENST00000544052 ZNF765Q7L2R6 523 aa5.21□□□□□ -1.58
SCFD1-207ENST00000544052 KRT26Q7Z3Y9 468 aa5.21□□□□□ -1.58
SCFD1-207ENST00000544052 FGD2Q7Z6J4 655 aa5.21□□□□□ -1.58
SCFD1-207ENST00000544052 LRRTM3Q86VH5 581 aa5.21□□□□□ -1.58
SCFD1-207ENST00000544052 CLEC10AQ8IUN9 316 aa5.21□□□□□ -1.58
SCFD1-207ENST00000544052 FBXL6Q8N531 539 aa5.21□□□□□ -1.58
SCFD1-207ENST00000544052 FAM83CQ9BQN1 747 aa5.21□□□□□ -1.58
SCFD1-207ENST00000544052 SSBP4Q9BWG4 385 aaPredicted RBP5.21□□□□□ -1.58
SCFD1-207ENST00000544052 MRPL4Q9BYD3 311 aaKnown RBP5.21□□□□□ -1.58
SCFD1-207ENST00000544052 TRIM39Q9HCM9 518 aa5.21□□□□□ -1.58
SCFD1-207ENST00000544052 TRAF6Q9Y4K3 522 aa5.21□□□□□ -1.58
SCFD1-207ENST00000544052 U3KQE9 123 aa5.21□□□□□ -1.58
SCFD1-207ENST00000544052 FAM170BA6NMN3 283 aa5.2□□□□□ -1.58
SCFD1-207ENST00000544052 AMPD2Q01433 879 aa5.2□□□□□ -1.58
SCFD1-207ENST00000544052 OGFOD3Q6PK18 319 aa5.2□□□□□ -1.58
SCFD1-207ENST00000544052 BRAPQ7Z569 592 aa5.2□□□□□ -1.58
SCFD1-207ENST00000544052 ZAR1Q86SH2 424 aa5.2□□□□□ -1.58
SCFD1-207ENST00000544052 RNF180Q86T96 592 aa5.2□□□□□ -1.58
SCFD1-207ENST00000544052 KCTD13Q8WZ19 329 aa5.2□□□□□ -1.58
SCFD1-207ENST00000544052 C1orf159Q96HA4 380 aa5.2□□□□□ -1.58
SCFD1-207ENST00000544052 MFSD14AQ96MC6 490 aa5.2□□□□□ -1.58
SCFD1-207ENST00000544052 TMX1Q9H3N1 280 aa5.2□□□□□ -1.58
SCFD1-207ENST00000544052 GPRC5CQ9NQ84 441 aa5.2□□□□□ -1.58
SCFD1-207ENST00000544052 KLHL42Q9P2K6 505 aa5.2□□□□□ -1.58
SCFD1-207ENST00000544052 ASXL2Q76L83 1435 aa5.2□□□□□ -1.58
SCFD1-207ENST00000544052 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.2□□□□□ -1.58
SCFD1-207ENST00000544052 GSG1L2A8MUP6 293 aa5.2□□□□□ -1.58
SCFD1-207ENST00000544052 WASH4PA8MWX3 477 aa5.2□□□□□ -1.58
SCFD1-207ENST00000544052 STXBP3O00186 592 aa5.2□□□□□ -1.58
SCFD1-207ENST00000544052 DNAJC8O75937 253 aaPredicted RBP5.2□□□□□ -1.58
SCFD1-207ENST00000544052 HOXC12P31275 282 aa5.2□□□□□ -1.58
SCFD1-207ENST00000544052 CDKN1CP49918 316 aaPredicted RBP5.2□□□□□ -1.58
SCFD1-207ENST00000544052 SCRN1Q12765 414 aa5.2□□□□□ -1.58
SCFD1-207ENST00000544052 ZNF460Q14592 562 aa5.2□□□□□ -1.58
SCFD1-207ENST00000544052 GIMAP7Q8NHV1 300 aa5.2□□□□□ -1.58
SCFD1-207ENST00000544052 CHAC2Q8WUX2 184 aa5.2□□□□□ -1.58
SCFD1-207ENST00000544052 SCLYQ96I15 445 aa5.2□□□□□ -1.58
SCFD1-207ENST00000544052 KRTAP9-2Q9BYQ4 174 aa5.2□□□□□ -1.58
SCFD1-207ENST00000544052 C7orf69Q9H7B7 122 aa5.2□□□□□ -1.58
SCFD1-207ENST00000544052 CYP26B1Q9NR63 512 aa5.2□□□□□ -1.58
SCFD1-207ENST00000544052 DDX56Q9NY93 547 aaKnown RBP5.2□□□□□ -1.58
SCFD1-207ENST00000544052 KCNH3Q9ULD8 1083 aa5.2□□□□□ -1.58
SCFD1-207ENST00000544052 SCRIBQ14160 1630 aa5.2□□□□□ -1.58
SCFD1-207ENST00000544052 DNAJC25-GNG10A0A024R161 153 aa5.19□□□□□ -1.58
SCFD1-207ENST00000544052 GRB10Q13322 594 aa5.19□□□□□ -1.58
SCFD1-207ENST00000544052 TRIM61Q5EBN2 209 aa5.19□□□□□ -1.58
SCFD1-207ENST00000544052 SLC35F1Q5T1Q4 408 aa5.19□□□□□ -1.58
SCFD1-207ENST00000544052 NBPF11Q86T75 865 aa5.19□□□□□ -1.58
SCFD1-207ENST00000544052 PRPF38AQ8NAV1 312 aaKnown RBP5.19□□□□□ -1.58
SCFD1-207ENST00000544052 HDAC8Q9BY41 377 aa5.19□□□□□ -1.58
SCFD1-207ENST00000544052 CAAP1Q9H8G2 361 aa5.19□□□□□ -1.58
SCFD1-207ENST00000544052 STOML1Q9UBI4 398 aa5.19□□□□□ -1.58
SCFD1-207ENST00000544052 ATP8A1Q9Y2Q0 1164 aa5.19□□□□□ -1.58
SCFD1-207ENST00000544052 SF3B6Q9Y3B4 125 aaKnown RBP5.19□□□□□ -1.58
SCFD1-207ENST00000544052 CAPN6Q9Y6Q1 641 aa5.19□□□□□ -1.58
SCFD1-207ENST00000544052 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.19□□□□□ -1.58
SCFD1-207ENST00000544052 KCNQ2O43526 872 aa5.19□□□□□ -1.58
SCFD1-207ENST00000544052 CD3EP07766 207 aa5.19□□□□□ -1.58
SCFD1-207ENST00000544052 ZNF865P0CJ78 1059 aaPredicted RBP5.19□□□□□ -1.58
SCFD1-207ENST00000544052 IFNGR1P15260 489 aa5.19□□□□□ -1.58
SCFD1-207ENST00000544052 KIR3DL1P43629 444 aa5.19□□□□□ -1.58
SCFD1-207ENST00000544052 GABREP78334 506 aa5.19□□□□□ -1.58
SCFD1-207ENST00000544052 MAP4K2Q12851 820 aa5.19□□□□□ -1.58
SCFD1-207ENST00000544052 CT47A1Q5JQC4 288 aaPredicted RBP5.19□□□□□ -1.58
SCFD1-207ENST00000544052 KCNT2Q6UVM3 1135 aa5.19□□□□□ -1.58
SCFD1-207ENST00000544052 USP53Q70EK8 1073 aa5.19□□□□□ -1.58
SCFD1-207ENST00000544052 STRA8Q7Z7C7 330 aa5.19□□□□□ -1.58
SCFD1-207ENST00000544052 MFSD4AQ8N468 514 aa5.19□□□□□ -1.58
SCFD1-207ENST00000544052 KREMEN2Q8NCW0 462 aa5.19□□□□□ -1.58
SCFD1-207ENST00000544052 GSTCDQ8NEC7 633 aa5.19□□□□□ -1.58
SCFD1-207ENST00000544052 PTPRN2Q92932 1015 aa5.19□□□□□ -1.58
SCFD1-207ENST00000544052 TP53INP1Q96A56 240 aa5.19□□□□□ -1.58
SCFD1-207ENST00000544052 COX4I2Q96KJ9 171 aa5.19□□□□□ -1.58
SCFD1-207ENST00000544052 FCRL3Q96P31 734 aaPredicted RBP5.19□□□□□ -1.58
SCFD1-207ENST00000544052 ASCC2Q9H1I8 757 aaPredicted RBP5.19□□□□□ -1.58
SCFD1-207ENST00000544052 PRR13Q9NZ81 148 aa5.19□□□□□ -1.58
SCFD1-207ENST00000544052 TNPO3Q9Y5L0 923 aaKnown RBP5.19□□□□□ -1.58
SCFD1-207ENST00000544052 ARNTLO00327 626 aa5.18□□□□□ -1.58
SCFD1-207ENST00000544052 RASGRP1O95267 797 aa5.18□□□□□ -1.58
SCFD1-207ENST00000544052 SCG5P05408 212 aa5.18□□□□□ -1.58
SCFD1-207ENST00000544052 THBDP07204 575 aa5.18□□□□□ -1.58
SCFD1-207ENST00000544052 ITIH2P19823 946 aa5.18□□□□□ -1.58
SCFD1-207ENST00000544052 NFKB2Q00653 900 aa5.18□□□□□ -1.58
SCFD1-207ENST00000544052 POU4F1Q01851 419 aa5.18□□□□□ -1.58
SCFD1-207ENST00000544052 LRP8Q14114 963 aa5.18□□□□□ -1.58
SCFD1-207ENST00000544052 CLEC16AQ2KHT3 1053 aa5.18□□□□□ -1.58
SCFD1-207ENST00000544052 CDKAL1Q5VV42 579 aa5.18□□□□□ -1.58
SCFD1-207ENST00000544052 FAM181AQ8N9Y4 354 aa5.18□□□□□ -1.58
SCFD1-207ENST00000544052 COPS5Q92905 334 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms