RNA–Protein interactions for RNA: ENST00000543854.5

SPPL3-208, Transcript of signal peptide peptidase like 3, humanhuman

TSL 5

Gene SPPL3, Length 508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-208ENST00000543854 SLC16A2P36021 539 aa22.42■■□□□ 1.18
SPPL3-208ENST00000543854 ZNF543Q08ER8 600 aa22.42■■□□□ 1.18
SPPL3-208ENST00000543854 TKFCQ3LXA3 575 aa22.42■■□□□ 1.18
SPPL3-208ENST00000543854 LHX8Q68G74 356 aa22.42■■□□□ 1.18
SPPL3-208ENST00000543854 TTBK2Q6IQ55 1244 aa22.42■■□□□ 1.18
SPPL3-208ENST00000543854 BTNL9Q6UXG8 535 aa22.42■■□□□ 1.18
SPPL3-208ENST00000543854 KIAA1211Q6ZU35 1233 aa22.42■■□□□ 1.18
SPPL3-208ENST00000543854 SKAP1Q86WV1 359 aa22.42■■□□□ 1.18
SPPL3-208ENST00000543854 ENAHQ8N8S7 591 aaPredicted RBP22.42■■□□□ 1.18
SPPL3-208ENST00000543854 PNMA1Q8ND90 353 aa22.42■■□□□ 1.18
SPPL3-208ENST00000543854 DPF3Q92784 378 aa22.42■■□□□ 1.18
SPPL3-208ENST00000543854 AGBL1Q96MI9 1066 aa22.42■■□□□ 1.18
SPPL3-208ENST00000543854 RNF146Q9NTX7 359 aa22.42■■□□□ 1.18
SPPL3-208ENST00000543854 DNAJC25-GNG10A0A024R161 153 aa22.41■■□□□ 1.18
SPPL3-208ENST00000543854 CYP21A2P08686 494 aa22.41■■□□□ 1.18
SPPL3-208ENST00000543854 SNAP25P60880 206 aa22.41■■□□□ 1.18
SPPL3-208ENST00000543854 GPATCH4Q5T3I0 446 aaKnown RBP22.41■■□□□ 1.18
SPPL3-208ENST00000543854 TINF2Q9BSI4 451 aa22.41■■□□□ 1.18
SPPL3-208ENST00000543854 RANBP17Q9H2T7 1088 aaKnown RBP22.41■■□□□ 1.18
SPPL3-208ENST00000543854 NRBP1Q9UHY1 535 aa22.41■■□□□ 1.18
SPPL3-208ENST00000543854 CCPG1Q9ULG6 757 aa22.41■■□□□ 1.18
SPPL3-208ENST00000543854 SEPT4O43236 478 aa22.4■■□□□ 1.18
SPPL3-208ENST00000543854 ALAS1P13196 640 aa22.4■■□□□ 1.18
SPPL3-208ENST00000543854 RALYLQ86SE5 291 aaKnown RBP22.4■■□□□ 1.18
SPPL3-208ENST00000543854 MSL3Q8N5Y2 521 aaKnown RBP22.4■■□□□ 1.18
SPPL3-208ENST00000543854 ANKS1AQ92625 1134 aa22.4■■□□□ 1.18
SPPL3-208ENST00000543854 C11orf49Q9H6J7 331 aa22.4■■□□□ 1.18
SPPL3-208ENST00000543854 ICAM1P05362 532 aa22.39■■□□□ 1.17
SPPL3-208ENST00000543854 MNX1P50219 401 aaPredicted RBP22.39■■□□□ 1.17
SPPL3-208ENST00000543854 IFIT1BQ5T764 474 aaKnown RBP22.39■■□□□ 1.17
SPPL3-208ENST00000543854 ZNF467Q7Z7K2 595 aaPredicted RBP22.39■■□□□ 1.17
SPPL3-208ENST00000543854 MAP4K1Q92918 833 aa22.39■■□□□ 1.17
SPPL3-208ENST00000543854 TRERF1Q96PN7 1200 aa22.39■■□□□ 1.17
SPPL3-208ENST00000543854 ESYT1Q9BSJ8 1104 aa22.39■■□□□ 1.17
SPPL3-208ENST00000543854 CNPY2Q9Y2B0 182 aa22.39■■□□□ 1.17
SPPL3-208ENST00000543854 RBM8AQ9Y5S9 174 aaKnown RBP22.39■■□□□ 1.17
SPPL3-208ENST00000543854 PFASO15067 1338 aa22.38■■□□□ 1.17
SPPL3-208ENST00000543854 SYNGAP1Q96PV0 1343 aa22.38■■□□□ 1.17
SPPL3-208ENST00000543854 PRAMEF19Q5SWL8 479 aa22.38■■□□□ 1.17
SPPL3-208ENST00000543854 A1CFQ9NQ94 594 aaKnown RBP22.38■■□□□ 1.17
SPPL3-208ENST00000543854 ASPRV1Q53RT3 343 aa22.37■■□□□ 1.17
SPPL3-208ENST00000543854 CYB5R4Q7L1T6 521 aa22.37■■□□□ 1.17
SPPL3-208ENST00000543854 NCOA7Q8NI08 942 aa22.37■■□□□ 1.17
SPPL3-208ENST00000543854 PNMA2Q9UL42 364 aa22.37■■□□□ 1.17
SPPL3-208ENST00000543854 CEP290O15078 2479 aa22.37■■□□□ 1.17
SPPL3-208ENST00000543854 ALPK3Q96L96 1907 aa22.37■■□□□ 1.17
SPPL3-208ENST00000543854 E7EWF7 191 aa22.36■■□□□ 1.17
SPPL3-208ENST00000543854 POTEB2H3BUK9 544 aa22.36■■□□□ 1.17
SPPL3-208ENST00000543854 EVI5O60447 810 aa22.36■■□□□ 1.17
SPPL3-208ENST00000543854 GOLGA8HP0CJ92 632 aa22.36■■□□□ 1.17
SPPL3-208ENST00000543854 CASC1Q6TDU7 716 aa22.36■■□□□ 1.17
SPPL3-208ENST00000543854 MAMDC4Q6UXC1 1216 aa22.36■■□□□ 1.17
SPPL3-208ENST00000543854 NR2E3Q9Y5X4 410 aa22.36■■□□□ 1.17
SPPL3-208ENST00000543854 ERICH2A1L162 156 aa22.35■■□□□ 1.17
SPPL3-208ENST00000543854 H0YGN5 161 aa22.35■■□□□ 1.17
SPPL3-208ENST00000543854 DNM1LO00429 736 aa22.35■■□□□ 1.17
SPPL3-208ENST00000543854 TAL1P17542 331 aaPredicted RBP22.35■■□□□ 1.17
SPPL3-208ENST00000543854 SART3Q15020 963 aaKnown RBP22.35■■□□□ 1.17
SPPL3-208ENST00000543854 MUM1L1Q5H9M0 696 aa22.35■■□□□ 1.17
SPPL3-208ENST00000543854 ANO1Q5XXA6 986 aa22.35■■□□□ 1.17
SPPL3-208ENST00000543854 LSG1Q9H089 658 aaKnown RBP22.35■■□□□ 1.17
SPPL3-208ENST00000543854 ANO2Q9NQ90 1003 aa22.35■■□□□ 1.17
SPPL3-208ENST00000543854 TAF6LQ9Y6J9 622 aa22.35■■□□□ 1.17
SPPL3-208ENST00000543854 WDR19Q8NEZ3 1342 aa22.34■■□□□ 1.17
SPPL3-208ENST00000543854 PARP1P09874 1014 aaKnown RBP22.34■■□□□ 1.17
SPPL3-208ENST00000543854 RARBP10826 455 aa22.34■■□□□ 1.17
SPPL3-208ENST00000543854 COL6A1P12109 1028 aa22.34■■□□□ 1.17
SPPL3-208ENST00000543854 SEC23AQ15436 765 aa22.34■■□□□ 1.17
SPPL3-208ENST00000543854 STOX1Q6ZVD7 989 aa22.34■■□□□ 1.17
SPPL3-208ENST00000543854 FAM133AQ8N9E0 248 aa22.34■■□□□ 1.17
SPPL3-208ENST00000543854 ARRDC4Q8NCT1 418 aa22.34■■□□□ 1.17
SPPL3-208ENST00000543854 FGD4Q96M96 766 aa22.34■■□□□ 1.17
SPPL3-208ENST00000543854 MCM3APO60318 1980 aa22.34■■□□□ 1.17
SPPL3-208ENST00000543854 IFIT3O14879 490 aaKnown RBP22.33■■□□□ 1.17
SPPL3-208ENST00000543854 CDC45O75419 566 aa22.33■■□□□ 1.17
SPPL3-208ENST00000543854 AKR1A1P14550 325 aa22.33■■□□□ 1.17
SPPL3-208ENST00000543854 NSMFQ6X4W1 530 aa22.33■■□□□ 1.17
SPPL3-208ENST00000543854 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.33■■□□□ 1.17
SPPL3-208ENST00000543854 CYP39A1Q9NYL5 469 aa22.33■■□□□ 1.17
SPPL3-208ENST00000543854 ZHX1Q9UKY1 873 aaPredicted RBP22.33■■□□□ 1.17
SPPL3-208ENST00000543854 KBTBD13C9JR72 458 aa22.32■■□□□ 1.16
SPPL3-208ENST00000543854 DHX16O60231 1041 aaKnown RBP22.32■■□□□ 1.16
SPPL3-208ENST00000543854 SNAI1O95863 264 aaPredicted RBP22.32■■□□□ 1.16
SPPL3-208ENST00000543854 MYCNP04198 464 aaPredicted RBP22.32■■□□□ 1.16
SPPL3-208ENST00000543854 ZNF865P0CJ78 1059 aaPredicted RBP22.32■■□□□ 1.16
SPPL3-208ENST00000543854 CNTN2Q02246 1040 aa22.32■■□□□ 1.16
SPPL3-208ENST00000543854 ARMCX2Q7L311 632 aa22.32■■□□□ 1.16
SPPL3-208ENST00000543854 UBA5Q9GZZ9 404 aa22.32■■□□□ 1.16
SPPL3-208ENST00000543854 CPVLQ9H3G5 476 aa22.32■■□□□ 1.16
SPPL3-208ENST00000543854 LRRC37A2A6NM11 1700 aa22.31■■□□□ 1.16
SPPL3-208ENST00000543854 SMCHD1A6NHR9 2005 aa22.31■■□□□ 1.16
SPPL3-208ENST00000543854 WTAPQ15007 396 aa22.31■■□□□ 1.16
SPPL3-208ENST00000543854 CDC37Q16543 378 aaPredicted RBP22.31■■□□□ 1.16
SPPL3-208ENST00000543854 GJC2Q5T442 439 aaPredicted RBP22.31■■□□□ 1.16
SPPL3-208ENST00000543854 XPNPEP3Q9NQH7 507 aa22.31■■□□□ 1.16
SPPL3-208ENST00000543854 LCTP09848 1927 aa22.31■■□□□ 1.16
SPPL3-208ENST00000543854 NFIBO00712 420 aa22.3■■□□□ 1.16
SPPL3-208ENST00000543854 CCDC144CPQ8IYA2 1237 aa22.3■■□□□ 1.16
SPPL3-208ENST00000543854 MB21D2Q8IYB1 491 aaPredicted RBP22.3■■□□□ 1.16
SPPL3-208ENST00000543854 C7orf61Q8IZ16 206 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms